Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
354 (329) |
| PWM (Da): |
36786.48 (34333.2) |
|
| PI (pH):
| 6.36 (5.79) |
Peptide Signal:
| cut: 26 range:26-354 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MAAGFKLAIL AVACALLLAT PACHCRPSEL RVGYYEDTCP EAESLVRSAV TDAVTGNDDG IGIGAGLIRL LFHDCFVQGC DASVLLDPTT SNPAPEKLGA PNAHSLRGFE AIDTAKAALE
LACPGVVSCA DVLAFAARDA SYILSVGNYN EPIEFAMPGG RLDGRRSMAE DTLHGSLPSA SANVTELVDA FQTKGLGVED LVVLSGAHSV GQARCSFFSD AGGGVGIDPA FARSVRRRCS
TPEQAPAPSP AAAAAGENDE ERMMSLDAVT PGALDGQYYR NVVRRRVVLG SDAALMASPE TARIVRASVG RNGRWEKKFG EAMVRMAAIG VKTKLGAAGR RGRGEVRTNC RVVN
|
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from genomic. Prediction from ensembl. No prediction from Phytozome. No EST. |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTGCAG GCTTCAAGCT CGCGATTCTG GCCGTCGCAT GCGCCCTGCT GTTAGCTACT CCCGCATGTC ATTGCCGCCC CTCCGAGCTC CGTGTCGGGT ACTACGAGGA CACGTGCCCG
GAGGCGGAGT CCCTCGTGCG GTCCGCCGTG ACCGACGCCG TCACCGGGAA CGACGACGGC ATCGGCATCG GCGCGGGGCT CATCCGGCTC CTCTTCCACG ACTGCTTCGT GCAAGGCTGC
GACGCCTCCG TGCTCCTCGA CCCGACGACA TCCAACCCGG CTCCGGAGAA GCTCGGCGCC CCGAACGCCC ACAGCCTCCG CGGCTTCGAG GCCATCGACA CCGCCAAAGC CGCCCTCGAG
CTCGCCTGCC CCGGCGTCGT CTCCTGCGCC GACGTTCTCG CCTTCGCCGC CCGCGACGCC TCCTACATCC TGAGCGTCGG GAACTACAAC GAGCCCATCG AGTTCGCGAT GCCGGGAGGA
AGGCTCGACG GCCGCCGGTC CATGGCCGAA GACACGCTGC ACGGATCCCT GCCGTCGGCG TCCGCTAACG TCACGGAACT CGTGGACGCG TTCCAGACAA AGGGGCTCGG CGTTGAGGAC
TTGGTGGTCC TCTCCGGCGC GCACTCGGTG GGCCAGGCCC GATGCTCCTT CTTCTCCGAC GCCGGCGGCG GCGTTGGCAT CGACCCGGCG TTCGCGAGGT CGGTGCGGCG GCGGTGCAGC
ACCCCGGAGC AAGCCCCGGC CCCGTCACCG GCGGCGGCGG CGGCGGGCGA GAACGACGAG GAGAGGATGA TGAGCCTGGA CGCGGTGACC CCGGGGGCGC TGGACGGGCA GTACTACCGG
AACGTGGTGA GGCGGAGGGT GGTGCTGGGC TCCGACGCGG CGCTGATGGC GTCACCGGAG ACGGCGCGGA TTGTGCGCGC GAGCGTCGGG AGGAATGGGA GGTGGGAGAA GAAGTTCGGG
GAGGCCATGG TGAGGATGGC GGCCATCGGC GTCAAGACTA AGCTGGGCGC CGCCGGGCGC CGTGGGCGCG GCGAGGTCAG GACTAACTGC AGGGTCGTCA ACTAG
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Retrieve as FASTA
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|
CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTGCAG GCTTCAAGCT CGCGATTCTG GCCGTCGCAT GCGCCCTGCT GTTAGCTACT CCCGCATGTC ATTGCCGCCC CTCCGAGCTC CGTGTCGGGT ACTACGAGGA CACGTGCCCG
GAGGCGGAGT CCCTCGTGCG GTCCGCCGTG ACCGACGCCG TCACCGGGAA CGACGACGGC ATCGGCATCG GCGCGGGGCT CATCCGGCTC CTCTTCCACG ACTGCTTCGT GCAAGGCTGC
GACGCCTCCG TGCTCCTCGA CCCGACGACA TCCAACCCGG CTCCGGAGAA GCTCGGCGCC CCGAACGCCC ACAGCCTCCG CGGCTTCGAG GCCATCGACA CCGCCAAAGC CGCCCTCGAG
CTCGCCTGCC CCGGCGTCGT CTCCTGCGCC GACGTTCTCG CCTTCGCCGC CCGCGACGCC TCCTACATCC TGAGCGTCGG GAACTACAAC GAGCCCATCG AGTTCGCGAT GCCGGGAGGA
AGGCTCGACG GCCGCCGGTC CATGGCCGAA GACACGCTGC ACGGATCCCT GCCGTCGGCG TCCGCTAACG TCACGGAACT CGTGGACGCG TTCCAGACAA AGGGGCTCGG CGTTGAGGAC
TTGGTGGTCC TCTCCGGCGC GCACTCGGTG GGCCAGGCCC GATGCTCCTT CTTCTCCGAC GCCGGCGGCG GCGTTGGCAT CGACCCGGCG TTCGCGAGGT CGGTGCGGCG GCGGTGCAGC
ACCCCGGAGC AAGCCCCGGC CCCGTCACCG GCGGCGGCGG CGGCGGGCGA GAACGACGAG GAGAGGATGA TGAGCCTGGA CGCGGTGACC CCGGGGGCGC TGGACGGGCA GTACTACCGG
AACGTGGTGA GGCGGAGGGT GGTGCTGGGC TCCGACGCGG CGCTGATGGC GTCACCGGAG ACGGCGCGGA TTGTGCGCGC GAGCGTCGGG AGGAATGGGA GGTGGGAGAA GAAGTTCGGG
GAGGCCATGG TGAGGATGGC GGCCATCGGC GTCAAGACTA AGCTGGGCGC CGCCGGGCGC CGTGGGCGCG GCGAGGTCAG GACTAACTGC AGGGTCGTCA ACTAG
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Retrieve as FASTA
|
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