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Entry information : BdiAPx01 (Bradi1g16510)
Entry ID 7906
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-01-19 (Toky Ramarohetra (Scipio))
Peroxidase information: BdiAPx01 (Bradi1g16510)
Name (synonym) BdiAPx01 (Bradi1g16510)
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiAPx01
start..stop		 S start..stop
TaAPx04-1D 505 0 1..256 1..256
TaAPx04-1A 505 0 1..256 153..408
HvAPx03 503 0 1..256 1..256
TaAPx04-1B 499 0 1..256 1..254
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7906' 'join(13366543..13366664,13366740..13366914,13367004..13367069,13368189..13368237,13368577..13368662,13368754..13368833,13368963..13369065,13369181..13369239,13369337..13369367)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 13366543..13366664 120 N° 2 13366740..13366914 173 N° 3 13367004..13367069 64 N° 4 13368189..13368237 47
N° 5 13368577..13368662 84 N° 6 13368754..13368833 78 N° 7 13368963..13369065 101 N° 8 13369181..13369239 57
N° 9 13369337..13369367 29  
join(13366543..13366664,13366740..13366914,13367004..13367069,13368189..13368237 ,13368577..13368662,13368754..13368833,13368963..13369065,13369181..13369239,133 69337..13369367)


exon

Literature and cross-references BdiAPx01 (Bradi1g16510)
DNA ref. Phytozome 12:   Bd1 (13366543..13369367)
EST ref. GenBank:   DV480596.1 [5' end]  DV475156.1 [3' end]
Protein sequence: BdiAPx01 (Bradi1g16510)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   256
PWM (Da):   %s   27612.88  
PI (pH):   %s   5.15
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAKCYPTVTDEYQTAVAKAKRKLRGLIAEKNCAPLMLRLAWHSAGTFDVATKTGGPFGTIKCPAELAHGANAGLDIAVRLLEPIKDQFPILSYADFYLAGVVAVEVTGGPEVPFHPGRQDKPEPPPEGRLPDATQGSDHLRQVFSTQMGLSDQDIVALSGGHTGRCHKERSGFEGAWTANPLIFDNSYFKELLSGEKEGLLQLPTDKTLLSDPAFRPLVDKYADEDAFFADYAEAHLKL
SELGFGGYFEGCC

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 8 introns), 10 ESTs. Cultivar="Bd21-0".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCCAAGTGCTACCCAACAGTCACCGATGAGTACCAGACGGCCGTCGCCAAGGCCAAGCGCAAGCTCCGCGGCCTCATCGCCGAGAAGAACTGCGCCCCTCTCATGCTGCGCCTC
GCGCGTGCGTATATCTTCTCTCTTCTCTTCCGACCTCGCTAGACTAGAGTTGCTAGATCTGACCATTCTCTCTCTGCAGGTGGCACTCGGCGGGGACCTTCGACGTCGCCACCAAGACCG
GCGGCCCCTTCGGAACCATCAAGTGCCCCGCGGAGCTCGCGCACGGCGCCAACGCGGGCCTCGACATCGCCGTCAGGCTACTCGAGCCCATCAAGGACCAATTCCCCATCCTCTCCTACG
CCGACTTCTACCAGAGGTCAGCGATCCCATCCTCTCCTACGCCGAGATCTGGAATTTGTTCTACTTTTCTTAAATTTATTTTTTGCCTTTTATGCTCTGTGGCAGCTCGCTGGAGTCGTG
GCCGTCGAGGTGACCGGCGGACCTGAGGTTCCATTCCACCCGGGCAGACAGAGGTGACCATACTTTTCAATTTCCCTGCCCAACTGCGATTTCTCTACAGGGCCCGCTGTTTCGTTACTT
TTACCTGCCGCGACCTAAGATAGTAGTGCCAACCATTTCTCTATCGTGTATCATCATCATCATCATCATCATCATCATTATCTTTATCTTTAGAAACCATTTGGCATTGGTAGTTGGCCC
AGAAGAAATTATTTTAGGATGTTCTGATGGATAGATGCAAGACAATTAGTATGTTGTGATGGATTGGTGCAAGATGATTGTTGTCGCATCTGTCGATGTGCGATTATTTGTTATTTTATA
CATGATGCCAAGTTTGTTGCCATCTTCTGTCTATTTTCTTGTTTCTCAGGATCAGATTTATCTTCTTTTGTTCCATTCCACATTTGACTCTGATCTCTTAAGCTATAACTATCACAATAA
ATAAGATGGTATCTCATAAAGTTTCTGGTACACATGTGTTAGGTGTGGTAATGAGAGTTTAGAGGTGTTGTTGTTCTCTTCAAGTAAATCTGATTATTATGTCCTACTGGGGGTATAAAT
CATGTATGGCATGCATATCCTAACAACTACATTACATAGGAATATACCTTCTTATTGATGTCTTATGGTTTAGGTAAACAGCGTCAGTTTAGGGCTGGAAGTTCGCTTTCCCTTCACATT
ATATCTTGCGTTTGTTGATCTATCTTCTGTGCACATTGTTTCTTATGCAACATTGTATTCATTTCTTTAGTTGCTCTGCACCCAAGTGTCACGCGATAATTGTGCTCCAACTTGCCAATT
GATCCCTATTTCTTCTTCTGTATAGATGTGAGAACATTGTTTATCTCTTCATATCCTTTGGTTAAACTATATATTTCTGTAGGTCACTCTTCTTTCTAGTAAGTAGCTACTGGTTGGGCA
TAATAATCAATATGATAGCTACGTGAAGGAACATGTACTGTTGTGTGTGATTGTGATTGAGTTAGAATCTGCATGTCTTCGTATTCTCATGATCCTTTCTAAAATATATTTTCATGCAAA
ATGACTCAGTAGCACCAGTTTTCTTTCCCTGTGTGGGTGTATCCATGCAGTGTTAGTCATGGAGTTTTACGATGTGTTGTCTTTGTTTGTAGGACAAGCCTGAGCCTCCTCCAGAAGGCC
GCCTTCCTGATGCCACCCAAGAGGTACAACCGTGAAAACATGTCTTATTGCTTTGTTAATTTTGGTACTGTACCATTTATGCAAGGGTGGAATGCTTTTAAGAATGTTATAAAATATCAT
CGTTTAGCATTTCGCAGTGTTACGCAGTGGTGACATTTCTACGTTATGGTGGGCATAGTTTATTACAGAACACTCTCTACTTTCTTGAGGCTAATTATTTCATTTCTTTATATTGCAAAT
CCAATACCAAAATGTTTGGCCGCTTCTGGGAGCTTTGTGTAACCTCCAAAATTCTAAAATTTTCCGAGCAGTATCTCTGAATATATGGCTAGGCTGACATGTTGATATTACTATTGTGTC
AGGCTCTGACCACCTCAGGCAGGTATTTTCCACTCAGATGGGTTTGAGCGACCAGGACATTGTTGCGCTTTCTGGTGGTCACACCCTGTGGTTGGTCCAATTGTGCAATTAGCATATTTG
TGTCATGCTTGTTTGTAGGCTTGAAGAGTCCTGCTTATGCAGCTTCAATTATCATGTGCAGGGAAGGTGCCACAAGGAAAGATCTGGCTTTGAGGGAGCGTGGACTGCCAACCCTTTGAT
CTTTGACAACTCGTACTTCAAAAGTAAGAGTGATATCTGCTTTTTGAAAGCATGCGGCCTGTTTATTTGTATAAGAGTCCAAGCTGCCTCCGTGTTTTTTCCTGTTCATGATGTTCTTTT
TTCCTCAACCGAAAGTTTATATATCTTGACAGGGAGCTCCTGAGTGGCGAGAAGGAAGGCCTTCTTCAGTTGCCGACTGACAAAACCCTCCTGTCCGACCCGGCCTTCCGCCCACTCGTG
GATAAATATGCTGCGCGGTACACCCTTGATCCTGGTTTCTTGTGTAGTTCTAGTTCACTGTTGGGTGGCTACCCCACCAATCCAGTACTGTATAAGCTTATCTGAGACATTTGATGCTGG
TTAATGTTGCAGGATGAGGATGCTTTCTTTGCTGACTATGCTGAGGCACACCTGAAGCTCTCTGAGTTGGGGGGTAAGTAACACGATCATCGTTCTCGTTGATGCATCATTGAAATGACT
TGCTAGCGCAACATTGTCAGAAAGTAGACCCCCTTGTTGATTGTTTCCAGATTTGGCGGGTACTTCGAAGGTTGTTGCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCCAAGTGCTACCCAACAGTCACCGATGAGTACCAGACGGCCGTCGCCAAGGCCAAGCGCAAGCTCCGCGGCCTCATCGCCGAGAAGAACTGCGCCCCTCTCATGCTGCGCCTC
GCGTGGCACTCGGCGGGGACCTTCGACGTCGCCACCAAGACCGGCGGCCCCTTCGGAACCATCAAGTGCCCCGCGGAGCTCGCGCACGGCGCCAACGCGGGCCTCGACATCGCCGTCAGG
CTACTCGAGCCCATCAAGGACCAATTCCCCATCCTCTCCTACGCCGACTTCTACCAGCTCGCTGGAGTCGTGGCCGTCGAGGTGACCGGCGGACCTGAGGTTCCATTCCACCCGGGCAGA
CAGGACAAGCCTGAGCCTCCTCCAGAAGGCCGCCTTCCTGATGCCACCCAAGGCTCTGACCACCTCAGGCAGGTATTTTCCACTCAGATGGGTTTGAGCGACCAGGACATTGTTGCGCTT
TCTGGTGGTCACACCCTGGGAAGGTGCCACAAGGAAAGATCTGGCTTTGAGGGAGCGTGGACTGCCAACCCTTTGATCTTTGACAACTCGTACTTCAAGGAGCTCCTGAGTGGCGAGAAG
GAAGGCCTTCTTCAGTTGCCGACTGACAAAACCCTCCTGTCCGACCCGGCCTTCCGCCCACTCGTGGATAAATATGCTGCGGATGAGGATGCTTTCTTTGCTGACTATGCTGAGGCACAC
CTGAAGCTCTCTGAGTTGGGATTTGGCGGGTACTTCGAAGGTTGTTGCTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CCGCCCACAT TCAATTCAAT TCCCCATCGC GCAGCCATGG CCGCCAAGTG CTACCCAACA GTCACCGATG AGTACCAGAC GGCCGTCGCC AAGGCCAAGC GCAAGCTCCG CGGCCTCATC  GCCGAGAAGA ACTGCGCCCC TCTCATGCTG CGCCTCGCGT GGCACTCGGC GGGGACCTTC GACGTCGCCA CCAAGACCGG CGGCCCCTTC GGAACCATCA AGTGCCCCGC GGAGCTCGCG  CACGGCGCCA ACGCGGGCCT CGACATCGCC GTCAGGCTAC TCGAGCCCAT CAAGGACCAA TTCCCCATCC TCTCCTACGC CGACTTCTAC CAGCTCGCTG GAGTCGTGGC CGTCGAGGTG  ACCGGCGGAC CTGAGGTTCC ATTCCACCCG GGCAGACAGG ACAAGCCTGA GCCTCCTCCA GAAGGCCGCC TTCCTGATGC CACCCAAGGC TCTGACCACC TCAGGCAGGT ATTTTCCACT  CAGATGGGTT TGAGCGACCA GGACATTGTT GCGCTTTCTG GTGGTCACAC CCTGGGAAGG TGCCACAAGG AAAGATCTGG CTTTGAGGGA GCGTGGACTG CCAACCCTTT GATCTTTGAC  AACTCGTACT TCAAGGAGCT CCTGAGTGGC GAGAAGGAAG GCCTTCTTCA GTTGCCGACT GACAAAACCC TCCTGTCCGA CCCGGCCTTC CGCCCACTCG TGGATAAATA TGCTGCGGAT  GAGGATGCTT TCTTTGCTGA CTATGCTGAG GCACACCTGA AGCTCTCTGA GTTGGGATTT GGCGGGTACT TCGAAGGTTG TTGCTGATTC TGGTTTGGTG CATGAAGTTG GTATGAAGGC  GAAGAAGAAG AATAAAATTG TGGGCCTGAG GCCATGTGAT GTGTTGTTTG GATTTGGTTA GATGGACGTT GGAATTCCAT TGTGTTGCTT GCTTGACATC TATGAGCATA TTGTTGGAGG  GACGATGGAA ATGTTATGTA ACTTACCTGT TCCCTCCGTC TAAGATGAAC CGGAAATTTG TTTACCCTCT GTCGGCTGGG TTCATTTCTG GAACCAAATT TCACTGTTTT AATTATTTTG  TCTTGGTGTC AGCTTGTTTG TTCACGACCA TTCGTGCATC TTTTTTTGTT TCTTGTCAAA TAGTTTTTAC ACTTATAAAG ATTTTACACT CACAAAGATT TGAGTTTACA TTTGTAAAGA  TCTGAGTTGG TGGTCGCGAG TTCATTCTAA CAAGACAACT ACTTAAGGCT ATAGGAATCA TCTAATTGTG ACTCATTTTA TACGTATCAT GATCTTTTGA CTATGGTTGA TTGGTTTTCA 
TGACTTTCAA GAGTAATTGT ATTTTTCAAA AATAATAT 

Retrieve as FASTA