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Entry information : SbGPx07 (Sb01g035940 [2.1] / Sobic.001G378700.1 [1.4])
Entry ID 7937
Creation 2011-01-21 (Toky Ramarohetra)
Last sequence changes 2011-03-02 (Catherine Mathe)
Sequence status complete
Reviewer Messaoudi
Last annotation changes 2014-08-06 (Messaoudi)
Peroxidase information: SbGPx07 (Sb01g035940 [2.1] / Sobic.001G378700.1 [1.4])
Name (synonym) SbGPx07 (Sb01g035940 [2.1] / Sobic.001G378700.1 [1.4])
Class Plant glutathione peroxidase    [Orthogroup: Gpx2007]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum bicolor    [TaxId: 4558 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SbGPx07
start..stop		 S start..stop
ZmGPx03-2 301 5.46e-107 1..163 1..163
ZmGPx01-3 292 2.64e-103 1..163 1..164
ZmGPx01 289 4.19e-102 2..164 5..167
SpGPx01 288 9.12e-102 1..164 1..167
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 59588841..59588879 37 N° 2 59588634..59588710 75 N° 3 59586604..59586665 60 N° 4 59586346..59586464 117
N° 5 59586036..59586203 166 N° 6 59585905..59585937 31  
complement(join(59585905..59585937,59586036..59586203,59586346..59586464,5958660 4..59586665,59588634..59588710,59588841..59588879))


exon

Literature and cross-references SbGPx07 (Sb01g035940 [2.1] / Sobic.001G378700.1 [1.4])
DNA ref. Phytozome 12:   chromosome_1 (59588879..59585905)
Protein sequence: SbGPx07 (Sb01g035940 [2.1] / Sobic.001G378700.1 [1.4])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   165
PWM (Da):   %s   18291.4 Transmb domain:   %s   i13-30o
PI (pH):   %s   8.44
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAASSLHDFIVKDASGKDVHLSTYKGKVLLIVNVASKCGLTNSNYTELTQLYEMYKDGFEILAFPCNQFGGQEPATSEEIVQFVCTRFTAKFPIFDVDVNGEDAAPIYKFLKSSKTGPF
GENIKWNFAKFLVDKKGHVIERYAPTTYPLSIQKDIKKLLGSY*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 6 introns). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGCCGCCAGCTCCCTCCACGACTTCATCGTCAAGGTTCTGGCTGCTATTATCCTCCTCAGTTCCCTTTTGTTTGAAAACTAATGCACGCCAGGGTACCGTGTCCTACACTCCTAC
TCCTACTGTGTGTGAATCGTGTGCATTATCGTATATATTGCGTGTGTAGGAGATGCAAGCGGCAAAGATGTGCACCTGAGCACCTACAAGGGCAAGGTTCTCCTCATCGTCAACGTTGCA
TCAAAGTGGTATGGTGCATGACAATCATATTATTGTTCCCTCTGTCAGCATATATAATATTGGAGCGATTGAAATGTAGGACGCTATTCCCGCTTTACGTTTAGCAGAATTTAAGCTAGA
AAACAGATGATCATATTCTTTTGCCTTTTCTAATTCATTCAAATATGGGAAGTTGAGCTTCGTATACATTAATAGTAAATACCAAAGATGCTTGACAGCGGGCTGAAATGTAGGACGGGG
CCTTTCTCAGATATATATATATTTTTTGAAACCGTCTCTTCGCAGAATTTTTTTTTTTGATTCAAGGTGCTCTTTATTACTCATTAGTGTCAGCCAAATCGCTGATCACTAAACCCTCAA
TCTCCTGAGGGACACCCTCCCAAGTGACACACTGTCTACTAGGGAACTTACACCCGAGAGCAGCCAAAGCATGGGCTACACTATTACAGACTCAATTACAAACATTAATACTACTAGACC
TGAGGTCTGTAGCTAACAGGAATTTCATATCTGTTAAAATCCCACCGATCGCAGACAAACGGTAGTCGTCGGACTCCAATGCATCTTTGACAAGAGAAGCATCTGTCTCAATGCACAAGT
TCGCAATCCCCAATCGAGATGCTTCCTGCATTCCAGCTGCACAACCTAGGATTTCTGCATGGAAAGCATTTAACAGGAAACCTTCAGAACCCGCGCCTGCTTTAAGCACTTGGCCTTGAT
CATCTCTTATCACATAGCCCCATCCGCCATTCTTGCTCTCTTTATGAAAGGCTCCATCAGACTATAAGAGTTCAGTTTGAAACATCCATCAGAGGGCTTCTTCCATCTGGGTATCTGACA
GTTGTCCGACAACAGCCCACCTTCTGGTTTTTTCATATAGTTTTCAGCATGCGCTGCCGCCATATAAGCGACCTCTGCAGGTGTACGGTTTCTTCCATTTTCCCTTCTCTTATTTCTCTC
ATCCCACCACATCCACAACAGCAAAATCACTGTAAGTTGCTCTTCTTCTTGTAGTCTCAGGATTGTTTCCATCACCCCTCTGGCTGATCCGGCTTCAAGTAGTGCACATCTGATCCTTTC
TAGGTTCAGTTCACGCCATGCAGTTTTAGCTTCTTTGCATTTAAAAAACAGATGCGCCCCATCCTCGTCGAGCCTGTTGCACATACTGCACAAAGTATCAGTCTTCACCCCCCTTCGTTT
CAACATCCTTTTGACAGCTAGAGTATTGTGACTCATCCTCCATAAGAAATGTTTCACTTTCGGTGGGCATTCCAGTTTCCATATTTTATTCCAGAAGTCTGCTCCTCCGGTGCTACTACC
AGTACCAGCCCTGTTCAGACATTTTTGTTCTCTGAACTCGCAGTTTCTCTGAACTTTATACGCTGACTTAACGGAGAATTGTCCTTTCGCATCAAAATGCCATCCAACAACATCATCCAT
CTCCTGGTGTACTGGTATGGATCCATTCATTTGGACATCCTCCTCTGTAAAGATTTGCTGCAGCAGAGAAATGTCCCAATGTTCTGTAATCGGGTCTATAAGCTCATCCACCTTTTTCAG
CTCGTTCAAGTATAGGAAGTTGAGCTTCGTATACACTCGCCTCACATAGTCACATATTCATGTGCTAAACACCAAAAGATGCTACATGCTGTAGGGAATATACGCACTGAACGAGATATT
AGTATGATATATATAAGCAGACAAATTGTTCAGAATTGGACAGATAAATAAACGTTTGTACATATTTTTGAAGTACCATACACTGTTTTTTTCTATTTTGGCCTGAGAACGGGCTGACAA
TTTTGGCCTATACAAATATTAAGGCCTGAAAAAAATAGAATCAGATTATGAAATGGCCCGTGGGATATGATGTGGCCCATTGCCATCCTCAGATGCAGATGTAGCAAGTCCTATGAATGT
TTATTAGCTTTGGTTTTTTGAATTAAAAGATCACTTGTCTGTAATGATTATTACAGTGTGGCCTGACCAATTCTAACTACACGGAGCTTACCCAGCTATACGAGATGTACAAGGACCAGG
GTGAGTCGCATTTATTTGAGATACTGAATTTCTCTCTCTGTTTTTTTGATGCCCAGTTCCTCATGTCGTAGATTGGTTCAGTTATGATTCATAGTATGCTATAAATTAATATTGCTGTAA
TTGGTGTGACCTTCTTCAGGTGTTTTGAGATCCTTGCGTTCCCATGCAACCAGTTCGGTGGGCAAGAGCCTGCCACGAGTGAGGAGATCGTCCAGTTTGTTTGCACTCGCTTCACGGCCA
AGTTTCCAATTTTTGACAAGGTAATAAATTTGTGCGCACAAAACTTCTTCAATTTCTACTCTTTTGCATGTCCAACCTGAAATGAACAGCGACTGATCATCATGTAGGAGTAATTCTAAG
GTTACAAAGTTTTAACACTTTTCCTTTATTTTTCCCCGTAAGGTGTTGACGTCAACGGCGAAGATGCTGCACCCATCTACAAGTTTCTGAAATCCAGCAAAACCGGTCCCTTCGGTGAGA
ACATCAAGTGGAACTTCGCCAAGTTCTTGGTTGACAAAAAGGGGCATGTCATTGAGCGGTATGCTCCAACCACTTACCCACTCAGCATCCAGGTGAGAGTTCGGACTGGTGCATCTTGTG
CTATACATACTCGTCGAACTTCCTCGATCGTCTGATCTTACAAGACTACCTTTATTTTGCATATCTGCAGAAAAGGACATCAAGAAGCTGCTTGGGAGTTATTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGCCGCCAGCTCCCTCCACGACTTCATCGTCAAGGATGCAAGCGGCAAAGATGTGCACCTGAGCACCTACAAGGGCAAGGTTCTCCTCATCGTCAACGTTGCATCAAAGTGTGGC
CTGACCAATTCTAACTACACGGAGCTTACCCAGCTATACGAGATGTACAAGGACCAGGGTTTTGAGATCCTTGCGTTCCCATGCAACCAGTTCGGTGGGCAAGAGCCTGCCACGAGTGAG
GAGATCGTCCAGTTTGTTTGCACTCGCTTCACGGCCAAGTTTCCAATTTTTGACAAGGTTGACGTCAACGGCGAAGATGCTGCACCCATCTACAAGTTTCTGAAATCCAGCAAAACCGGT
CCCTTCGGTGAGAACATCAAGTGGAACTTCGCCAAGTTCTTGGTTGACAAAAAGGGGCATGTCATTGAGCGGTATGCTCCAACCACTTACCCACTCAGCATCCAGAAGGACATCAAGAAG
CTGCTTGGGAGTTATTGA

Retrieve as FASTA