Entry information : EgrPrx[P]14
Entry ID 8015
Creation 2011-02-09 (Qiang Li)
Last sequence changes 2012-02-16 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-22 (Christophe Dunand)
Peroxidase information: EgrPrx[P]14
Name EgrPrx[P]14
Class Class III peroxidase     [Orthogroup: Prx046]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]14
start..stop
S start..stop
EglPrx[P]14 380 1e-137 1..187 1..187
EguPrx[P]14 366 5e-132 1..187 1..187
EgrPrx[P]03 343 7e-123 1..173 1..173
EcamPrx[P]03 260 7e-91 1..134 1..133
Literature and cross-references EgrPrx[P]14
DNA ref. Phytozome 12:   scaffold_1 (3824882..3825757)
Protein sequence: EgrPrx[P]14
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   185
PWM (Da):   %s   20523.44  
PI (pH):   %s   8.21
Sequence
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Send to Peroxiscan
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MSSCSVRHNI KASATIKPP* KLQWLYYQNL CPDAKKYMWD HVEFYWKEDR TLAPNLI*LF YFDCFVGCDA LILFNGPDSK KTASQNAPLL ALPMETIDKA KEVLEHHCPG VVSCANIINL 
AARDAVVLVC NMVCRMSHPF WTGRRDENSS SAKSVDLPLQ AVLGKAVLAY FKSxRGLNVL DLTTLLG 

Retrieve as FASTA  
Remarks Pseudogene from genomic (frame shift, stop codon in frame, last exon is missing). No prediction from Phytozome. No EST.
DNA
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ATGAGCTCAT GCTCAGTGCG GCACAACATC AAGGCATCAG CAACAATCAA ACCGCCGTAG AAGTTGCAGT GGCTTTACTA CCAAAATTTG TGCCCTGACG CCAAGAAGTA CATGTGGGAC  CATGTTGAGT TTTATTGGAA GGAAGACAGG ACCCTCGCTC CCAATCTCAT CTAACTATTT TACTTCGATT GCTTCGTCAC CGTACGTGTC ATATGTTTTT TTTCCCTTTC TCAGACGATC  TTGAACTTCG CATCGCTTGC ATCGCTTCAA TATCAGGTTT CCATCGCCTT TCTAAGCACA TGATACCCTT TCACCTAACG GTTTGAACCT CTCAAACCGG GCTTTCTAAT GTACCAGTTT  TTGTAAAACA GGGGTGTGAT GCGTTGATTC TATTCAATGG GCCAGATTCA AAGAAAACAG CATCGCAAAA TGCACCGCTT CTAGCGCTTC CTATGGAGAC GATTGACAAG GCCAAGGAAG  TCCTGGAACA CCATTGTCCC GGGGTAGTAT CTTGCGCCAA CATAATCAAC CTTGCTGCTA GAGATGCTGT TGTCTTGGTA TGCAACATGG TTTGCAGTTT TTTTCCTTTT TGAGCTTGAA  AAGAGATCGT TTAGGCTGCT GCACTGATGA TTGACATGCT GTTAGCTTGA GTTTTGGAGC GTTCGATATG GAAAAAAATT AGAATTATTG ATGCAATAAT GATGCTGCGA CATGCGGGAG  GGATGTCGCA CCCCTTTTGG ACGGGGAGAA GGGACGAGAA TTCATCCTCC GCAAAGTCAG TGGACCTCCC GTTGCAGGCT GTCCTGGGGA AAGCGGTGCT CGCTTACTTC AAATCAAnnA 
GGGGTTTGAA TGTGCTAGAC CTCACTACTC TACTTGGC 

Retrieve as FASTA  
CDS
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ATGAGCTCAT GCTCAGTGCG GCACAACATC AAGGCATCAG CAACAATCAA ACCGCCGTAG AAGTTGCAGT GGCTTTACTA CCAAAATTTG TGCCCTGACG CCAAGAAGTA CATGTGGGAC  CATGTTGAGT TTTATTGGAA GGAAGACAGG ACCCTCGCTC CCAATCTCAT CTAACTATTT TACTTCGATT GCTTCGTCGG GTGTGATGCG TTGATTCTAT TCAATGGGCC AGATTCAAAG  AAAACAGCAT CGCAAAATGC ACCGCTTCTA GCGCTTCCTA TGGAGACGAT TGACAAGGCC AAGGAAGTCC TGGAACACCA TTGTCCCGGG GTAGTATCTT GCGCCAACAT AATCAACCTT  GCTGCTAGAG ATGCTGTTGT CTTGGTATGC AACATGGTTT GCAGGATGTC GCACCCCTTT TGGACGGGGA GAAGGGACGA GAATTCATCC TCCGCAAAGT CAGTGGACCT CCCGTTGCAG 
GCTGTCCTGG GGAAAGCGGT GCTCGCTTAC TTCAAATCAA nnAGGGGTTT GAATGTGCTA GACCTCACTA CTCTACTTGG C 

Retrieve as FASTA