Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
313 (293) |
| PWM (Da): |
33547.28 (31313.1) |
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| PI (pH):
| 7.68 (7.37) |
Peptide Signal:
| cut: 21 range:21-313 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MRAITASFFI FCFLVPSVFG KLRRGFYDSS CPLAESTVSR VVAKHHSLNQ TVTAALLRMQ FHDCFVNGCD ASLLIDSTPE RPSEKSAEAN VSVRGFEIID EVKKELEIVC PKTVSCADIV
TLATKDSIAL AGGPRFTVQT GxGNFRDxLx SSPRAVILPG PLISVAVSIK DFEGKGLNVT NMVALIGGGH SVGVAHCSLF QDRLKDPKMD SKLKAKLQNT CRGPNDPSVV LDQMTPLEVD
NQIYKQIKSQ RGILRIDQNL GLDDSTSRIV SNFALNETLF GERFAEAMQI MGEIKVLTGN SGEIRTNCIV VSH
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Retrieve as FASTA
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| Remarks |
Pseudogene from genomic (chromo 1). No EST. Frame shift and stop codon in frame. join(12528095..12528295,12528399..12529134) |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGGGCAA TCACAGCTTC GTTTTTCATT TTCTGCTTCC TTGTTCCCTC TGTTTTCGGG AAGCTCCGAC GTGGGTTTTA TGACAGTTCA TGCCCTCTCG CTGAATCTAC CGTGTCTAGA
GTTGTTGCCA AACATCACTC CCTTAACCAA ACCGTTACTG CAGCGTTGCT TCGTATGCAG TTTCATGATT GCTTTGTCAA CGTTCGTAAG CTTCTCCTTT GTGTGTTTGT ATATGTATGC
ATGATGTATC ATAAACTAGC TAATTATATT AACCAAGCAA ATATTTTGAA TGCTGCATGT GTAGGGTTGT GATGCTTCCC TCTTGATCGA CTCAACGCCC GAAAGGCCAT CTGAGAAAAG
CGCGGAGGCA AACGTAAGCG TGAGAGGCTT CGAGATCATC GATGAGGTTA AGAAAGAGCT TGAGATAGTT TGCCCAAAAA CAGTCTCATG CGCAGACATT GTAACTCTAG CCACAAAAGA
CTCGATTGCA TTAGCGGGTG GTCCACGTTT CACAGTACAA ACAGGATAnG GTAATTTCCG TGATnnnTTA TAnTCAAGTC CTAGGGCTGT GATTTTGCCC GGACCACTAA TTTCCGTGGC
TGTATCAATC AAAGATTTTG AAGGTAAAGG TTTGAATGTC ACCAACATGG TTGCACTTAT TGGTGGTGGT CACAGCGTCG GTGTTGCACA TTGCAGTCTT TTTCAGGATA GGCTTAAGGA
TCCTAAAATG GACAGCAAAC TGAAAGCTAA GTTACAGAAC ACATGTCGTG GTCCAAATGA CCCATCAGTG GTCTTGGACC AAATGACGCC ACTTGAGGTA GACAATCAAA TCTATAAACA
GATAAAAAGT CAAAGAGGAA TCCTTAGAAT TGATCAAAAC TTGGGTCTCG ATGACTCAAC CAGTAGGATC GTATCAAATT TTGCATTAAA TGAAACATTA TTCGGAGAAA GATTTGCTGA
AGCAATGCAG ATAATGGGTG AAATAAAAGT TCTTACGGGA AATTCTGGAG AGATCAGGAC AAACTGCATA GTCGTCAGCC ACTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGGGCAA TCACAGCTTC GTTTTTCATT TTCTGCTTCC TTGTTCCCTC TGTTTTCGGG AAGCTCCGAC GTGGGTTTTA TGACAGTTCA TGCCCTCTCG CTGAATCTAC CGTGTCTAGA
GTTGTTGCCA AACATCACTC CCTTAACCAA ACCGTTACTG CAGCGTTGCT TCGTATGCAG TTTCATGATT GCTTTGTCAA CGGTTGTGAT GCTTCCCTCT TGATCGACTC AACGCCCGAA
AGGCCATCTG AGAAAAGCGC GGAGGCAAAC GTAAGCGTGA GAGGCTTCGA GATCATCGAT GAGGTTAAGA AAGAGCTTGA GATAGTTTGC CCAAAAACAG TCTCATGCGC AGACATTGTA
ACTCTAGCCA CAAAAGACTC GATTGCATTA GCGGGTGGTC CACGTTTCAC AGTACAAACA GGATAnGGTA ATTTCCGTGA TnnnTTATAn TCAAGTCCTA GGGCTGTGAT TTTGCCCGGA
CCACTAATTT CCGTGGCTGT ATCAATCAAA GATTTTGAAG GTAAAGGTTT GAATGTCACC AACATGGTTG CACTTATTGG TGGTGGTCAC AGCGTCGGTG TTGCACATTG CAGTCTTTTT
CAGGATAGGC TTAAGGATCC TAAAATGGAC AGCAAACTGA AAGCTAAGTT ACAGAACACA TGTCGTGGTC CAAATGACCC ATCAGTGGTC TTGGACCAAA TGACGCCACT TGAGGTAGAC
AATCAAATCT ATAAACAGAT AAAAAGTCAA AGAGGAATCC TTAGAATTGA TCAAAACTTG GGTCTCGATG ACTCAACCAG TAGGATCGTA TCAAATTTTG CATTAAATGA AACATTATTC
GGAGAAAGAT TTGCTGAAGC AATGCAGATA ATGGGTGAAA TAAAAGTTCT TACGGGAAAT TCTGGAGAGA TCAGGACAAA CTGCATAGTC GTCAGCCACT GA
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Retrieve as FASTA
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