The peroxidases and oxidases database
Entry information : BdiAPx01 (Bradi1g16510)
Entry ID 7906
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-01-19 (Toky Ramarohetra (Scipio))
Peroxidase information: BdiAPx01 (Bradi1g16510)
Name (synonym) BdiAPx01 (Bradi1g16510)
Class Ascorbate peroxidase    [Orthogroup: APx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiAPx01
start..stop		 S start..stop
TaAPx04-1D 505 0 1..256 1..256
HvAPx03 503 0 1..256 1..256
TaAPx04-1B 499 0 1..256 1..254
TaAPx04-1A 505 0 1..256 153..408
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 13366543..13366664 122 N° 2 13366740..13366914 175 N° 3 13367004..13367069 66 N° 4 13368189..13368237 49
N° 5 13368577..13368662 86 N° 6 13368754..13368833 80 N° 7 13368963..13369065 103 N° 8 13369181..13369239 59
N° 9 13369337..13369367 31  
join(13366543..13366664,13366740..13366914,13367004..13367069,13368189..13368237 ,13368577..13368662,13368754..13368833,13368963..13369065,13369181..13369239,133 69337..13369367)


exon

Literature and cross-references BdiAPx01 (Bradi1g16510)
DNA ref. Phytozome 12:   Bd1 (13366543..13369367)
EST ref. GenBank:   DV480596.1 [5' end]   DV475156.1 [3' end]
Protein sequence: BdiAPx01 (Bradi1g16510)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   256 (296)
PWM (Da):   %s   27612.88 (32023.2)  
PI (pH):   %s   5.15 (7.55) Peptide Signal:   %s   cut: 22 range:22-317
Sequence 534
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAKCYPTVTDEYQTAVAKAKRKLRGLIAEKNCAPLMLRLAWHSAGTFDVATKTGGPFGTIKCPAELAHGANAGLDIAVRLLEPIKDQFPILSYADFYLAGVVAVEVTGGPEVPFHPGRQDKPEPPPEGRLPDATQGSDHLRQVFSTQMGLSDQDIVALSGGHTGRCHKERSGFEGAWTANPLIFDNSYFKELLSGEKEGLLQLPTDKTLLSDPAFRPLVDKYADEDAFFADYAEAHLKLSELGFGGYFEGCC

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 8 introns), 10 ESTs. Cultivar="Bd21-0".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCCAAGTGCTACCCAACAGTCACCGATGAGTACCAGACGGCCGTCGCCAAGGCCAAGCGCAAGCTCCGCGGCCTCATCGCCGAGAAGAACTGCGCCCCTCTCATGCTGCGCCTC
GCGTGCGTATATCTTCTCTCTTCTCTTCCGACCTCGCTAGACTAGAGTTGCTAGATCTGACCATTCTCTCTCTGCAGGTGGCACTCGGCGGGGACCTTCGACGTCGCCACCAAGACCGGC
GGCCCCTTCGGAACCATCAAGTGCCCCGCGGAGCTCGCGCACGGCGCCAACGCGGGCCTCGACATCGCCGTCAGGCTACTCGAGCCCATCAAGGACCAATTCCCCATCCTCTCCTACGCC
GACTTCTACCAGGTCAGCGATCCCATCCTCTCCTACGCCGAGATCTGGAATTTGTTCTACTTTTCTTAAATTTATTTTTTGCCTTTTATGCTCTGTGGCAGCTCGCTGGAGTCGTGGCCG
TCGAGGTGACCGGCGGACCTGAGGTTCCATTCCACCCGGGCAGACAGGTGACCATACTTTTCAATTTCCCTGCCCAACTGCGATTTCTCTACAGGGCCCGCTGTTTCGTTACTTTTACCT
GCCGCGACCTAAGATAGTAGTGCCAACCATTTCTCTATCGTGTATCATCATCATCATCATCATCATCATCATTATCTTTATCTTTAGAAACCATTTGGCATTGGTAGTTGGCCCAGAAGA
AATTATTTTAGGATGTTCTGATGGATAGATGCAAGACAATTAGTATGTTGTGATGGATTGGTGCAAGATGATTGTTGTCGCATCTGTCGATGTGCGATTATTTGTTATTTTATACATGAT
GCCAAGTTTGTTGCCATCTTCTGTCTATTTTCTTGTTTCTCAGGATCAGATTTATCTTCTTTTGTTCCATTCCACATTTGACTCTGATCTCTTAAGCTATAACTATCACAATAAATAAGA
TGGTATCTCATAAAGTTTCTGGTACACATGTGTTAGGTGTGGTAATGAGAGTTTAGAGGTGTTGTTGTTCTCTTCAAGTAAATCTGATTATTATGTCCTACTGGGGGTATAAATCATGTA
TGGCATGCATATCCTAACAACTACATTACATAGGAATATACCTTCTTATTGATGTCTTATGGTTTAGGTAAACAGCGTCAGTTTAGGGCTGGAAGTTCGCTTTCCCTTCACATTATATCT
TGCGTTTGTTGATCTATCTTCTGTGCACATTGTTTCTTATGCAACATTGTATTCATTTCTTTAGTTGCTCTGCACCCAAGTGTCACGCGATAATTGTGCTCCAACTTGCCAATTGATCCC
TATTTCTTCTTCTGTATAGATGTGAGAACATTGTTTATCTCTTCATATCCTTTGGTTAAACTATATATTTCTGTAGGTCACTCTTCTTTCTAGTAAGTAGCTACTGGTTGGGCATAATAA
TCAATATGATAGCTACGTGAAGGAACATGTACTGTTGTGTGTGATTGTGATTGAGTTAGAATCTGCATGTCTTCGTATTCTCATGATCCTTTCTAAAATATATTTTCATGCAAAATGACT
CAGTAGCACCAGTTTTCTTTCCCTGTGTGGGTGTATCCATGCAGTGTTAGTCATGGAGTTTTACGATGTGTTGTCTTTGTTTGTAGGACAAGCCTGAGCCTCCTCCAGAAGGCCGCCTTC
CTGATGCCACCCAAGGTACAACCGTGAAAACATGTCTTATTGCTTTGTTAATTTTGGTACTGTACCATTTATGCAAGGGTGGAATGCTTTTAAGAATGTTATAAAATATCATCGTTTAGC
ATTTCGCAGTGTTACGCAGTGGTGACATTTCTACGTTATGGTGGGCATAGTTTATTACAGAACACTCTCTACTTTCTTGAGGCTAATTATTTCATTTCTTTATATTGCAAATCCAATACC
AAAATGTTTGGCCGCTTCTGGGAGCTTTGTGTAACCTCCAAAATTCTAAAATTTTCCGAGCAGTATCTCTGAATATATGGCTAGGCTGACATGTTGATATTACTATTGTGTCAGGCTCTG
ACCACCTCAGGCAGGTATTTTCCACTCAGATGGGTTTGAGCGACCAGGACATTGTTGCGCTTTCTGGTGGTCACACCCTGGTTGGTCCAATTGTGCAATTAGCATATTTGTGTCATGCTT
GTTTGTAGGCTTGAAGAGTCCTGCTTATGCAGCTTCAATTATCATGTGCAGGGAAGGTGCCACAAGGAAAGATCTGGCTTTGAGGGAGCGTGGACTGCCAACCCTTTGATCTTTGACAAC
TCGTACTTCAAGTAAGAGTGATATCTGCTTTTTGAAAGCATGCGGCCTGTTTATTTGTATAAGAGTCCAAGCTGCCTCCGTGTTTTTTCCTGTTCATGATGTTCTTTTTTCCTCAACCGA
AAGTTTATATATCTTGACAGGGAGCTCCTGAGTGGCGAGAAGGAAGGCCTTCTTCAGTTGCCGACTGACAAAACCCTCCTGTCCGACCCGGCCTTCCGCCCACTCGTGGATAAATATGCT
GCGGTACACCCTTGATCCTGGTTTCTTGTGTAGTTCTAGTTCACTGTTGGGTGGCTACCCCACCAATCCAGTACTGTATAAGCTTATCTGAGACATTTGATGCTGGTTAATGTTGCAGGA
TGAGGATGCTTTCTTTGCTGACTATGCTGAGGCACACCTGAAGCTCTCTGAGTTGGGGTAAGTAACACGATCATCGTTCTCGTTGATGCATCATTGAAATGACTTGCTAGCGCAACATTG
TCAGAAAGTAGACCCCCTTGTTGATTGTTTCCAGATTTGGCGGGTACTTCGAAGGTTGTTGCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCCAAGTGCTACCCAACAGTCACCGATGAGTACCAGACGGCCGTCGCCAAGGCCAAGCGCAAGCTCCGCGGCCTCATCGCCGAGAAGAACTGCGCCCCTCTCATGCTGCGCCTC
GCGTGGCACTCGGCGGGGACCTTCGACGTCGCCACCAAGACCGGCGGCCCCTTCGGAACCATCAAGTGCCCCGCGGAGCTCGCGCACGGCGCCAACGCGGGCCTCGACATCGCCGTCAGG
CTACTCGAGCCCATCAAGGACCAATTCCCCATCCTCTCCTACGCCGACTTCTACCAGCTCGCTGGAGTCGTGGCCGTCGAGGTGACCGGCGGACCTGAGGTTCCATTCCACCCGGGCAGA
CAGGACAAGCCTGAGCCTCCTCCAGAAGGCCGCCTTCCTGATGCCACCCAAGGCTCTGACCACCTCAGGCAGGTATTTTCCACTCAGATGGGTTTGAGCGACCAGGACATTGTTGCGCTT
TCTGGTGGTCACACCCTGGGAAGGTGCCACAAGGAAAGATCTGGCTTTGAGGGAGCGTGGACTGCCAACCCTTTGATCTTTGACAACTCGTACTTCAAGGAGCTCCTGAGTGGCGAGAAG
GAAGGCCTTCTTCAGTTGCCGACTGACAAAACCCTCCTGTCCGACCCGGCCTTCCGCCCACTCGTGGATAAATATGCTGCGGATGAGGATGCTTTCTTTGCTGACTATGCTGAGGCACAC
CTGAAGCTCTCTGAGTTGGGATTTGGCGGGTACTTCGAAGGTTGTTGCTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CCGCCCACAT TCAATTCAAT TCCCCATCGC GCAGCCATGG CCGCCAAGTG CTACCCAACA GTCACCGATG AGTACCAGAC GGCCGTCGCC AAGGCCAAGC GCAAGCTCCG CGGCCTCATC  GCCGAGAAGA ACTGCGCCCC TCTCATGCTG CGCCTCGCGT GGCACTCGGC GGGGACCTTC GACGTCGCCA CCAAGACCGG CGGCCCCTTC GGAACCATCA AGTGCCCCGC GGAGCTCGCG  CACGGCGCCA ACGCGGGCCT CGACATCGCC GTCAGGCTAC TCGAGCCCAT CAAGGACCAA TTCCCCATCC TCTCCTACGC CGACTTCTAC CAGCTCGCTG GAGTCGTGGC CGTCGAGGTG  ACCGGCGGAC CTGAGGTTCC ATTCCACCCG GGCAGACAGG ACAAGCCTGA GCCTCCTCCA GAAGGCCGCC TTCCTGATGC CACCCAAGGC TCTGACCACC TCAGGCAGGT ATTTTCCACT  CAGATGGGTT TGAGCGACCA GGACATTGTT GCGCTTTCTG GTGGTCACAC CCTGGGAAGG TGCCACAAGG AAAGATCTGG CTTTGAGGGA GCGTGGACTG CCAACCCTTT GATCTTTGAC  AACTCGTACT TCAAGGAGCT CCTGAGTGGC GAGAAGGAAG GCCTTCTTCA GTTGCCGACT GACAAAACCC TCCTGTCCGA CCCGGCCTTC CGCCCACTCG TGGATAAATA TGCTGCGGAT  GAGGATGCTT TCTTTGCTGA CTATGCTGAG GCACACCTGA AGCTCTCTGA GTTGGGATTT GGCGGGTACT TCGAAGGTTG TTGCTGATTC TGGTTTGGTG CATGAAGTTG GTATGAAGGC  GAAGAAGAAG AATAAAATTG TGGGCCTGAG GCCATGTGAT GTGTTGTTTG GATTTGGTTA GATGGACGTT GGAATTCCAT TGTGTTGCTT GCTTGACATC TATGAGCATA TTGTTGGAGG  GACGATGGAA ATGTTATGTA ACTTACCTGT TCCCTCCGTC TAAGATGAAC CGGAAATTTG TTTACCCTCT GTCGGCTGGG TTCATTTCTG GAACCAAATT TCACTGTTTT AATTATTTTG  TCTTGGTGTC AGCTTGTTTG TTCACGACCA TTCGTGCATC TTTTTTTGTT TCTTGTCAAA TAGTTTTTAC ACTTATAAAG ATTTTACACT CACAAAGATT TGAGTTTACA TTTGTAAAGA  TCTGAGTTGG TGGTCGCGAG TTCATTCTAA CAAGACAACT ACTTAAGGCT ATAGGAATCA TCTAATTGTG ACTCATTTTA TACGTATCAT GATCTTTTGA CTATGGTTGA TTGGTTTTCA 
TGACTTTCAA GAGTAATTGT ATTTTTCAAA AATAATAT 

Retrieve as FASTA