Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
176 |
| PWM (Da): |
19059.16 |
|
| PI (pH):
| 4.72 |
|
Sequence 248
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
PPNNKSARGFPAVDAAKAALEDACPAVVSCESAIAAEISVELLGGPSWGVLLGRLDSKTSDYNGSLNHTAPTDNLTIFSYVQQPQPQRCRPCRPFSECQSVVNRLYNFSNTGLLDPTMDFANLEFLSQRCPRNGNGSALNDVDPTTPDTFHTNHYYTNIEVNRGFLNSDQELKSSP |
Retrieve as FASTA
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|
| Remarks |
Pseudogene from genomic (chromo 1). Part of exon 2, 3 and 4 including several frame shift. |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CCGCCCAACAACAAATCGGCGCGTGGGTTCCCGGCGGTGGACGCCGCCAAGGCCGCGTTAGAGGACGCCTGCCCTGCGGTTGTCTCCTGCGAGTCNGCCATCGCCGCTGAGATCTCCGTC
GAGCTGGTACGTACACGTACGTACCTGCATGCATGCAGTGCAGCGATACAAAATTCATGGCATATACATGAAGCAATACTGTGATAGTATAGAGGACGTAGCGGTAGCCGGTAGCTGCAC
CATGGCTTTCAAATTAAGGGGCATGCATAGTGATTTAACCGTTAACAGCATGCAATTACTTCATTATTGGCACCTTTTCGTTTAATTTGGAGGATGAATGATTTGATGGGCGCCCACACG
GTGCATATTGCTGTGCTATAGTAACATGTCATGTCAGGTCGTTTTTCATGATTATATATGCATGGTTCTGGTATGTACACCTTCGATAACAAAAAGCGTCAAAATATTTCTAGTGAAATG
ACGTCAATATTTTTAAAAAACAATTTGGATTTGTTTGAATTTCGTCCGATATTAATGAAATTTCGTATTTACACTAGTAAAAAAAGCACTACGCTTGCGGTGGAATATAATTTGTACAGG
CGGTTCGAATTAAACAGCATTTGTGGAGAGAAATCTTGCCCGACTAAAAAAACCGCCTGTGAAAATCAATTTTCACCGACGGTTTTCCTAACAAAACCACCAATAGAAATCATCTATTTC
TGCATACGGTTCTCCTAAGAAACCGCCAGTGAAAATCGTATTTCCATTGGCGGTTTCTTAAAAAATGCCTGTAGAAATAATTTGAAATTGAATTTTTTGAGCTTTTCAAATGACCTCTTT
TAGAAAAACCGTCAAAATGAAAGTTGTAGTTCTCGAAAAGTTATGAAACTTTGTAGTTGATAAGTTTTCCATTTGAAATCATCTTGTCGTCGAAAACTACGTTTGAATTTCTCAAATTTG
AAATTCAAATTTTGTAAATGACCTCGTATGGAGAAATTACCAATATAAAAGTTGTAGATCTTGAAAAGTTGTGAAACTTTGTAACTGGCAATTTTTTCACTGGAATCCGTTTAGGGCCTT
AAATAATCAATATATGCTCGGTTTAGGATAATATGTGGGGAACGAAACTGTAATATAGACACAATTAAGTGATAGGTGGAGTGGTAGAGGAGGCTACGCGCGAGGGCGAGATCTCAGGTT
TGAATCCCACCAGCCAGCCGTGTAGCACGTGATTTTACGCGAAACAATGCGCGACTTGCGACTTCCCTATAATTTATTTTTTTCTATTTTTAAAAGCCGATTTTGTATTTTGTATAAAAA
AATTTCTAACGGTTGACATAACTGAACCGTCTGTAGAAATACATTTGCATTAACGGCTCTCAATTACCCGCCTGTGGAAAAAATATTTCTACAGACACCCAGCACAGGCTCTCAGTTAAC
CGCCTATGTAGTGGTTCTGTGTACTAGTGTTATTTGCTAGGTGATAAAACTTCTTTTTTTAGAATTACAATGCAGATCGCTTAATACGCACGCACACTCATTCTTATAGACGTGTAAATA
AACTCTACTTTATGAACACCTCCTAAATACTATATACACCCTGCCGTCAAGTCCAAACACCTCCTAAATACTATATACACCCTGCCGTCAAGTCCAAAGAGAAGGATATAGCAAGTAGGT
AGGATCTTCCTGGCAATGGTAGTAAGTGTGGGACAAGGTTACAATGAGAGGCAATGGTAGATACAAGGTCACATTCATCCATTACTTGTTCCCTGTGATTGCACATGCATCAACAACACC
AAACAAGGAAATACTATAGGATCAATTAACTTCCTAGCAACGTTTAATAACATGCAGTTGGGAGGCCCAAGTTGGGGTGTGCTTCTGGGAAGGCTGGACAGCAAGACCTCCGACTACAAC
GGATCCCTGAACCACACAGCGCCCACCGACAACCTCACCATCTTCAGCTATGTTCAGCAACCTCAGCCTCAACGATGTCGACCTTGTCGCCCTTTCAGGTACCTACAAATCCATAAACTT
GATGCCCTCTCAGCTGGTATCGTCTATTCACTTGATTTTTGTTGTGAAAACGACAGGGGGGCACACGTTTGGCCGTGTACAATCACTACGAGATACTGGTACTTTGCTGAGTGTTTGTAG
CACTCGGCAAAGGTCCAAATACATTTAGCCTCGGCAAAAACCACACGGCAAAATTTTAGTCGGCAAAGAGATCTTTTATCGAGTGTTATTTTTCGTGCACTCGATAAAGCCTTTGCCGAG
TGTCCGACACTCGGTAAGGATAGAAACGAAAAAAATTCAAAAAAATCTGAAAAATAGGGAACAAAAAGAATATTTTTTCGCAGGAGGCCTGCGCCCACCTGACTCTATGTGCTGCTCAAG
TTTCAGAATTTTTGTGGCTTTGCGGCCAATGGAATTCAAACTCGTGACCTCTTTTGTCACGTGTCTCCCTCCTTAATCACTACACCACACTATCACTTATACACTATCACTTATGTCTAT
ATTACATTTCGGTTCCTCATATATTATATCAAATCACATATAAATTGATTATTTTGATATTCTAAACGATTGCAAATTAAAAAGTTGTCAACTATAAAGTTTTATAACTTTTCGGGACCT
ACAATTTTAATTTAGGGAGTTTCTCCATCCGAGGTCGTTTACAAAATTTGAATTTTAAATTTGAGAAATTCAAACGTAGTTTTTGTATCACAAGATGATTCCAAAACAAAAAGTTGTCAA
CTATAAAGTTTTATAACTTTTTGAGATCTACAAAGTTTATTTAGGGAGTTTTTCCATCTGAGGTCATTTGAAAAATTCGAATTTTAAAATTTTCAATTAAAGACGTAGTTTTGCATGACA
AGATGAACTCAAATAAAAAAGTTGGCACATACAAAAATTTCATAACTTATCAAGACCTATAAAGTTTATTTTGGTTGTTTTGTCATTTGCTCATCCGACATAGTGATTCTAATATTTTTC
ATAAATCTTATATATATCTCTTATAGTTTCATAAACTATATGAGAGATATGTAAAATTTATGAACAAATTTATTCGACTTTGTCAAATAAAAAAATAACCAAAATAAATATTGTAAATCT
TGAAAAGTTATAGAACTTTGTAGTTAATTTTTTTATTTGAATTCATTTAGGGCTTCAAAATTCAAATTAAAATTTTCTTTGCTGAGTGTTTTTTTGACACTCGGCAAAGAAGGTCTTTGC
CGAGTGTAAAAAAAGCACTCAACAAAGAAGTTTCTTGTCAAGTGTCAAAAAAACACTCGGTAAAGAAAGTCTATACCGAGTGTTTTTCTACATTCGGCAAAGAAACCTCTTTGCCGAGTA
TTTTTTTCCGATTGTTTTTCTTTGGCACTCGACAAAGAGCTTCTTTGCCGAGTGCTTGAAAGAAAACACTCGGCAAAGCGCTTAACACTTGGCAAAGACCTGGATTTCGATAGTGAATGC
CAATCCGTAGTGAACCGGCTCTACAACTTCAGCAACACAGGCCTGCTGGACCCAACCATGGACTTTGCTAACCTTGAGTTCCTGTCACAGAGGTGTCCAAGGAACGGCAACGGCTCGGCG
CTGAACGATGTCGATCCAACCACTCCAGACACCTTCCACACNAACCACTACTACACCAACATCGAAGTGAACCGGGGTTTCCTCAACTCCGATCAGGAGCTCAAGTCATCGCCCTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CCGCCCAACAACAAATCGGCGCGTGGGTTCCCGGCGGTGGACGCCGCCAAGGCCGCGTTAGAGGACGCCTGCCCTGCGGTTGTCTCCTGCGAGTCNGCCATCGCCGCTGAGATCTCCGTC
GAGCTGTTGGGAGGCCCAAGTTGGGGTGTGCTTCTGGGAAGGCTGGACAGCAAGACCTCCGACTACAACGGATCCCTGAACCACACAGCGCCCACCGACAACCTCACCATCTTCAGCTAT
GTTCAGCAACCTCAGCCTCAACGATGTCGACCTTGTCGCCCTTTCAGTGAATGCCAATCCGTAGTGAACCGGCTCTACAACTTCAGCAACACAGGCCTGCTGGACCCAACCATGGACTTT
GCTAACCTTGAGTTCCTGTCACAGAGGTGTCCAAGGAACGGCAACGGCTCGGCGCTGAACGATGTCGATCCAACCACTCCAGACACCTTCCACACNAACCACTACTACACCAACATCGAA
GTGAACCGGGGTTTCCTCAACTCCGATCAGGAGCTCAAGTCATCGCCCTAG |
Retrieve as FASTA
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