1. Browse the Database
  2. View Redoxidase
Entry information : LePrx76 (TAP1 / TMP1 / Solyc02g079500.2.1[2.3])
Entry ID 8
Creation 2006-12-27 (Christophe Dunand)
Last sequence changes 2012-05-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-26 (Christophe Dunand)
Peroxidase information: LePrx76 (TAP1 / TMP1 / Solyc02g079500.2.1[2.3])
Name (synonym) LePrx76 (TAP1 / TMP1 / Solyc02g079500.2.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx189]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx76
start..stop		 S start..stop
StPrx72 712 0 1..364 1..363
LePrx75 634 0 1..364 1..363
StPrx52 622 0 1..364 1..358
NtPrx27-1B 550 0 1..364 1..358
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 428..772 343 N° 2 1635..1832 196 N° 3 2115..2666 550  
join(428..772,1635..1832,2115..2666)


exon

Literature and cross-references LePrx76 (TAP1 / TMP1 / Solyc02g079500.2.1[2.3])
Literature Roberts E., Kolattukudy P.E.; Molecular cloning, nucleotide sequence, and abscisic acid induction of a suberization-associated highly anionic peroxidase. Mol. Gen. Genet. 217:223-232(1989).
Protein ref. UniProtKB:   P15003
DNA ref. GenBank:   X15853.1
Protein sequence: LePrx76 (TAP1 / TMP1 / Solyc02g079500.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   364 (344)
PWM (Da):   %s   38594.05 (36495.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.73 (4.56) Peptide Signal:   %s   cut: 21 range:21-364
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGFRLSHLSLALSFVALALAGVAIYRNTYEAIIMKNGSLLKNVSP
DFDSLESGVASILTLNNNKKRNSDKYLRQQLTPEACVFSAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVAL
AGAHTVGFARCSTVCTSGNVNPAAQLQCNCSATLTDSDLQQLDTTPTMFDKVYYDNLNSNQGIMFSDQVLTGDATTAGFVTDYSNDVNVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSR
VNPTSVASM*

Retrieve as FASTA  
Remarks Complete sequence from 16 ESTs and genomic (chromo 2, introns 1 and 2). Strain="Castlemart II".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTTTTCGTTTGAGTCATTTGAGTCTTGCATTGAGTTTTGTGGCACTTGCACTTGCAGGTGTTGCTATTTATAGAAATACTTATGAAGCCATCATCATGAAAAACGGTTCACTCCTC
AAAAATGTTTCTCCAGATTTCGATTCGTTGGAATCAGGCGTAGCCAGTATTTTAACCTTAAATAATAATAAGAAGAGAAATTCAGACAAGTACTTGAGACAGCAACTAACTCCGGAGGCA
TGCGTTTTCTCAGCTGTACGAGCAGTTGTGGACAGTGCTATTGATGCAGAAACTCGCATGGGAGCTTCTCTCATTCGTCTCCACTTTCATGACTGCTTCGTTGATATGTAAATATATATT
TCCTTCGCTCTTTTTTTATCGTATTTGATTATGCACAAAATTTTATTTGAAGTCACTTAAATATTTTATGCTTGTTCAAACAAATTTGAAAATTCTTTCAGTTTTTCCTGAACTCACAAT
GCATGCAGTCAATTACTTTACTAGGGAAAATGCACAAGTACATTCTCAACCTATGTCCGAAATTACAGAGACACACTTATATTATACTAAGGTTCTATTACTCCCCTGAACTTATTTTAT
AAGTAATATTCTACCTAGCTTGAAAAAAAAGTCAACCTGCGTAAGGCCAACAAGATAGTGTCACGTAGGCCGAAAAAAAGTAAAAAATTATTAATAAAATAAGTTAAGTAAAATAATAGG
ACCTTAGTATAGTATAAGCGTGTCTCTAAAATTTCGGGTATAGGTTAAAGGGACTACTTAAATTGAAATGAAAAGAGTAGAGGGATATCATTTTTTAAGACAGGCTAAAAAGAGTACAAT
GTTAGGTGTAGCATATTAATTGAATCCGAGTCCTTTTCCTCTTATTAATTAAACCTGGCCGTATGATCATATTTTTCTTTCATAAATAAATAAATTGTTGAAAGATCTGAGGCTACGAAC
TCCAAATTAAAATTATAATGCCATACTTGTTGTTTTAAATCGCAAATATTTAAAAAAAAAATACTTTTTCTTTTGAACTCCCCGTCAAGTAAAATATCTTCGCACACATTTTGCTTCTAC
ATGAACTCCAAAAACTTTGAAAAGTCTAGTCTGCTTTCCAGTTTTATTTTATTTTAGATCTTCTGCAGTTGATTTATGTATTTGACTAATTATACCTCTCTCGTTTTCTTTTTTATTACG
AAAAATAAGGGTTGTGATGGAGGTATTCTGCTAGATGATATTAATGGAACATTTACAGGGGAACAAAACTCACCACCCAACGCCAACTCAGCCAGAGGTTATGAAGTAATAGCACAAGCT
AAACAAAGTGTCATAAACACATGCCCCAACGTATCTGTATCTTGTGCCGACATATTAGCTATTGCTGCTCGTGATTCTGTTGCTAAAAAGTAAGTCTATCATTCATTTTACAGTTTGATA
ATTTCTACCAAAATTAATTACGAATAGTAACAAATGGATATTTAATCAAACTCTAAAGTCATCGTGGAAGTTGAGAAATGTTCAAAGAGATGACCAAATTCCACATCCACAATCAATGTG
GAAATTGTGACACCTCGCCTGTGGGCGTCTAACATTTAATAGATGAAGCATTGTATTTATTTAGGTTATGATGATATGACAAAGAAATTGACTTGGGCTAACTCAAACTCTGTTTTATTG
GTATTTGACAGTTAGGAGGACAAACTTATAGCGTTGCATTAGGGAGAAGCGATGCTAGAACTGCCAACTTTAGTGGTGCTATAAATCAACTTCCAGCTCCATTCGACAACCTAACAGTCC
AAATACAGAAATTCAGCGACAAAAATTTCACCCTCCGTGAAATGGTTGCACTAGCTGGTGCACACACGGTAGGTTTCGCCAGGTGTTCCACAGTTTGCACCAGCGGTAACGTTAATCCTG
CCGCACAACTCCAATGCAACTGCTCCGCCACGCTAACTGATTCTGATTTGCAACAATTGGATACTACTCCTACTATGTTCGACAAAGTTTACTACGATAACTTAAACAGCAACCAAGGCA
TAATGTTTTCAGATCAAGTTTTGACCGGGGATGCTACAACTGCTGGTTTTGTAACGGATTATAGCAACGATGTGAACGTTTTCCTTGGAGATTTTGCTGCTGCCATGATCAAGATGGGAG
ACTTGCCCCCCTCCGCCGGCGCTCAATTGGAAATTCGTGATGTTTGTAGCAGGGTTAATCCCACTTCAGTGGCTTCTATGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTTTTCGTTTGAGTCATTTGAGTCTTGCATTGAGTTTTGTGGCACTTGCACTTGCAGGTGTTGCTATTTATAGAAATACTTATGAAGCCATCATCATGAAAAACGGTTCACTCCTC
AAAAATGTTTCTCCAGATTTCGATTCGTTGGAATCAGGCGTAGCCAGTATTTTAACCTTAAATAATAATAAGAAGAGAAATTCAGACAAGTACTTGAGACAGCAACTAACTCCGGAGGCA
TGCGTTTTCTCAGCTGTACGAGCAGTTGTGGACAGTGCTATTGATGCAGAAACTCGCATGGGAGCTTCTCTCATTCGTCTCCACTTTCATGACTGCTTCGTTGATGGTTGTGATGGAGGT
ATTCTGCTAGATGATATTAATGGAACATTTACAGGGGAACAAAACTCACCACCCAACGCCAACTCAGCCAGAGGTTATGAAGTAATAGCACAAGCTAAACAAAGTGTCATAAACACATGC
CCCAACGTATCTGTATCTTGTGCCGACATATTAGCTATTGCTGCTCGTGATTCTGTTGCTAAATTAGGAGGACAAACTTATAGCGTTGCATTAGGGAGAAGCGATGCTAGAACTGCCAAC
TTTAGTGGTGCTATAAATCAACTTCCAGCTCCATTCGACAACCTAACAGTCCAAATACAGAAATTCAGCGACAAAAATTTCACCCTCCGTGAAATGGTTGCACTAGCTGGTGCACACACG
GTAGGTTTCGCCAGGTGTTCCACAGTTTGCACCAGCGGTAACGTTAATCCTGCCGCACAACTCCAATGCAACTGCTCCGCCACGCTAACTGATTCTGATTTGCAACAATTGGATACTACT
CCTACTATGTTCGACAAAGTTTACTACGATAACTTAAACAGCAACCAAGGCATAATGTTTTCAGATCAAGTTTTGACCGGGGATGCTACAACTGCTGGTTTTGTAACGGATTATAGCAAC
GATGTGAACGTTTTCCTTGGAGATTTTGCTGCTGCCATGATCAAGATGGGAGACTTGCCCCCCTCCGCCGGCGCTCAATTGGAAATTCGTGATGTTTGTAGCAGGGTTAATCCCACTTCA
GTGGCTTCTATGTGA

Retrieve as FASTA