Entry information : AtPrx03 (At1g05260 / PER3 / Atp7a / Atperox7a / AtPRC / AtperoxP3 / Rarecold-inducibleprotein / RCI3A)
| Entry ID | 79 |
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| Creation | 2006-02-02 (Filippo Passardi) |
| Last sequence changes | 2015-06-02 (Christophe Dunand) |
| Sequence status | complete |
| Reviewer | Achraf Jemmat |
| Last annotation changes | 2015-11-09 (Achraf Jemmat) |
Peroxidase information: AtPrx03 (At1g05260 / PER3 / Atp7a / Atperox7a / AtPRC / AtperoxP3 / Rarecold-inducibleprotein / RCI3A)
| Name (synonym) | AtPrx03 (At1g05260 / PER3 / Atp7a / Atperox7a / AtPRC / AtperoxP3 / Rarecold-inducibleprotein / RCI3A) | ||||||||||||||||||||||||||||||||||||
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| Class | Class III peroxidase [Orthogroup: Prx007] | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis | ||||||||||||||||||||||||||||||||||||
| Organism | Arabidopsis thaliana [TaxId: 3702 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
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| Tissue types | Flowers Green siliques Roots Rosettes Siliques Stamen Abscission Zone |
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| Inducers | Cold stress Light growth |
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| Repressor | N/D |
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| Best BLASTp hits |
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| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '79' 'join(1529827..1530039,1530148..1530336,1530430..1530592,1530856..1531271)' |
Exons►
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Literature and cross-references AtPrx03 (At1g05260 / PER3 / Atp7a / Atperox7a / AtPRC / AtperoxP3 / Rarecold-inducibleprotein / RCI3A)
| Literature | REFERENCE 1 Llorente,F., Lopez-Cobollo,R.M., Catala,R., Martinez-Zapater,J.M. and Salinas,J. A novel cold-inducible gene from Arabidopsis, RCI3, encodes a peroxidase that constitutes a component for stress tolerance. Plant J. 32 (1), 13-24 (2002)
REFERENCE 2 Kim MJ, Ciani S, Schachtman DP. A peroxidase contributes to ROS production during Arabidopsis root response to potassium deficiency. Mol Plant. 2010 Mar;3(2):420-7. REFERENCE 3 Cai S, Lashbrook CC. Stamen abscission zone transcriptome profiling reveals new candidates for abscission control: enhanced retention of floral organs in transgenic plants overexpressing Arabidopsis ZINC FINGER PROTEIN2. Plant Physiol. 2008 Mar;146(3):1305-21 |
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| Protein ref. | UniProtKB: O23044 |
| DNA ref. | Phytozome 12: Chr1 (1529827..1531271) |
| mRNA ref. | GenBank: NM_100405.3 |
| Cluster/Prediction ref. | Phytozome Gene 12: 19649599 UniGene: At.23986 |
| Omic ref. | AtProteome: At1g05260 ATTED-II: At1g05260 e-FP Browser: At1g05260 ePlant: At1g05260 Genevestigator: At1g05260 TAIR: At1g05260 |
Protein sequence: AtPrx03 (At1g05260 / PER3 / Atp7a / Atperox7a / AtPRC / AtperoxP3 / Rarecold-inducibleprotein / RCI3A)
| Sequence Properties first value : protein second value (mature protein) |
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| Sequence Send to BLAST Send to Peroxiscan |
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| Remarks | Complete sequence from genomic (chromo 1, 3 introns), 5 cDNA and 21 ESTs. | ||||||||||||
| Promoter► Send to BLAST Send to cis Analysis |
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| Terminator +► Send to BLAST Send to cis Analysis |
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| DNA ► Send to BLAST |
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| CDS► Send to BLAST |
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| cDNA► Send to BLAST |
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