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Entry information : BdiPrx98 (Bradi3g09100)
Entry ID 7916
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx98 (Bradi3g09100)
Name (synonym) BdiPrx98 (Bradi3g09100)
Class Class III peroxidase    [Orthogroup: Prx374]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx98
start..stop		 S start..stop
OsPrx25 480 4.35e-172 28..334 30..338
OsPrx87 433 1.27e-153 32..334 30..327
BdiPrx24 424 2.72e-150 34..334 24..318
OsPrx88 421 5.95e-149 30..334 20..318
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7916' 'join(7201705..7202709)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 7201705..7202709 1003  
join(7201705..7202709)


exon

Literature and cross-references BdiPrx98 (Bradi3g09100)
DNA ref. Phytozome 12:   Bd3 (7201705..7202709)
Protein sequence: BdiPrx98 (Bradi3g09100)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334 (306)
PWM (Da):   %s   33661.97 (30858.4) Transmb domain:   %s   i12-34o
PI (pH):   %s   8.65 (8.40) Peptide Signal:   %s   cut: 29 range:29-334
Sequence
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MAAFVISSAR ISTLAVALLV ATTISCRGAG VAAATLSNKY YDKTCPGLQP IVRSAMAQAV AADPRTGASV LRLFFHDCFV NGCDGSVLLD DAPPGFTGEK GAGPNLGSAR GFEAVDAAKA  QAEAACNATV SCADVLALAA RDAVGLLGGP AWAVKLGRKD SRTASQAAAN ANLPGPGSGL SSLLASFAAK GLSARDMTAL SGAHTVGRAR CLTFRARVNG GDAGVNATFA ARIRQGCPAT 
NGVGDSSLAP LDGETPDAFD NGYFRGLLQQ RGLLHSDQEL FSGGGGSQDS LVRKYAGNAG MFASDFARAM VKMGGLEPAA GTPLEVRINC RKPN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 3, no intron), no EST.
DNA ►
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ATGGCCGCCT TCGTCATTTC TTCGGCGAGG ATCTCCACGC TCGCGGTTGC TCTCCTCGTC GCCACCACGA TCTCCTGCCG AGGCGCCGGA GTCGCGGCGG CCACACTGTC GAACAAGTAC  TACGACAAGA CGTGCCCGGG GCTGCAGCCC ATCGTGCGGT CGGCGATGGC GCAGGCGGTG GCCGCGGATC CCCGCACGGG CGCCTCCGTG CTCCGGCTCT TCTTCCACGA CTGCTTCGTC  AACGGCTGCG ACGGCTCCGT GCTCCTGGAC GACGCGCCGC CGGGGTTCAC GGGCGAGAAG GGCGCCGGGC CGAACCTGGG CTCCGCGCGG GGCTTCGAGG CCGTGGACGC GGCCAAGGCG  CAGGCCGAGG CGGCCTGCAA CGCCACCGTG TCCTGCGCGG ACGTGCTCGC GCTGGCAGCC CGCGACGCCG TGGGCCTGCT CGGCGGGCCG GCGTGGGCCG TCAAGCTGGG CCGGAAGGAC  TCGCGCACCG CGAGCCAGGC CGCGGCCAAC GCCAACCTTC CCGGGCCTGG GTCCGGCCTA TCCTCGCTGC TGGCCTCGTT CGCGGCCAAG GGGCTGTCGG CGCGGGACAT GACGGCGCTG  TCCGGCGCGC ACACGGTGGG GCGCGCGCGG TGCCTGACGT TCCGGGCCCG CGTCAACGGC GGGGACGCCG GCGTCAATGC CACCTTCGCG GCGCGGATCC GGCAGGGATG CCCGGCGACC  AACGGCGTTG GGGACAGCAG CCTGGCGCCG CTGGACGGGG AGACGCCGGA CGCGTTCGAC AACGGGTACT TCCGGGGTCT CCTGCAGCAG CGCGGGCTGC TGCACTCGGA CCAGGAGCTC  TTCAGCGGCG GCGGCGGGTC GCAGGACTCG CTGGTGCGCA AGTACGCCGG CAACGCGGGC ATGTTCGCGA GCGACTTCGC CAGGGCGATG GTTAAGATGG GCGGCCTTGA GCCCGCGGCC 
GGGACGCCGC TGGAAGTCAG GATCAACTGT CGGAAGCCCA ACTAG 

Retrieve as FASTA  
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCGCCT TCGTCATTTC TTCGGCGAGG ATCTCCACGC TCGCGGTTGC TCTCCTCGTC GCCACCACGA TCTCCTGCCG AGGCGCCGGA GTCGCGGCGG CCACACTGTC GAACAAGTAC  TACGACAAGA CGTGCCCGGG GCTGCAGCCC ATCGTGCGGT CGGCGATGGC GCAGGCGGTG GCCGCGGATC CCCGCACGGG CGCCTCCGTG CTCCGGCTCT TCTTCCACGA CTGCTTCGTC  AACGGCTGCG ACGGCTCCGT GCTCCTGGAC GACGCGCCGC CGGGGTTCAC GGGCGAGAAG GGCGCCGGGC CGAACCTGGG CTCCGCGCGG GGCTTCGAGG CCGTGGACGC GGCCAAGGCG  CAGGCCGAGG CGGCCTGCAA CGCCACCGTG TCCTGCGCGG ACGTGCTCGC GCTGGCAGCC CGCGACGCCG TGGGCCTGCT CGGCGGGCCG GCGTGGGCCG TCAAGCTGGG CCGGAAGGAC  TCGCGCACCG CGAGCCAGGC CGCGGCCAAC GCCAACCTTC CCGGGCCTGG GTCCGGCCTA TCCTCGCTGC TGGCCTCGTT CGCGGCCAAG GGGCTGTCGG CGCGGGACAT GACGGCGCTG  TCCGGCGCGC ACACGGTGGG GCGCGCGCGG TGCCTGACGT TCCGGGCCCG CGTCAACGGC GGGGACGCCG GCGTCAATGC CACCTTCGCG GCGCGGATCC GGCAGGGATG CCCGGCGACC  AACGGCGTTG GGGACAGCAG CCTGGCGCCG CTGGACGGGG AGACGCCGGA CGCGTTCGAC AACGGGTACT TCCGGGGTCT CCTGCAGCAG CGCGGGCTGC TGCACTCGGA CCAGGAGCTC  TTCAGCGGCG GCGGCGGGTC GCAGGACTCG CTGGTGCGCA AGTACGCCGG CAACGCGGGC ATGTTCGCGA GCGACTTCGC CAGGGCGATG GTTAAGATGG GCGGCCTTGA GCCCGCGGCC 
GGGACGCCGC TGGAAGTCAG GATCAACTGT CGGAAGCCCA ACTAG 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCGCCT TCGTCATTTC TTCGGCGAGG ATCTCCACGC TCGCGGTTGC TCTCCTCGTC GCCACCACGA TCTCCTGCCG AGGCGCCGGA GTCGCGGCGG CCACACTGTC GAACAAGTAC  TACGACAAGA CGTGCCCGGG GCTGCAGCCC ATCGTGCGGT CGGCGATGGC GCAGGCGGTG GCCGCGGATC CCCGCACGGG CGCCTCCGTG CTCCGGCTCT TCTTCCACGA CTGCTTCGTC  AACGGCTGCG ACGGCTCCGT GCTCCTGGAC GACGCGCCGC CGGGGTTCAC GGGCGAGAAG GGCGCCGGGC CGAACCTGGG CTCCGCGCGG GGCTTCGAGG CCGTGGACGC GGCCAAGGCG  CAGGCCGAGG CGGCCTGCAA CGCCACCGTG TCCTGCGCGG ACGTGCTCGC GCTGGCAGCC CGCGACGCCG TGGGCCTGCT CGGCGGGCCG GCGTGGGCCG TCAAGCTGGG CCGGAAGGAC  TCGCGCACCG CGAGCCAGGC CGCGGCCAAC GCCAACCTTC CCGGGCCTGG GTCCGGCCTA TCCTCGCTGC TGGCCTCGTT CGCGGCCAAG GGGCTGTCGG CGCGGGACAT GACGGCGCTG  TCCGGCGCGC ACACGGTGGG GCGCGCGCGG TGCCTGACGT TCCGGGCCCG CGTCAACGGC GGGGACGCCG GCGTCAATGC CACCTTCGCG GCGCGGATCC GGCAGGGATG CCCGGCGACC  AACGGCGTTG GGGACAGCAG CCTGGCGCCG CTGGACGGGG AGACGCCGGA CGCGTTCGAC AACGGGTACT TCCGGGGTCT CCTGCAGCAG CGCGGGCTGC TGCACTCGGA CCAGGAGCTC  TTCAGCGGCG GCGGCGGGTC GCAGGACTCG CTGGTGCGCA AGTACGCCGG CAACGCGGGC ATGTTCGCGA GCGACTTCGC CAGGGCGATG GTTAAGATGG GCGGCCTTGA GCCCGCGGCC  GGGACGCCGC TGGAAGTCAG GATCAACTGT CGGAAGCCCA ACTAGGTGGA GTAGCTACGT AGGTTTGCAC CGTTGATTGA CATGTAAATA TTTAGTATGC AAAAGGACAC GATCGAGAGT 
AACACATACT CGATATTCAT TTTTGTCGAT ACATCCAGAT CCAGGAAAGA AATTTGCAAT TGCCGATCAT TTGTCAGATA AAGACATACT CAGAACGTAC ATTTCACAG 

Retrieve as FASTA