1. Browse the Database
  2. View Redoxidase
Entry information : BdiPrx99 (Bradi3g09120)
Entry ID 7917
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx99 (Bradi3g09120)
Name (synonym) BdiPrx99 (Bradi3g09120)
Class Class III peroxidase    [Orthogroup: Prx045]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx99
start..stop		 S start..stop
HvPrx13 550 0 2..319 6..322
SiPrx77 537 0 6..319 7..320
HvPrx15 533 0 4..319 7..322
TaPrx50-1D 531 0 2..319 6..322
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7917' 'join(7215738..7215944,7216082..7216273,7216404..7216964)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 7215738..7215944 205 N° 2 7216082..7216273 190 N° 3 7216404..7216964 559  
join(7215738..7215944,7216082..7216273,7216404..7216964)


exon

Literature and cross-references BdiPrx99 (Bradi3g09120)
DNA ref. Phytozome 12:   Bd3 (7215738..7216964)
EST ref. GenBank:   DV477851.1 [5' end]
Protein sequence: BdiPrx99 (Bradi3g09120)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   319 (297)
PWM (Da):   %s   34246.34 (31791.1) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.26 (8.21) Peptide Signal:   %s   cut: 23 range:23-319
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MACRSTWHCLLALFLLFSAAYGQLSPTFYARSCPTLQLIVRATMI
KALLAERRMGASLLRLHFHDCFVQGCDASILLDDVGSFVGEKTAGPNVRSVRGYEVIDEIKANVELLCPGVVSCADIVALAARDGTLLLGGPTWQVPLGRRDSTTASFAEANSDLPAPTSSLNALIAAFAKKNLSARDMTALSG
AHTIGFSQCQNFRGHIYNDTNIDPAFATLRKRSCPAAAPNGDGNLAPFDVQTQLAFDNAYYGNLLVRRGLLHSDQELFNGASQDALVRQYSANPALFNSDFAAAMIQMGKFRPLTGTAGQ
IRRNCKVVNS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 3, no intron), 1 EST. Cultivar="Bd21".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTGCAGGAGTACGTGGCATTGTTTGCTCGCCCTCTTCCTCCTCTTCTCCGCCGCGTATGGGCAGCTCTCGCCGACGTTCTACGCCAGGAGCTGCCCGACACTGCAGCTCATCGTG
CGCGCCACCATGATCAAGGCGCTCCTCGCCGAGCGCCGCATGGGGGCCTCCCTCCTAAGGCTCCACTTCCATGACTGCTTCGTTCAAAAGTAATCATGATTTAATTAACGCTTAGCCGAA
CATCTGTCTGTATTCAGTATAGCCCGCTGTAGAGCCAACCTTACGTAAATACGTGCACTTTAAGCATTGATTGATGTGAAATTTGGTTGATTACGTACATATATAGGGCTGCGACGCATC
CATTCTTCTGGACGACGTGGGGAGCTTCGTGGGCGAGAAGACTGCCGGCCCTAACGTGAGATCGGTACGCGGCTACGAGGTCATCGACGAGATCAAGGCGAACGTGGAGCTCCTCTGCCC
CGGCGTCGTCTCCTGCGCCGACATCGTCGCCCTCGCCGCAAGGGACGGCACCCTTCTGTGGTACGTACAGATATGGACATGGACACGTGCGTGCATAAATTAGATAGAAGCTAGTCATGC
ATACACGCAACTAGCTACCTAGTGTGCATGTGAGGATTAATTAAATTCATCACCGGTCGTTTGCATGCAGCTCGGCGGGCCCACGTGGCAGGTGCCGCTCGGCCGGCGCGACTCAACGAC
GGCGAGCTTCGCCGAGGCCAACTCGGACCTCCCGGCGCCGACATCGAGCCTCAACGCTCTCATCGCGGCGTTCGCCAAGAAGAACCTGAGCGCGCGGGACATGACGGCGCTCTCGGGCGC
GCACACCATCGGCTTCTCGCAGTGCCAGAACTTCCGCGGCCACATCTACAACGACACAAACATCGACCCGGCGTTCGCCACGCTCCGGAAGCGCAGCTGCCCCGCCGCGGCGCCAAACGG
CGACGGCAACCTGGCCCCCTTCGACGTGCAGACGCAGCTCGCCTTCGACAACGCCTACTACGGCAACCTGCTCGTCAGGCGCGGGCTCCTGCACTCGGACCAGGAACTCTTCAACGGCGC
CTCCCAGGACGCGCTCGTCAGGCAGTACAGCGCCAACCCGGCGCTCTTCAACTCCGACTTCGCCGCGGCCATGATACAGATGGGGAAATTCAGGCCGCTCACCGGGACGGCCGGACAGAT
CAGGCGCAACTGCAAGGTCGTCAACAGCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTGCAGGAGTACGTGGCATTGTTTGCTCGCCCTCTTCCTCCTCTTCTCCGCCGCGTATGGGCAGCTCTCGCCGACGTTCTACGCCAGGAGCTGCCCGACACTGCAGCTCATCGTG
CGCGCCACCATGATCAAGGCGCTCCTCGCCGAGCGCCGCATGGGGGCCTCCCTCCTAAGGCTCCACTTCCATGACTGCTTCGTTCAAGGCTGCGACGCATCCATTCTTCTGGACGACGTG
GGGAGCTTCGTGGGCGAGAAGACTGCCGGCCCTAACGTGAGATCGGTACGCGGCTACGAGGTCATCGACGAGATCAAGGCGAACGTGGAGCTCCTCTGCCCCGGCGTCGTCTCCTGCGCC
GACATCGTCGCCCTCGCCGCAAGGGACGGCACCCTTCTGCTCGGCGGGCCCACGTGGCAGGTGCCGCTCGGCCGGCGCGACTCAACGACGGCGAGCTTCGCCGAGGCCAACTCGGACCTC
CCGGCGCCGACATCGAGCCTCAACGCTCTCATCGCGGCGTTCGCCAAGAAGAACCTGAGCGCGCGGGACATGACGGCGCTCTCGGGCGCGCACACCATCGGCTTCTCGCAGTGCCAGAAC
TTCCGCGGCCACATCTACAACGACACAAACATCGACCCGGCGTTCGCCACGCTCCGGAAGCGCAGCTGCCCCGCCGCGGCGCCAAACGGCGACGGCAACCTGGCCCCCTTCGACGTGCAG
ACGCAGCTCGCCTTCGACAACGCCTACTACGGCAACCTGCTCGTCAGGCGCGGGCTCCTGCACTCGGACCAGGAACTCTTCAACGGCGCCTCCCAGGACGCGCTCGTCAGGCAGTACAGC
GCCAACCCGGCGCTCTTCAACTCCGACTTCGCCGCGGCCATGATACAGATGGGGAAATTCAGGCCGCTCACCGGGACGGCCGGACAGATCAGGCGCAACTGCAAGGTCGTCAACAGCTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AAGCAAAAGC CACTGATCAG CTAACTATCG CACAGTGCAG TGTGGTGAAG AACACTGAAC ACACACTCAG TTTGCGTAGC TAGATAAAGG TTTGTGAGCT TATTAGCCAT GGCTTGCAGG  AGTACGTGGC ATTGTTTGCT CGCCCTCTTC CTCCTCTTCT CCGCCGCGTA TGGGCAGCTC TCGCCGACGT TCTACGCCAG GAGCTGCCCG ACACTGCAGC TCATCGTGCG CGCCACCATG  ATCAAGGCGC TCCTCGCCGA GCGCCGCATG GGGGCCTCCC TCCTAAGGCT CCACTTCCAT GACTGCTTCG TTCAAGGCTG CGACGCATCC ATTCTTCTGG ACGACGTGGG GAGCTTCGTG  GGCGAGAAGA CTGCCGGCCC TAACGTGAGA TCGGTACGCG GCTACGAGGT CATCGACGAG ATCAAGGCGA ACGTGGAGCT CCTCTGCCCC GGCGTCGTCT CCTGCGCCGA CATCGTCGCC  CTCGCCGCAA GGGACGGCAC CCTTCTGCTC GGCGGGCCCA CGTGGCAGGT GCCGCTCGGC CGGCGCGACT CAACGACGGC GAGCTTCGCC GAGGCCAACT CGGACCTCCC GGCGCCGACA  TCGAGCCTCA ACGCTCTCAT CGCGGCGTTC GCCAAGAAGA ACCTGAGCGC GCGGGACATG ACGGCGCTCT CGGGCGCGCA CACCATCGGC TTCTCGCAGT GCCAGAACTT CCGCGGCCAC  ATCTACAACG ACACAAACAT CGACCCGGCG TTCGCCACGC TCCGGAAGCG CAGCTGCCCC GCCGCGGCGC CAAACGGCGA CGGCAACCTG GCCCCCTTCG ACGTGCAGAC GCAGCTCGCC  TTCGACAACG CCTACTACGG CAACCTGCTC GTCAGGCGCG GGCTCCTGCA CTCGGACCAG GAACTCTTCA ACGGCGCCTC CCAGGACGCG CTCGTCAGGC AGTACAGCGC CAACCCGGCG  CTCTTCAACT CCGACTTCGC CGCGGCCATG ATACAGATGG GGAAATTCAG GCCGCTCACC GGGACGGCCG GACAGATCAG GCGCAACTGC AAGGTCGTCA ACAGCTGATC AATCGTCGTC  GTCTCATTAT AAACTTCACA GTGCTAAGTG TGCAACGTGA GCATGCGTAC AAGTAAGTAC GATATGTGGT GATGGACATG CATGTGTATA GTTTGGTTGG CTACAAAGGA ACCCAACCAT  GCAAGCAGCT TGCATGCGTG GATGGAAAAA ATAAGAGATG TACGGTTGGT TCAAATAATT CCTGGGGTTC AAAAGTGAGT AACCCTGCTT CCAGGTTGTA AGATACCTTT GTGCCTGATC  ATGTAATTGG CTCTCGCCGT CCTATATTAA GTGACTATAT ATTTCATATA TCTAGATGCC TTTTAGTTAT AGATACATGC ATATTTAGAC AAATTTGAGT AACTTAATAT GGGACGGAGG 
GAGTATAAGG AAACAA 

Retrieve as FASTA