Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
185 |
PWM (Da): |
20523.44 |
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PI (pH):
| 8.21 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSSCSVRHNI KASATIKPP* KLQWLYYQNL CPDAKKYMWD HVEFYWKEDR TLAPNLI*LF YFDCFVGCDA LILFNGPDSK KTASQNAPLL ALPMETIDKA KEVLEHHCPG VVSCANIINL
AARDAVVLVC NMVCRMSHPF WTGRRDENSS SAKSVDLPLQ AVLGKAVLAY FKSxRGLNVL DLTTLLG
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic (frame shift, stop codon in frame, last exon is missing). No prediction from Phytozome. No EST.
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCTCAT GCTCAGTGCG GCACAACATC AAGGCATCAG CAACAATCAA ACCGCCGTAG AAGTTGCAGT GGCTTTACTA CCAAAATTTG TGCCCTGACG CCAAGAAGTA CATGTGGGAC
CATGTTGAGT TTTATTGGAA GGAAGACAGG ACCCTCGCTC CCAATCTCAT CTAACTATTT TACTTCGATT GCTTCGTCAC CGTACGTGTC ATATGTTTTT TTTCCCTTTC TCAGACGATC
TTGAACTTCG CATCGCTTGC ATCGCTTCAA TATCAGGTTT CCATCGCCTT TCTAAGCACA TGATACCCTT TCACCTAACG GTTTGAACCT CTCAAACCGG GCTTTCTAAT GTACCAGTTT
TTGTAAAACA GGGGTGTGAT GCGTTGATTC TATTCAATGG GCCAGATTCA AAGAAAACAG CATCGCAAAA TGCACCGCTT CTAGCGCTTC CTATGGAGAC GATTGACAAG GCCAAGGAAG
TCCTGGAACA CCATTGTCCC GGGGTAGTAT CTTGCGCCAA CATAATCAAC CTTGCTGCTA GAGATGCTGT TGTCTTGGTA TGCAACATGG TTTGCAGTTT TTTTCCTTTT TGAGCTTGAA
AAGAGATCGT TTAGGCTGCT GCACTGATGA TTGACATGCT GTTAGCTTGA GTTTTGGAGC GTTCGATATG GAAAAAAATT AGAATTATTG ATGCAATAAT GATGCTGCGA CATGCGGGAG
GGATGTCGCA CCCCTTTTGG ACGGGGAGAA GGGACGAGAA TTCATCCTCC GCAAAGTCAG TGGACCTCCC GTTGCAGGCT GTCCTGGGGA AAGCGGTGCT CGCTTACTTC AAATCAAnnA
GGGGTTTGAA TGTGCTAGAC CTCACTACTC TACTTGGC
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCTCAT GCTCAGTGCG GCACAACATC AAGGCATCAG CAACAATCAA ACCGCCGTAG AAGTTGCAGT GGCTTTACTA CCAAAATTTG TGCCCTGACG CCAAGAAGTA CATGTGGGAC
CATGTTGAGT TTTATTGGAA GGAAGACAGG ACCCTCGCTC CCAATCTCAT CTAACTATTT TACTTCGATT GCTTCGTCGG GTGTGATGCG TTGATTCTAT TCAATGGGCC AGATTCAAAG
AAAACAGCAT CGCAAAATGC ACCGCTTCTA GCGCTTCCTA TGGAGACGAT TGACAAGGCC AAGGAAGTCC TGGAACACCA TTGTCCCGGG GTAGTATCTT GCGCCAACAT AATCAACCTT
GCTGCTAGAG ATGCTGTTGT CTTGGTATGC AACATGGTTT GCAGGATGTC GCACCCCTTT TGGACGGGGA GAAGGGACGA GAATTCATCC TCCGCAAAGT CAGTGGACCT CCCGTTGCAG
GCTGTCCTGG GGAAAGCGGT GCTCGCTTAC TTCAAATCAA nnAGGGGTTT GAATGTGCTA GACCTCACTA CTCTACTTGG C
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Retrieve as FASTA
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