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Entry information : BdiPrx138 (Bradi5g27170)
Entry ID 7902
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx138 (Bradi5g27170)
Name (synonym) BdiPrx138 (Bradi5g27170)
Class Class III peroxidase    [Orthogroup: Prx252]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx138
start..stop		 S start..stop
TaPrx174-1D 383 6.66e-134 29..332 39..339
TaPrx174-1A 382 1.6e-133 2..332 3..339
TaPrx174-1B 374 1.88e-130 2..332 3..337
TaPrx175-1A 356 2.73e-123 9..330 7..341
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7902' 'complement(join(28055531..28056304,28056458..28056682))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 28056458..28056682 223 N° 2 28055531..28056304 772  
complement(join(28055531..28056304,28056458..28056682))


exon

Literature and cross-references BdiPrx138 (Bradi5g27170)
DNA ref. Phytozome 12:   Bd5 (28056682..28055531)
Protein sequence: BdiPrx138 (Bradi5g27170)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (306)
PWM (Da):   %s   35574.57 (32991.2) Transmb domain:   %s   i9-31o
PI (pH):   %s   5.32 (5.11) Peptide Signal:   %s   cut: 27 range:27-332
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAWSNANKAVLAMGLVAALLFPAATASSALSYDFHDNSCPNLLNM
VYNAVDAARQEDPGVVPGLLRITYHDCFPQGCDGSILLTGPNSEQKMPQNAGLRQSALDLIESIRDKVHLACGPTVSCADITNLATRVAVVQSGMPGYNVTLGRLDSLEPASAAQVAALPGPDLVVSELVDSFASRGLDTTDLVALSGAH
TIGKTSCRSLKKRWGENADFVDLLHSFCARYPEHKVDLDVISPNDFDNQYYINLQRGVGVLNSDMALVRDDPYIRNLVNGFARDQGWFFSQFSNSMSKLANLPPKLQGNDGEIRFSCSKR
NNGPMAADAHQGFSASA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, intron 1), no EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTGGAGCAATGCAAATAAGGCAGTGCTGGCCATGGGCCTCGTTGCCGCGCTGCTCTTCCCGGCAGCTACTGCATCGTCGGCCCTTTCCTATGACTTCCACGACAACTCGTGCCCG
AACCTGCTCAACATGGTTTACAATGCCGTGGACGCCGCCCGTCAGGAGGACCCCGGTGTCGTCCCCGGCCTGCTCCGCATCACTTACCACGACTGCTTTCCTCAGGTAACTAAGTGCAGC
GTTGTTGTCAGAAAGAAAAAAAGTGTTCATGACACTTGTTTTTGAAACTTCTAAACACGATTCGCATACACGTAAGGATGGGTTTTGCATGCCTGATATTTTGGCAAATTAATATGTAAA
CGTGATCATCTCTGCTAGGGGGTTGCGACGGGTCGATCCTGCTGACGGGGCCCAACAGCGAGCAGAAGATGCCGCAGAACGCGGGGCTACGACAGAGCGCGCTGGACCTCATCGAGAGCA
TCCGCGACAAGGTGCACCTCGCCTGCGGCCCCACCGTCTCGTGCGCCGACATCACCAACCTGGCCACCCGGGTGGCCGTCGTCCAGTCGGGGATGCCCGGCTACAACGTGACGCTGGGCC
GGCTCGACAGCCTGGAGCCCGCTTCGGCCGCCCAAGTGGCGGCCTTACCGGGCCCCGACTTGGTGGTGTCGGAGCTCGTCGACTCCTTCGCGAGCCGCGGCCTCGACACCACCGACCTGG
TGGCGCTCTCCGGCGCGCACACCATCGGGAAGACGAGCTGCCGCAGCTTGAAGAAGCGGTGGGGGGAGAACGCGGATTTCGTGGACCTGCTCCATAGCTTCTGCGCCAGGTACCCTGAGC
ACAAGGTGGACTTGGACGTGATCAGTCCCAACGATTTCGACAACCAGTACTACATCAACCTCCAGCGTGGTGTCGGGGTGCTCAACTCCGACATGGCGCTTGTCCGCGACGACCCCTACA
TCAGGAACTTGGTCAACGGCTTCGCCCGTGACCAGGGCTGGTTCTTTAGCCAGTTCAGCAACTCCATGAGCAAGCTGGCGAATCTGCCGCCCAAGCTGCAGGGAAACGACGGCGAGATCC
GATTCAGCTGCAGCAAGAGGAACAACGGACCCATGGCTGCCGACGCTCATCAGGGGTTTTCGGCCTCTGCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTGGAGCAATGCAAATAAGGCAGTGCTGGCCATGGGCCTCGTTGCCGCGCTGCTCTTCCCGGCAGCTACTGCATCGTCGGCCCTTTCCTATGACTTCCACGACAACTCGTGCCCG
AACCTGCTCAACATGGTTTACAATGCCGTGGACGCCGCCCGTCAGGAGGACCCCGGTGTCGTCCCCGGCCTGCTCCGCATCACTTACCACGACTGCTTTCCTCAGGGTTGCGACGGGTCG
ATCCTGCTGACGGGGCCCAACAGCGAGCAGAAGATGCCGCAGAACGCGGGGCTACGACAGAGCGCGCTGGACCTCATCGAGAGCATCCGCGACAAGGTGCACCTCGCCTGCGGCCCCACC
GTCTCGTGCGCCGACATCACCAACCTGGCCACCCGGGTGGCCGTCGTCCAGTCGGGGATGCCCGGCTACAACGTGACGCTGGGCCGGCTCGACAGCCTGGAGCCCGCTTCGGCCGCCCAA
GTGGCGGCCTTACCGGGCCCCGACTTGGTGGTGTCGGAGCTCGTCGACTCCTTCGCGAGCCGCGGCCTCGACACCACCGACCTGGTGGCGCTCTCCGGCGCGCACACCATCGGGAAGACG
AGCTGCCGCAGCTTGAAGAAGCGGTGGGGGGAGAACGCGGATTTCGTGGACCTGCTCCATAGCTTCTGCGCCAGGTACCCTGAGCACAAGGTGGACTTGGACGTGATCAGTCCCAACGAT
TTCGACAACCAGTACTACATCAACCTCCAGCGTGGTGTCGGGGTGCTCAACTCCGACATGGCGCTTGTCCGCGACGACCCCTACATCAGGAACTTGGTCAACGGCTTCGCCCGTGACCAG
GGCTGGTTCTTTAGCCAGTTCAGCAACTCCATGAGCAAGCTGGCGAATCTGCCGCCCAAGCTGCAGGGAAACGACGGCGAGATCCGATTCAGCTGCAGCAAGAGGAACAACGGACCCATG
GCTGCCGACGCTCATCAGGGGTTTTCGGCCTCTGCTTAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTGGA GCAATGCAAA TAAGGCAGTG CTGGCCATGG GCCTCGTTGC CGCGCTGCTC TTCCCGGCAG CTACTGCATC GTCGGCCCTT TCCTATGACT TCCACGACAA CTCGTGCCCG  AACCTGCTCA ACATGGTTTA CAATGCCGTG GACGCCGCCC GTCAGGAGGA CCCCGGTGTC GTCCCCGGCC TGCTCCGCAT CACTTACCAC GACTGCTTTC CTCAGGGTTG CGACGGGTCG  ATCCTGCTGA CGGGGCCCAA CAGCGAGCAG AAGATGCCGC AGAACGCGGG GCTACGACAG AGCGCGCTGG ACCTCATCGA GAGCATCCGC GACAAGGTGC ACCTCGCCTG CGGCCCCACC  GTCTCGTGCG CCGACATCAC CAACCTGGCC ACCCGGGTGG CCGTCGTCCA GTCGGGGATG CCCGGCTACA ACGTGACGCT GGGCCGGCTC GACAGCCTGG AGCCCGCTTC GGCCGCCCAA  GTGGCGGCCT TACCGGGCCC CGACTTGGTG GTGTCGGAGC TCGTCGACTC CTTCGCGAGC CGCGGCCTCG ACACCACCGA CCTGGTGGCG CTCTCCGGCG CGCACACCAT CGGGAAGACG  AGCTGCCGCA GCTTGAAGAA GCGGTGGGGG GAGAACGCGG ATTTCGTGGA CCTGCTCCAT AGCTTCTGCG CCAGGTACCC TGAGCACAAG GTGGACTTGG ACGTGATCAG TCCCAACGAT  TTCGACAACC AGTACTACAT CAACCTCCAG CGTGGTGTCG GGGTGCTCAA CTCCGACATG GCGCTTGTCC GCGACGACCC CTACATCAGG AACTTGGTCA ACGGCTTCGC CCGTGACCAG  GGCTGGTTCT TTAGCCAGTT CAGCAACTCC ATGAGCAAGC TGGCGAATCT GCCGCCCAAG CTGCAGGGAA ACGACGGCGA GATCCGATTC AGCTGCAGCA AGAGGAACAA CGGACCCATG 
GCTGCCGACG CTCATCAGGG GTTTTCGGCC TCTGCTTAAT ATGTTAAAGC ATGCCATGCG TGCATGTAGC AATAAAGAGC TAGCGATAGC TAGCCAGCCT ATATAT 

Retrieve as FASTA