Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
496 (467) |
PWM (Da): |
50302.5 (47298.0) |
Transmb domain: |
i7-29o |
PI (pH): |
9.01 (8.80) |
Peptide Signal: |
cut: 30 range:30-496 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MGTGRRPQWGVMFMCLALVLSALAAVASSQSPLPAPPARRAAVPS FPPAASRAPKRASGPALSPAPKPASPPSASPAPKPTPRPAASPAPKPSSPLPAPKPPSPPAPAQAPKPSAPPAAS PVPKPPSPPPMPSPSRAPKPSPSAPAPAPAQKPSPAPAPAP KASPPTTTPTPVLKPSVPSPAPPPSPANSAPPTSSPALSPSFYAASCPSVELAVNDVVRSASTLDPTIPGKLLRMVFHDCFVEGCDASVLIEGSGTERTDPANLSLGGFNVIDEAKRLLEAVCPATVSCSDIIVLAARDAVTYTGGPSVPVSLGRRDSLVSLASNVRANIIDTGFSVDAMAASFASKGLTLDDLVTLSG GHTIGSAHCGTFRERFHPDANGSMVPVDASMNTDYANELMQTCSSGNSTVTVDCDEGSAKVFDNRYFSNLLDGRGLLRTDAVLVQNATTRAKVSAFAQSQESFFASWAGSYARLTSLGVK TGSDGEIRRLCSSVNG |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 3, intron 1, 2 and 3), no EST. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGTACGGGTCGGAGGCCGCAATGGGGAGTCATGTTCATGTGCTTGGCGCTGGTCTTGTCGGCGCTTGCGGCGGTCGCCTCGTCTCAGTCGCCGCTTCCGGCGCCGCCGGCTCGAAGA GCAGCCGTACCGTCGTTTCCACCAGCGGCGTCGCGGGCTCCGAAGCGGGCGTCCGGGCCAGCGTTGTCGCCTGCGCCAAAGCCAGCGTCTCCCCCATCGGCTTCGCCGGCTCCCAAGCCG ACACCTAGGCCCGCGGCTTCTCCAGCGCCAAAGCCATCGTCTCCACTTCCGGCGCCAAAGCCGCCATCTCCACCCGCGCCGGCGCAGGCGCCGAAGCCATCGGCTCCACCTGCAGCGTCG CCGGTTCCGAAGCCACCATCTCCACCACCCATGCCGTCGCCATCGCGGGCTCCAAAGCCATCACCCTCAGCGCCGGCGCCGGCTCCGGCTCAAAAACCATCTCCCGCACCGGCACCCGCC CCGAAAGCGTCTCCTCCTACGACGACCCCGACACCAGTACTGAAACCATCTGTTCCATCTCCGGCACCGCCGCCGTCTCCGGCGAACTCTGCCCCGCCGACGTCTTCGCCGGCGCTCTCG CCCAGCTTCTACGCCGCCTCCTGCCCGAGCGTGGAGCTGGCGGTGAACGATGTCGTCAGGTCGGCCTCCACCTTGGACCCCACCATCCCCGGCAAGCTCCTCAGGATGGTCTTCCATGAC TGCTTCGTAGAGGTAATGGAAAGATTTCGAGTACTCTATTTACTCCACTTGCATTTTGGAAATGTGTTTTACTTGGCGTTCTTGATGTTGGCACACCCTTGTGCTAGATCTAGGATTCAA TTAATCTGGTATTTCCAGAAAATTATCCTGACGTCATGGCGTTGGAGCATTGCCTCGTGCGTTCAGCGGTGGCCGCAGTAGCTCACTGATGACTAATGTGACATTTTATTCCGATGTGCC TTGTCATGATCCTTCCCCCCTTCACTACATGAATCTCCAAACAGTTTTTTCTCTTACCCTGCCCATAGTTTCCTGAGGAAACAGTGACGCAAGTGAATGGTATGCCGGACCTATTTCATT TTGCGTCCATTAATAATGTCGATTGATCCTCTGATCAACAGAATGATCTGGAACTTTTTCTTTAGGAAACGCAATTTTACTAATTGAGCTACATAGGTATATCAGTGAGCCCCCAAACTT CAACTCGCCTGATACATAGTAGTCTTTGACATGCTACATGCGTGCAACTGATGGCACCTTACAGTTTCAGTTCATCATGTTTCTGAAAGCGCATATGGACAACGGCAGGAATTTATTTAT TTATTTGCGATCAACGGCAGGAATAATTTTAACTGTGTAATTTTCTTTATCTCAGGGGGATGCGATGCGTCGGTGCTGATCGAAGGCAGCGGCACGGAGAGGACCGATCCCGCAAACCTC TCGCTGGGCGGGTTCAATGTCATTGATGAAGCCAAGAGGCTGCTCGAAGCTGTATGCCCTGCAACCGTTTCTTGCAGTGACATTATAGTCCTTGCTGCAAGAGATGCTGTCACATATGTA AGTATCAATGCACCTACCCAAACCCATTGCCCTAATACACTTCGCTGCAGTTTGTGCTTTCTCTTAATTCTCATAAAATTTAAATGTGCTGATAATTGATACATGAATCTGCTTAGAGAA ATGGTAGTACTAAGCAGGAGTACTTGGTGGACATAGGACATCATAAACTGTCATTGAATGCTGCAACAATCTGATCTTGTACCATCCAATGAATCAAGCGCTCACGGTCCCATATGTAGC AATGACTAGTTAATTAGTAAGCCTGTCTAATGATTACATCCAAATACAATGGGGAGGGAGATCCTGAAGAGCTTCCATATAAGTGAGCAACTGAGCATAATCCCAACTTATGTTGGGACC TGGCCTTTGTATGTGCATGATTTGTATGGCACATGACTGATGGTCCTAAGGGCAAAGGACAAGTAGACATAATTGGAATTCTGAAGCTTGACAACGGATGTGCTTTTGGAAGTTGGAATT GACTATGCATTTGCTAATTTCAGGCCAGTAGAGTTGCTGAAACATCCACCATTTCACCTATCTGTTAGTTTTAGATACAGTAGATGATCTGGTGAGATGACAGTAAAAATAAGGCTGCAC GTTATTTTTTGCATGGCTAATCTCCGTTCTTGACGAGAAAAGAAGCAACTAAGCTGAAGAACTAATGCAGGCTGCTATACGCCTGTGTACACTTCATGGGTATAGAAATGCAAAATGTTT TGAGTGGTACTAGTTCATCAACTGATGTTTGATTATATGTTTGTTCCAAACTAGACACCGGAGGACCGTCGGTGCCCGTCTCTCTCGGGCGACGTGATAGCCTTGTCTCGCTAGCCTCCA ATGTCAGAGCAAACATCATTGACACGGGCTTCTCCGTCGACGCTATGGCGGCGAGCTTCGCCTCGAAGGGCCTCACCTTGGACGACCTCGTCACTCTCTCAGGTACATTCACAACCCTGC TCAGAGTAAAACAGCAGTTGGCTACACTGGCACTGTGGAATCATCTCACACCAGCACTACCGCTTATGCAGGCGCGGGCACACCATCGGGTCAGCGCACTGCGGCACATTCCGGGAGCGC TTCCATCCTGACGCCAATGGAAGCATGGTGCCCGTTGATGCATCAATGAACACCGACTACGCGAACGAGCTGATGCAGACCTGCTCATCGGGGAACAGCACCGTGACGGTGGACTGCGAC GAGGGGTCGGCGAAGGTGTTCGACAACCGGTACTTCAGCAACCTGCTGGACGGGCGTGGCCTGCTGCGCACGGACGCCGTGCTGGTGCAGAACGCCACGACGAGGGCCAAGGTGTCGGCC TTCGCGCAGAGTCAGGAGAGCTTCTTCGCCAGCTGGGCCGGCTCGTACGCCAGGCTCACCAGCCTCGGCGTCAAGACAGGATCCGACGGCGAGATCCGGCGGCTCTGCTCCAGCGTCAAC GGCTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGTACGGGTCGGAGGCCGCAATGGGGAGTCATGTTCATGTGCTTGGCGCTGGTCTTGTCGGCGCTTGCGGCGGTCGCCTCGTCTCAGTCGCCGCTTCCGGCGCCGCCGGCTCGAAGA GCAGCCGTACCGTCGTTTCCACCAGCGGCGTCGCGGGCTCCGAAGCGGGCGTCCGGGCCAGCGTTGTCGCCTGCGCCAAAGCCAGCGTCTCCCCCATCGGCTTCGCCGGCTCCCAAGCCG ACACCTAGGCCCGCGGCTTCTCCAGCGCCAAAGCCATCGTCTCCACTTCCGGCGCCAAAGCCGCCATCTCCACCCGCGCCGGCGCAGGCGCCGAAGCCATCGGCTCCACCTGCAGCGTCG CCGGTTCCGAAGCCACCATCTCCACCACCCATGCCGTCGCCATCGCGGGCTCCAAAGCCATCACCCTCAGCGCCGGCGCCGGCTCCGGCTCAAAAACCATCTCCCGCACCGGCACCCGCC CCGAAAGCGTCTCCTCCTACGACGACCCCGACACCAGTACTGAAACCATCTGTTCCATCTCCGGCACCGCCGCCGTCTCCGGCGAACTCTGCCCCGCCGACGTCTTCGCCGGCGCTCTCG CCCAGCTTCTACGCCGCCTCCTGCCCGAGCGTGGAGCTGGCGGTGAACGATGTCGTCAGGTCGGCCTCCACCTTGGACCCCACCATCCCCGGCAAGCTCCTCAGGATGGTCTTCCATGAC TGCTTCGTAGAGGGATGCGATGCGTCGGTGCTGATCGAAGGCAGCGGCACGGAGAGGACCGATCCCGCAAACCTCTCGCTGGGCGGGTTCAATGTCATTGATGAAGCCAAGAGGCTGCTC GAAGCTGTATGCCCTGCAACCGTTTCTTGCAGTGACATTATAGTCCTTGCTGCAAGAGATGCTGTCACATATACCGGAGGACCGTCGGTGCCCGTCTCTCTCGGGCGACGTGATAGCCTT GTCTCGCTAGCCTCCAATGTCAGAGCAAACATCATTGACACGGGCTTCTCCGTCGACGCTATGGCGGCGAGCTTCGCCTCGAAGGGCCTCACCTTGGACGACCTCGTCACTCTCTCAGGC GGGCACACCATCGGGTCAGCGCACTGCGGCACATTCCGGGAGCGCTTCCATCCTGACGCCAATGGAAGCATGGTGCCCGTTGATGCATCAATGAACACCGACTACGCGAACGAGCTGATG CAGACCTGCTCATCGGGGAACAGCACCGTGACGGTGGACTGCGACGAGGGGTCGGCGAAGGTGTTCGACAACCGGTACTTCAGCAACCTGCTGGACGGGCGTGGCCTGCTGCGCACGGAC GCCGTGCTGGTGCAGAACGCCACGACGAGGGCCAAGGTGTCGGCCTTCGCGCAGAGTCAGGAGAGCTTCTTCGCCAGCTGGGCCGGCTCGTACGCCAGGCTCACCAGCCTCGGCGTCAAG ACAGGATCCGACGGCGAGATCCGGCGGCTCTGCTCCAGCGTCAACGGCTGA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGCCGCTCCC GTCGTCAATG CCAAAACAGC AGTAAACGCG CTTTGGCCTT TGGAGCGTGT CACATTAGAT TCTCCGGCCG GGCCAGCATC AGCAGTTGTT TCCTAGCGAC CCACCCAGCG
CTCTCTAGCT AGCTCCTTCT CGCTGCCGCG GTAGATACTG GACTTGTTCT CGCAGGCAGC AGGCGGCGGT GAACTCGTGT GGGCGAGGTC TTGGCTCGCG AGCTTCGTTC ACGCCTTATA
CTCGCTGGTG CATGATACTC GGGCCACCGG AGTATCTTCC GTGATGGGTA CGGGTCGGAG GCCGCAATGG GGAGTCATGT TCATGTGCTT GGCGCTGGTC TTGTCGGCGC TTGCGGCGGT
CGCCTCGTCT CAGTCGCCGC TTCCGGCGCC GCCGGCTCGA AGAGCAGCCG TACCGTCGTT TCCACCAGCG GCGTCGCGGG CTCCGAAGCG GGCGTCCGGG CCAGCGTTGT CGCCTGCGCC
AAAGCCAGCG TCTCCCCCAT CGGCTTCGCC GGCTCCCAAG CCGACACCTA GGCCCGCGGC TTCTCCAGCG CCAAAGCCAT CGTCTCCACT TCCGGCGCCA AAGCCGCCAT CTCCACCCGC
GCCGGCGCAG GCGCCGAAGC CATCGGCTCC ACCTGCAGCG TCGCCGGTTC CGAAGCCACC ATCTCCACCA CCCATGCCGT CGCCATCGCG GGCTCCAAAG CCATCACCCT CAGCGCCGGC
GCCGGCTCCG GCTCAAAAAC CATCTCCCGC ACCGGCACCC GCCCCGAAAG CGTCTCCTCC TACGACGACC CCGACACCAG TACTGAAACC ATCTGTTCCA TCTCCGGCAC CGCCGCCGTC
TCCGGCGAAC TCTGCCCCGC CGACGTCTTC GCCGGCGCTC TCGCCCAGCT TCTACGCCGC CTCCTGCCCG AGCGTGGAGC TGGCGGTGAA CGATGTCGTC AGGTCGGCCT CCACCTTGGA
CCCCACCATC CCCGGCAAGC TCCTCAGGAT GGTCTTCCAT GACTGCTTCG TAGAGGGATG CGATGCGTCG GTGCTGATCG AAGGCAGCGG CACGGAGAGG ACCGATCCCG CAAACCTCTC
GCTGGGCGGG TTCAATGTCA TTGATGAAGC CAAGAGGCTG CTCGAAGCTG TATGCCCTGC AACCGTTTCT TGCAGTGACA TTATAGTCCT TGCTGCAAGA GATGCTGTCA CATATACCGG
AGGACCGTCG GTGCCCGTCT CTCTCGGGCG ACGTGATAGC CTTGTCTCGC TAGCCTCCAA TGTCAGAGCA AACATCATTG ACACGGGCTT CTCCGTCGAC GCTATGGCGG CGAGCTTCGC
CTCGAAGGGC CTCACCTTGG ACGACCTCGT CACTCTCTCA GGCGGGCACA CCATCGGGTC AGCGCACTGC GGCACATTCC GGGAGCGCTT CCATCCTGAC GCCAATGGAA GCATGGTGCC
CGTTGATGCA TCAATGAACA CCGACTACGC GAACGAGCTG ATGCAGACCT GCTCATCGGG GAACAGCACC GTGACGGTGG ACTGCGACGA GGGGTCGGCG AAGGTGTTCG ACAACCGGTA
CTTCAGCAAC CTGCTGGACG GGCGTGGCCT GCTGCGCACG GACGCCGTGC TGGTGCAGAA CGCCACGACG AGGGCCAAGG TGTCGGCCTT CGCGCAGAGT CAGGAGAGCT TCTTCGCCAG
CTGGGCCGGC TCGTACGCCA GGCTCACCAG CCTCGGCGTC AAGACAGGAT CCGACGGCGA GATCCGGCGG CTCTGCTCCA GCGTCAACGG CTGATGGATC GAGTAGCGAT CACAGATTCT
GGATGATGTA ACATGTAATA CAAATACATA GGGATCGGAT GTATTAGCAG CGAGCTGGGG GAATTAGATC GATTCGTTTG TTCTTCTTGT AGCCGATGAC CGAGTCTTTC TTTGTGTAGG
CCGCCGCATG TAGAGGGCGG CAAGCGGCAT TGCGTTTTAC CTGCAACAGA AAATACCAAA TTAAGCCCAA TAAAATGATG CTCCGTTCAA GTATTTGAA
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Retrieve as FASTA
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