View Redoxidase 7897

Entry information : BdiPrx132 (Bradi5g22650)

Entry ID	7897
Creation	2011-01-17 (Toky Ramarohetra)
Last sequence changes	2011-01-17 (Toky Ramarohetra)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2014-01-08 (Qiang Li)

Peroxidase information: BdiPrx132 (Bradi5g22650)

Name (synonym)

BdiPrx132 (Bradi5g22650)

Class

Class III peroxidase [Orthogroup: Prx017]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium

Organism

Brachypodium distachyon [TaxId: 15368 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	BdiPrx132 start..stop	S start..stop
OsPrx56	598	0	1..328	1..328
TaPrx182-1B	580	0	1..332	1..335
TaPrx182-1A	571	0	1..330	1..333
SiPrx50	541	0	1..328	1..347

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7897' 'join(24940123..24940338,24940414..24940602,24940890..24941058,24941556..24941983)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	24940123..24940338	214	N° 2	24940414..24940602	187	N° 3	24940890..24941058	167	N° 4	24941556..24941983	426
join(24940123..24940338,24940414..24940602,24940890..24941058,24941556..24941983 )

Literature and cross-references BdiPrx132 (Bradi5g22650)

DNA ref.	Phytozome 12: Bd5 (24940123..24941983)

Protein sequence: BdiPrx132 (Bradi5g22650)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	333 (317)
PWM (Da):	36614.5 (34705.4)
PI (pH):	8.21 (8.01)	Peptide Signal:	cut: 23 range:17-333

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MLYRLLFGFALPFVLQSSLVLSNPSGVRVGFYKYTCPNAEVIIRD
EMTKIISGVPSLAGPLLRMHFHDCFVNGCDGSILLNSTPGSPSEKESIPNLTLRGFGTIDLVKSKLEQACPGVVSCADILALVARDVVLLTKGPHWDVPTGRRDGMRSAKEDALNNLPPPFFDATQNLNQFFIPKGLDAKDQVVLLG
GHTLGTSHCSSFSDRLYNFSGTHMADPMLDKQYTRRLKTKCKPNDTTTLVEMDPGSFRTFDTSYYRVIAKGRALFTSDETLMLDPFTRDYVLRQAGVAGYPAEFFADFAASMVKMGNMQV
LTGAQGEIRKHCAFVNKMHIL

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 5, intron 1, 2 and 3), no EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCTTTACAGACTCCTCTTTGGATTTGCACTTCCTTTTGTCCTACAATCCTCCTTAGTGTTGAGCAATCCATCAGGGGTGAGGGTTGGCTTTTACAAATACACATGTCCGAATGCAGAG
GTCATTATACGTGATGAGATGACCAAGATCATCTCTGGTGTCCCAAGCCTTGCTGGCCCACTGCTTCGCATGCACTTCCATGACTGCTTTGTGAATATGTGTGTAGATATCTGACTGTGT
TCCAAGCTTATTCAGTACTTCAGAGATGTTACTAAATTTCTTGTTCTCTGCAGGGTTGTGATGGTTCTATTCTGCTGAATAGCACACCAGGATCACCATCTGAAAAGGAATCAATACCGA
ACCTCACCCTCCGGGGCTTTGGTACAATTGACCTTGTCAAGTCTAAGCTAGAGCAAGCCTGCCCTGGGGTGGTCTCCTGCGCTGATATCCTAGCTCTTGTAGCAAGGGATGTTGTACTAC
TGTGGTAAGAACTAAGAACTAGCATTCCTGTTAACTAATCTTGGTCCTTTGTTTAAGTAAGATAAATTGACATGTTTTAGGAAATTGGGGGGAATAGGCTGGGCTGGTTCAGGCCAGCAA
TGGTGGTAAACCCACTCAGTTTTAACCTTCAGCTGAATTTGACCATCTTTTATGTAATTACTGGACAGTACTGTCTCTCCCGCTGCTGACAATGACTGGAGTTGGACCTTTTTTCTTTGA
AATTATGACTGGAGTTGAACCTAGATTTATGACCTTTTTATTATGCAACAGACCAAAGGGCCTCATTGGGATGTTCCAACTGGGCGGAGAGACGGAATGAGATCGGCGAAGGAAGATGCT
TTGAACAATCTGCCTCCACCCTTTTTTGATGCCACTCAAAACCTGAATCAGTTCTTCATTCCTAAGGGCCTTGATGCAAAGGATCAGGTGGTTCTGCTAGAGGTATAAACTACTGCATCT
CTTTTTAGTTTATTTGAACTTTGCTGATCCCAACAAATCTCCAGTTGCAGTCTCCCCATAAAGGTGTTGTTTGTATACACTACTAAGCAACTTGTTAATCAAGCAAAGGTGGTGTATGCA
TTTACCAGGTCAACAGAGATGGGAAAAGACAAACTATGTCGTTTCCATTCCTAGTTATATTACACCATACAAAACCAAGGGTCGTCATTGTCTTTTAGAAAAACAAATCATACCTTTATA
TACGAGAATTAGTACATTTCATTCCTTTGTTGGCCATAACGACACTTATTTTGCACACGCAGATGAAAAGGAGAAGAAACCTCTATAGCTCATTTGTCCTTTGCAATTTCATTTTTGATT
ATCTCACATCCACAGAACATATATATGACTAAAATTTCTGACGCTGCAAATTTTGCGATTCAAACTCAGTAGGAAGCCATGGAAACTGACACGCACTATCTTTGTTCACGCATTGACAGG
GGGGCACACCCTTGGGACCTCCCACTGCTCTTCGTTCTCGGACCGGCTGTACAACTTCAGCGGCACGCACATGGCCGACCCAATGCTGGACAAGCAGTACACCCGGCGCCTGAAAACCAA
GTGCAAGCCCAACGACACGACGACGCTGGTGGAGATGGACCCTGGGAGCTTCAGGACGTTTGACACGAGCTACTACCGTGTCATTGCCAAGGGCAGGGCGCTCTTCACCTCTGACGAGAC
GCTCATGCTCGACCCTTTCACCAGGGACTACGTGCTGCGGCAGGCGGGCGTCGCCGGCTACCCAGCTGAGTTCTTCGCAGACTTCGCGGCGTCCATGGTGAAGATGGGGAACATGCAGGT
GCTCACCGGCGCACAGGGGGAGATCAGGAAGCACTGCGCCTTTGTGAATAAGATGCACATATTATAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCTTTACA GACTCCTCTT TGGATTTGCA CTTCCTTTTG TCCTACAATC CTCCTTAGTG TTGAGCAATC CATCAGGGGT GAGGGTTGGC TTTTACAAAT ACACATGTCC GAATGCAGAG GTCATTATAC GTGATGAGAT GACCAAGATC ATCTCTGGTG TCCCAAGCCT TGCTGGCCCA CTGCTTCGCA TGCACTTCCA TGACTGCTTT GTGAATGGTT GTGATGGTTC TATTCTGCTG AATAGCACAC CAGGATCACC ATCTGAAAAG GAATCAATAC CGAACCTCAC CCTCCGGGGC TTTGGTACAA TTGACCTTGT CAAGTCTAAG CTAGAGCAAG CCTGCCCTGG GGTGGTCTCC TGCGCTGATA TCCTAGCTCT TGTAGCAAGG GATGTTGTAC TACTGACCAA AGGGCCTCAT TGGGATGTTC CAACTGGGCG GAGAGACGGA ATGAGATCGG CGAAGGAAGA TGCTTTGAAC AATCTGCCTC CACCCTTTTT TGATGCCACT CAAAACCTGA ATCAGTTCTT CATTCCTAAG GGCCTTGATG CAAAGGATCA GGTGGTTCTG CTAGGGGGGC ACACCCTTGG GACCTCCCAC TGCTCTTCGT TCTCGGACCG GCTGTACAAC TTCAGCGGCA CGCACATGGC CGACCCAATG CTGGACAAGC AGTACACCCG GCGCCTGAAA ACCAAGTGCA AGCCCAACGA CACGACGACG CTGGTGGAGA TGGACCCTGG GAGCTTCAGG ACGTTTGACA CGAGCTACTA CCGTGTCATT GCCAAGGGCA GGGCGCTCTT CACCTCTGAC GAGACGCTCA TGCTCGACCC TTTCACCAGG GACTACGTGC TGCGGCAGGC GGGCGTCGCC GGCTACCCAG CTGAGTTCTT CGCAGACTTC GCGGCGTCCA TGGTGAAGAT GGGGAACATG CAGGTGCTCA CCGGCGCACA GGGGGAGATC AGGAAGCACT GCGCCTTTGT GAATAAGATG CACATATTAT AGCTCGGTTT ACGTGATAAT TACTTGCCTT AGTGGTTGGT TTCTGGACAT GTAGAATTAC TGTGGTTGTG TTTAAGTACA TTGTGTGCAC CATGTCTTCC TTCATCATTT GTATTGTTAT CTTGATGTCT TCAAATAAAT AAACTGTTTG CTTGGCTCAA TGAAATAAAC ATGCATCCCA GAGAACTGGG CTACCATTCC
C

Retrieve as FASTA