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Entry information : ZmAPx[P]05(Zm00001d008414 / GRMZM5G858610)
Entry ID 8004
Creation 2011-02-18 (Christophe Dunand)
Last sequence changes 2011-02-18 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2023-01-09 (Christophe Dunand)
Peroxidase information: ZmAPx[P]05(Zm00001d008414 / GRMZM5G858610)
Name ZmAPx[P]05(Zm00001d008414 / GRMZM5G858610)
Class Ascorbate peroxidase     [Orthogroup: APx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmAPx[P]05
start..stop		 S start..stop
ZmAPx[P]06 260 6.56e-92 1..127 1..127
ZmAPx[P]04 260 6.56e-92 1..127 1..127
ZmAPx[P]03 260 6.56e-92 1..127 1..127
ZmAPx[P]07 258 3.37e-91 2..127 1..126
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 167529955..167530003 47 N° 2 167529626..167529711 84 N° 3 167529463..167529542 78 N° 4 167529205..167529307 101
N° 5 167529066..167529128 61  
complement(join(167529066..167529128,167529205..167529307,167529463..167529542,1 67529626..167529711,167529955..167530003))


exon

Literature and cross-references ZmAPx[P]05(Zm00001d008414 / GRMZM5G858610)
Protein sequence: ZmAPx[P]05(Zm00001d008414 / GRMZM5G858610)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   127
PWM (Da):   %s   14019.1  
PI (pH):   %s   5.63
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
QDKPQPPPEGRLPDATKGSNHLRQVFGKQMGLSDQDIVALSGGHTLGRCHKERSGFEGAWTTNPLVFDNSYFKELLSGDKEGLLQLPSDKALLSDPVFRPLVEKYAADEKAFFDDYKEAH
LKLSELG

Retrieve as FASTA  
Remarks Pseudogene from genomic (chromo 8). Large 5' part and last exon are missing. Incorrect prediction from Phytozome.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CAGGACAAGCCTCAGCCGCCACCTGAGGGCCGTCTTCCTGATGCCACCAAGGGTAGATTTCTAATCTTTACTAGATTGGCATGAATGCTGAGTTAATGAGTTACATTCACCTTGCATCCT
TTGTTAAGTGTTTCAAAGGTGTTGTTTTGGCATCCCTGTACCCAGCTTGCTTTGGGTAACAGTGGTGCCTTGTAGCCGAGGCACCGTGTAGGCGTCCAGACCAAACACTGGTTTTGATGT
CACTTCTATTGACACGAGGACTGGCACTTGCTGCTTGCTTTTTTTTTGAAACCACAGGTTCTAACCACCTGAGGCAAGTCTTTGGCAAGCAGATGGGTTTGAGTGATCAGGACATCGTTG
CCCTCTCTGGTGGCCACACCTTGGTTTGTTGCTGTCCACTCATGTTTGATTCAGGAATGTAATGTGTATGCCTGTACTGATTTAGTTTTCTTTGAGGTTTTATTATAGGGAAGGTGCCAC
AAAGAGCGGTCTGGTTTTGAGGGGGCCTGGACTACGAACCCTTTGGTCTTTGACAACTCTTACTTCAAGTGAGTCTGTCTTGTTTACTATTGAAAAGCAACTGCATTTAGTTAAGAAATA
CTTAAAATTTGTTTACCTTTGTTATGTCATTACTTGGCAGCTGAATGCTGTGCTAGAAATTAATAGCCGTCCCATATCTCCTACTATTCCCATATTTTCATATAGGGAACTTCTGAGTGG
TGACAAGGAGGGCCTTCTTCAGCTCCCAAGTGACAAAGCCCTGCTGAGCGACCCTGTCTTCCGCCCTCTTGTGGAGAAATATGCTGCAGTATGTCCTTGGTCATTGTTATCCAGGGTATG
GAGATTCGTAGGGAGGCAAGTACTGATTATCGTGTGCTCTGTATAGGATGAGAAGGCATTCTTTGATGACTACAAAGAGGCCCACCTCAAGCTCTCCGAACTGGGG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CAGGACAAGCCTCAGCCGCCACCTGAGGGCCGTCTTCCTGATGCCACCACAGGTTCTAACCACCTGAGGCAAGTCTTTGGCAAGCAGATGGGTTTGAGTGATCAGGACATCGTTGCCCTC
TCTGGTGGCCACACCTAGGGAAGGTGCCACAAAGAGCGGTCTGGTTTTGAGGGGGCCTGGACTACGAACCCTTTGGTCTTTGACAACTCTTACTTTAGGGAACTTCTGAGTGGTGACAAG
GAGGGCCTTCTTCAGCTCCCAAGTGACAAAGCCCTGCTGAGCGACCCTGTCTTCCGCCCTCTTGTGGAGAAATATGCTTAGGATGAGAAGGCATTCTTTGATGACTACAAAGAGGCCCAC
CTCAAGCTCTCCGAACTGGGG

Retrieve as FASTA