Entry information : PpaPrx52
Entry ID 7943
Creation 2011-01-27 (Toky Ramarohetra)
Last sequence changes 2012-08-22 (Catherine Mathe)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-24 (Christophe Dunand)
Peroxidase information: PpaPrx52
Name PpaPrx52
Class Class III peroxidase    [Orthogroup: Prx063]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaPrx52
start..stop
S start..stop
PpaPrx06 660 0 1..316 1..316
PpaPrx[P]06 422 2.4e-150 1..280 1..279
PpaPrx36 396 1.56e-139 25..316 26..317
PpaPrx02 340 1.66e-117 6..316 5..317
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7943' 'join(950219..950437,950724..951455)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 950219..950437 217 N° 2 950724..951455 730  
join(950219..950437,950724..951455)


exon

Literature and cross-references PpaPrx52
DNA ref. Phytozome 12:   scaffold_114 (950219..951455)
Protein sequence: PpaPrx52
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   316 (290)
PWM (Da):   %s   34660.81 (32032.4) Transmb domain:   %s   i7-24o
PI (pH):   %s   8.4 (8.40) Peptide Signal:   %s   cut: 27 range:27-316
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAHHAMRATVIAVVLVAMLAVTGVDATLRYGFYKHSCPNVESIIY
KAMKAAYEKDNTVAPGVLRLIFHDCFVR
GCDASVLLAGNNTERAALNNQGLHGFEAIDAVKDAVEKECPGVVSCADILAFASRDTVILTKGVGWEVPAGRMDGRISLSTEPLQELPPSTFTSQQLISIFAGKGLTAKQMVDLSGSHTL
GITHCLHLRDRIFTTIDPTIPKNLLRQLQRKCPSNTSLTPLQIDRYTGNKFDTQYFRNIVRGRGLMTSDQDLFRDPATKPFVEANLKRATFDKNFAEAMVAMTSIEVKIGHEGEIRKHCQ
FVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (intron 1). Tandem duplication of PpaPrx06 or misassembly!!)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGCATCACGCGATGAGGGCCACTGTAATAGCCGTCGTGTTGGTCGCCATGTTGGCCGTGACTGGTGTTGATGCTACGCTGAGGTATGGCTTCTACAAGCACTCGTGCCCTAATGTG
GAGAGCATCATTTACAAGGCGATGAAGGCGGCATATGAGAAAGACAATACAGTTGCTCCTGGCGTTCTCCGCCTCATCTTTCATGACTGCTTCGTTCGG
GGGTACGCATGCAGCTGAATA
TTCAAGNNNNNNNNNNNNNNNNNNNNNNGATATTTGTTTCTTTAGGGTCAATATGCCGCATTAGAGTGGAATTGGTTTAAGGCGGTTCTTTTCTTCGCACCGTGAAGCTCATCACACTGG
GGTCGCTGATTCAGAGATATACACATTACAATGCCTGACTCCAAATGTGCACTTTTGACGTGAATCTATTTTCGCGAGCGAGATTGAGGCGAGATCCCGATCATAGAGATCGATACATTG
CATTGATGGATCTCATAATGGCTGCAGGGCTGTGATGCCTCCGTCCTTCTGGCTGGAAATAACACAGAGAGAGCTGCCCTGAATAACCAAGGCTTGCACGGGTTCGAGGCCATCGATGCT
GTTAAGGACGCAGTCGAGAAAGAATGCCCCGGAGTGGTCTCATGCGCAGACATCCTCGCCTTCGCTTCTCGTGACACAGTGATCCTGACTAAAGGAGTGGGCTGGGAAGTCCCCGCAGGA
CGGATGGACGGCAGAATTTCTCTCTCCACAGAGCCTCTTCAGGAGCTGCCTCCATCAACATTCACTAGCCAGCAGCTAATATCCATATTTGCTGGCAAGGGACTGACCGCAAAACAGATG
GTTGATCTCTCCGGTTCTCACACCCTCGGAATCACCCACTGCCTTCATCTGCGCGACAGGATTTTCACCACCATAGACCCAACTATCCCGAAGAACCTACTCAGGCAGCTGCAGCGCAAG
TGTCCCAGTAACACCTCCCTCACTCCCTTGCAGATCGACCGCTACACCGGAAATAAGTTCGACACCCAGTACTTCAGAAACATCGTCAGGGGACGCGGCCTCATGACCTCAGACCAGGAT
CTGTTCAGAGACCCAGCGACGAAACCTTTTGTGGAGGCTAACCTTAAAAGAGCCACATTCGACAAGAACTTCGCTGAGGCGATGGTGGCGATGACTAGCATCGAGGTAAAGATTGGACAC
GAGGGGGAGATCAGAAAGCACTGCCAGTTCGTGAACTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGCATCACGCGATGAGGGCCACTGTAATAGCCGTCGTGTTGGTCGCCATGTTGGCCGTGACTGGTGTTGATGCTACGCTGAGGTATGGCTTCTACAAGCACTCGTGCCCTAATGTG
GAGAGCATCATTTACAAGGCGATGAAGGCGGCATATGAGAAAGACAATACAGTTGCTCCTGGCGTTCTCCGCCTCATCTTTCATGACTGCTTCGTTCGG
GGCTGTGATGCCTCCGTCCTT
CTGGCTGGAAATAACACAGAGAGAGCTGCCCTGAATAACCAAGGCTTGCACGGGTTCGAGGCCATCGATGCTGTTAAGGACGCAGTCGAGAAAGAATGCCCCGGAGTGGTCTCATGCGCA
GACATCCTCGCCTTCGCTTCTCGTGACACAGTGATCCTGACTAAAGGAGTGGGCTGGGAAGTCCCCGCAGGACGGATGGACGGCAGAATTTCTCTCTCCACAGAGCCTCTTCAGGAGCTG
CCTCCATCAACATTCACTAGCCAGCAGCTAATATCCATATTTGCTGGCAAGGGACTGACCGCAAAACAGATGGTTGATCTCTCCGGTTCTCACACCCTCGGAATCACCCACTGCCTTCAT
CTGCGCGACAGGATTTTCACCACCATAGACCCAACTATCCCGAAGAACCTACTCAGGCAGCTGCAGCGCAAGTGTCCCAGTAACACCTCCCTCACTCCCTTGCAGATCGACCGCTACACC
GGAAATAAGTTCGACACCCAGTACTTCAGAAACATCGTCAGGGGACGCGGCCTCATGACCTCAGACCAGGATCTGTTCAGAGACCCAGCGACGAAACCTTTTGTGGAGGCTAACCTTAAA
AGAGCCACATTCGACAAGAACTTCGCTGAGGCGATGGTGGCGATGACTAGCATCGAGGTAAAGATTGGACACGAGGGGGAGATCAGAAAGCACTGCCAGTTCGTGAACTAG

Retrieve as FASTA