Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
343 (316) |
| PWM (Da): |
35761.9 (33250.7) |
Transmb domain: |
i7-29o |
| PI (pH):
| 7.71 (7.31) |
Peptide Signal:
| cut: 28 range:28-343 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MASSSRSSGG ALAAMVTMAM LLSSAAAATT AALSPDFHAA NCPQLESIVL SSVQTALRNE IALAAGLLRI FFHDCFPQGC DASVYLKGRG TEQSMGPNAT LQPKALQLIE DIRAKVHAAC
GPVVSCADIS ALATRDAVIF SGGPSYSVPQ GQMDSLTPAA QNLVDGLPSP RTSSVSALAK AFRDKGLADI ADLVALSGAH TVGRTGCPFF SDRAGRMDDA FSRRLAANCS RQPAVKQNLD
VVTPDLFDNG YFMALVNGQG VFTSDMALIK DRATAPIVRQ FARSKDAFFQ QFAKSMAKLA ASPRPGGNVG EIRRSCFSRN PARVVETVDV EAGDEQDGFA ASA
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (chromo 5, no intron), 8 ESTs. Cultivar="Bd21".
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DNA ►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGAGCA GCAGCAGGAG CTCCGGTGGT GCACTAGCAG CCATGGTGAC CATGGCCATG CTGCTCTCTT CTGCCGCCGC CGCCACCACC GCCGCCCTCT CACCGGACTT CCACGCGGCC
AACTGCCCGC AGCTAGAGTC CATCGTGCTC AGCTCCGTGC AAACCGCCCT CCGTAACGAA ATCGCTCTCG CCGCCGGGCT CCTCCGGATC TTCTTCCACG ACTGCTTCCC GCAGGGCTGC
GACGCCTCTG TCTACCTCAA GGGCCGGGGC ACGGAGCAGT CCATGGGCCC CAACGCCACG CTCCAACCCA AGGCCCTTCA GCTCATCGAG GACATCCGGG CCAAGGTCCA CGCCGCGTGC
GGCCCGGTCG TCTCCTGCGC CGACATCTCG GCCCTGGCCA CCCGGGACGC CGTCATCTTC TCCGGCGGAC CCTCTTACAG TGTCCCCCAG GGCCAGATGG ACAGCTTAAC CCCTGCGGCC
CAGAACCTCG TCGATGGCCT CCCGTCCCCC AGGACGTCCA GCGTGTCCGC TCTCGCCAAG GCCTTCCGCG ACAAGGGGCT GGCCGACATC GCCGACCTCG TGGCGCTGTC CGGGGCGCAC
ACTGTCGGGA GGACAGGGTG CCCCTTCTTC TCCGACAGGG CCGGCCGGAT GGACGACGCG TTCTCGAGGC GGCTCGCGGC CAACTGCAGC CGGCAGCCGG CCGTGAAGCA GAACCTGGAC
GTGGTCACCC CGGACTTGTT CGACAACGGG TATTTCATGG CGCTGGTGAA CGGCCAGGGC GTGTTCACTT CCGACATGGC GCTCATCAAG GACCGGGCCA CGGCGCCCAT CGTGAGGCAG
TTTGCCAGGA GCAAGGACGC GTTCTTTCAG CAGTTTGCGA AATCCATGGC TAAGCTTGCT GCCTCGCCTA GGCCTGGTGG GAATGTCGGG GAGATCCGGC GCAGCTGCTT CAGCCGCAAC
CCGGCTCGCG TCGTCGAGAC CGTCGACGTC GAAGCCGGTG ATGAGCAGGA CGGCTTCGCG GCTTCGGCTT GA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGAGCA GCAGCAGGAG CTCCGGTGGT GCACTAGCAG CCATGGTGAC CATGGCCATG CTGCTCTCTT CTGCCGCCGC CGCCACCACC GCCGCCCTCT CACCGGACTT CCACGCGGCC
AACTGCCCGC AGCTAGAGTC CATCGTGCTC AGCTCCGTGC AAACCGCCCT CCGTAACGAA ATCGCTCTCG CCGCCGGGCT CCTCCGGATC TTCTTCCACG ACTGCTTCCC GCAGGGCTGC
GACGCCTCTG TCTACCTCAA GGGCCGGGGC ACGGAGCAGT CCATGGGCCC CAACGCCACG CTCCAACCCA AGGCCCTTCA GCTCATCGAG GACATCCGGG CCAAGGTCCA CGCCGCGTGC
GGCCCGGTCG TCTCCTGCGC CGACATCTCG GCCCTGGCCA CCCGGGACGC CGTCATCTTC TCCGGCGGAC CCTCTTACAG TGTCCCCCAG GGCCAGATGG ACAGCTTAAC CCCTGCGGCC
CAGAACCTCG TCGATGGCCT CCCGTCCCCC AGGACGTCCA GCGTGTCCGC TCTCGCCAAG GCCTTCCGCG ACAAGGGGCT GGCCGACATC GCCGACCTCG TGGCGCTGTC CGGGGCGCAC
ACTGTCGGGA GGACAGGGTG CCCCTTCTTC TCCGACAGGG CCGGCCGGAT GGACGACGCG TTCTCGAGGC GGCTCGCGGC CAACTGCAGC CGGCAGCCGG CCGTGAAGCA GAACCTGGAC
GTGGTCACCC CGGACTTGTT CGACAACGGG TATTTCATGG CGCTGGTGAA CGGCCAGGGC GTGTTCACTT CCGACATGGC GCTCATCAAG GACCGGGCCA CGGCGCCCAT CGTGAGGCAG
TTTGCCAGGA GCAAGGACGC GTTCTTTCAG CAGTTTGCGA AATCCATGGC TAAGCTTGCT GCCTCGCCTA GGCCTGGTGG GAATGTCGGG GAGATCCGGC GCAGCTGCTT CAGCCGCAAC
CCGGCTCGCG TCGTCGAGAC CGTCGACGTC GAAGCCGGTG ATGAGCAGGA CGGCTTCGCG GCTTCGGCTT GA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MASSSRSSGG AAAMVTMAMS SAAAATTAAS DHAAnCSVSS VTARnAAAGR HDCGCDASVY KGRGTSMGnA TKADRAKVHA ACGVVSCADS AATRDAVSGG SYSVGMDSTA AnVDGSRTSS
VSAAKARDKG ADADVASGAH TVGRTGCSDR AGRMDDASRR AAnCSRAVKn DVVTDDnGYM AVnGGVTSDM AKDRATAVRA RSKDAAKSMA KAASRGGnVG RRSCSRnARV VTVDVAGDDG
AASA
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Retrieve as FASTA
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