Entry information : ZmAPx[P]02 (GRMZM2G093346 [6a])
Entry ID 8001
Creation 2011-02-18 (Christophe Dunand)
Last sequence changes 2011-02-18 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2015-07-07 (Christophe Dunand)
Peroxidase information: ZmAPx[P]02 (GRMZM2G093346 [6a])
Name (synonym) ZmAPx[P]02 (GRMZM2G093346 [6a])
Class Ascorbate peroxidase     [Orthogroup: APx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmAPx[P]02
start..stop
S start..stop
ZmAPx[P]07 264 2e-93 2..131 1..130
ZmAPx05 268 3e-93 1..131 120..250
ZmAPx01 267 7e-93 1..131 120..250
ZmAPx[P]01 259 1e-91 1..127 1..127
Literature and cross-references ZmAPx[P]02 (GRMZM2G093346 [6a])
Protein sequence: ZmAPx[P]02 (GRMZM2G093346 [6a])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   131
PWM (Da):   %s   14426.23  
PI (pH):   %s   5.22
Sequence
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Send to Peroxiscan
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QDKPQPPPEG RLPDATKGSD HLRQVFGKQM GLSDQDIVAL SGGHTLGRCH KERSGFEGAW TTNPLVFDNS YFKELLSGDK EGLLQLPSDK ALLSDPVFRP LVEKYAADEK AFFDDYKEAH 
LKLSELGYAD A 

Retrieve as FASTA  
Remarks Pseudogene (chromo 6). Large 5' part is missing. join(161909701..161909752,161909996..161910081,161910165..161910244,161910400..161910502,161910579..161910638)
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CAGGACAAGC CTCAGCCGCC ACCTGAGGGC CGTCTTCCTG ATGCCACCAA GGGTAGATTT CTAATCTTTA CTAGATTGGC ATGAATGCTG AGTTAATGGG TTACATTCAC CTTGCATCCT  TTGTTAAGTG TTTCAAAGGT GTTGTTTTGG CATCCCTGTA CCCAGCTTGC TTTGGGTAAC AGTGGTGCCT TGTAGCCGAG GCACCGTGTA GGCGTCCATA CCAAACACTG GTTTTGATGT  CACTTCTATT GACACGAGGA CTGGCACTTG TTGCTTGCTT TTTTTTTGAA ACCAGGTTCT GACCACCTGA GGCAAGTCTT TGGCAAGCAG ATGGGTTTGA GTGATCAGGA CATCGTTGCC  CTCTCTGGTG GCCACACCTT GGTTTGTTGC TGTCCACTCA TGTTTGATTC AGGAATGTAA TGTGTATGCC TGTACTGATT TAGTTTTCTT TGAGGTTTTA TTAGGGAAGG TGCCACAAAG  AGCGGTCTGG TTTTGAGGGG GCCTGGACTA CGAACCCTTT GGTCTTTGAC AACTCTTACT TCAAGTGAGT CTGTCTTGTT TACTATTGAA AAGCAACTGC ATTTAGTTAA GAAATACTTA  AAATTTGTTT ACCTTTGTTA TGTCATTACT GGGCAGCTGA ATGCTGTGCT AGAAATTAAT AGCCGTCCCA TATCTCCTAC TATTCCCATA TTTTCATAGG GAACTTCTGA GTGGTGACAA  GGAGGGCCTT CTTCAGCTCC CAAGTGACAA AGCCCTGCTG AGCGACCCTG TCTTCCGCCC TCTTGTGGAG AAATATGCTG CAGTATGTCC TTGGTCATTG TTATCCAGGG TATGGAGATT  CGTAGGGAGG CAAGTACTGA TTATCGTGTG CTCTGTAGGA TGAGAAGGCA TTCTTTGATG ACTACAAAGA GGCCCACCTC AAGCTCTCCG AACTGGGGTG AGTAACCATT GGTTGCACAA 
TTTGTGCTTG GTCAGTGGAA CAAATCTGAT CGTTTACTCT TCTGGGGTGC AGGTATGCTG ATGCTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CAGGACAAGC CTCAGCCGCC ACCTGAGGGC CGTCTTCCTG ATGCCACCAA GGGTTCTGAC CACCTGAGGC AAGTCTTTGG CAAGCAGATG GGTTTGAGTG ATCAGGACAT CGTTGCCCTC  TCTGGTGGCC ACACCTTGGG AAGGTGCCAC AAAGAGCGGT CTGGTTTTGA GGGGGCCTGG ACTACGAACC CTTTGGTCTT TGACAACTCT TACTTCAAGG AACTTCTGAG TGGTGACAAG  GAGGGCCTTC TTCAGCTCCC AAGTGACAAA GCCCTGCTGA GCGACCCTGT CTTCCGCCCT CTTGTGGAGA AATATGCTGC AGATGAGAAG GCATTCTTTG ATGACTACAA AGAGGCCCAC 
CTCAAGCTCT CCGAACTGGG GTATGCTGAT GCTTAA 

Retrieve as FASTA