Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
356 |
PWM (Da): |
38340.49 |
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PI (pH):
| 6.82 |
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Sequence 398
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MMGASFVSTVPSLLPLQAQVAPPSSSTSSSAAPVRPPAARPVAVRCKTENGFADGGEELSRRDVLKLVGASVGIELMASSGSFVESARAADLIQRRQRSEFLSNVRGTLFTAIKGNPDLIPSLLMLALNDAMTYDKASKSGGPNGSIRFSSEISRPENKGLSAAMNLLEEAKKEIDSYSKGGPMSYADLIQYAAQSALKATFLASAIRKCGGNEEKGGLLYTAYGSSGQWGLFDKQFGRSDTTEPDPEGRVPQWEKASVKEMKDKFSAIGFGPRQLAVMSLFLGPDQTATETLLAADPDVSPWVQKYQRSRETVSETDYEVDLITTLTKLSSLGQQINYEAYTYPVPRVDFSKLKL* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic. Correct prediction from phytozome. Three other alternative transcripts predicetd from Phytozome: Egrandis_v1_0.017819m, Egrandis_v1_0.018242m, Egrandis_v1_0.018783m. |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGATGGGCG CGTCCTTCGT CTCCACCGTC CCTTCTCTG
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGATGGGCGCGTCCTTCGTCTCCACCGTCCCTTCTCTGCTCCCGCTTCAAGCTCAAGTCGCTCCTCCTTCTTCTTCCACCTCGTCTTCCGCCGCCCCCGTCAGGCCCCCCGCCGCTCGT CCCGTTAGTCTTCCTCCTCGCTTCCGCTTTTTTTGCTTCGAAATCCGGCATTGTGAATTGCTCTCGTCGGTGTCCGCGCTCGACGCTGCGTAGTTGAGCCTCCTGATCGGTGTGTAATGC TTGTCGTCTTCTCCGGTCGTCGAAAGTTCAGGTTGCGGTTCGCTGCAAGACGGAGAACGGCTTCGCCGATGGCGGCGAGGAGTTGAGCCGACGAGACGTTCTTAAACTCGTCGGCGCTAG CGTCGGCATTGTAAGTGCGATTCCTCCCGTTGTTTAGCCGTTACGTCAGCTACATTGAGCTCCGTGAATGTGATCTTCCGTATGTTTTATCTGTCTGCTCGGTCGCGATTAAGATTTCGT TCTGGTTCGCCGTTTGACCTTTGGCTTTGTGGAAATGACGGTCCGTTCTTTTAGCGTGGATGTTGATGAGTTTCTGCCAGCTGTGATCTCGCAGGAACTGATGGCGAGCTCTGGATCATT CGTTGAATCGGCTCGTGCTGCTGATTTGATTCAACGCCGGCAGCGTTCCGAGTTTCTTTGTAAGCCCCCGCTGAAGAGTCGCTTCTTTTTCTATTGCTAGTGCATTGAAATATGAATCTC CAGAATCAAATTGACTTCCTTCTGTGTCCTCAGCAAATGTCAGGGGCACCCTTTTCACGGCTATAAAGGTGAATTTTTGTTATGCTTTGGCATTTAGGCATATGATTTTGGCTCTCGTGA TTTTGTTACACATATCCTAAAATGCTATACTTTGATATAAATTTATTAATTGATTTCTCTCTTGGACTCATTTCAGGGAAATCCAGATCTCATCCCATCTTTACTGATGTTGGCATTAAA TGATGCTATGACTTATGACAAGGTCACACTTAGATTTTGCATGTTGAAATTTAATGGGAATAGTTCATCTCACTAAGTATGATTAGGTAATGATTGAGTTATGATTTATTTTCCCTCAAG CTTGCAGGCCTCAAAGTCTGGAGGCCCAAATGGATCCATAAGGTTCAGGTACTTGTCACATTAAAACATGTGAATGCTGATGTGAGTTGATGATCATAGCGCAGAGCAGTATTTTCAATT TGTTGGGTTTAGTGAGCCCCCTAATTTCGATTTTCTGAGGGTTGAACTCTTCACACAACCGGCTCCCTCTCAGAATGATAATCTAGCGAGGTCTTTGTTTCACACAACCGGCTCCCTCTT ATATGCAGTTCTATATTACTAATTCAATCTTATCCAGAAATCTCCATTTAGAGAATCAAGAAGCTGAGCATCTAGAGTTAATTGAGGAAAATAGAAAGAGAAAACTTGATTGCCCCGCAG GATGGTTCCCATGTTTCAAGTTCTCATGTGTATCTTCCAGTTTAAAATTTCATGCTTTTGCCGCACATCTGTTATCTCCTAGATGAGACTCACCATGATTTCCAATGTCATGAACTGTTA TTTCTTGAAGCTCAGAGATTAGCAGACCTGAGAATAAGGGCCTTTCAGCTGCCATGAACTTATTGGAGGAAGCTAAGAAGGAAATAGATTCATATTCCAAGGGCGGACCCATGTCCTATG CAGATCTTATACAGTATGCAGGTTTGTACATGTTACATAGCTAAGTTGCATGTCCCTAGCATAAAATGCTGCTCTTGGTCTGGACTTCTGTTAGTACCTTCTAGAATAACCCCCAAAAGA AGAAGTATTCACTAGAGCCATTAGGCTTGGGGATCTGGCTTTGAATATCTTATGCCATGTATTGAAAGTTCTGCCTCTGAACAGCGCAGAGTGCACTCAAGGCTACCTTTCTAGCTTCAG CCATTCGCAAATGTGGTGGGAATGAAGAGAAAGGGGGCCTGCTCTACACTGCCTATGGTTCCAGCGGACAGGTAATTCCTAATTCGTTGTGTGCATGGAATCTTATGCGTTTGCCACCAG ATTTTATAGTGTAAAATCAACAACGAAATAGGAATAAAATTTCCTACAACTAGTAATTTAGTATTCATAATGTGTTACCGTCAGGACTTTTAGTCAGTGTATCTTGGGAGGTGAACTAGT TTAGGTATAGGTATAGATAAGTCTAAAATTTACTTGCAGCCAGTAGTTTCTCGGGGAATATTCAAAAAATGGTTTCATGCTAAACAACAGATGAAGGATTTGTTTCAGAACGTATTCCTT CATCTGACGATTGCCATAAAATACCGTGTTTATTGACCATTTGTTGTTGCTCACTATTGCTATGTTCATTCAATAGCTTGATTCTTGAATACATGTTCGGAAAAAAAAATGATCCCTATA GTTTACCAATTTTTCCTTTGAATATATTGGAAATAAACCTATGAATAACATAACAACTGCCTTGACATATTGTTTCTCAAATAATTCTCATAGTTTTAGTTCTGATTTTCATATTACATA AATCGTCCCGTCATGCAGTGGGGCTTGTTTGACAAACAATTTGGGAGGTCAGACACCACGGAACCAGATCCAGAAGGTAGGGTCCCCCAGTGGGAGAAGGCCAGCGTGAAGGAAATGAAA GATAAATTCTCAGCCATTGGGTTTGGTCCTCGGCAGGTATATTCAGTAGAACATTTACTGCTTATGCAGGAATACTCTGAACTTCCATACATATTGTCCTCTTTATGCACCAAGAATTTC ATCTACAAAATTGCAATGGGAAAACAAGGTTATCTTTTCACCATTTCCAGAAACCAAGAGACATGCGGCTGAACAAGCAGTCTCATGATGTGCACTGCATTCAGATATATTTGATGATTC ATTTCTCTATTATGTTAATCTTCTCTGAATTAGCTAGATTCTTTTCTTAAATTTCCATACCATATATTTTTTTTTTGGTAAGGTATTTCCATACCATATATTGTTTTCTGCATCTTTATA TTTTTGGAAATTTTTTCAAAGCTCAAAATTGGAGAATTGAATGTGGTTTTCTGTTAAATGATCTCTATTTGCAGATTGGTCTTGTAATGAGATTTAAACATTCTCAGCGTTGCTTCCCGT CAATCTCGAAAACTGGTAGTCAATGATGGACTGCATAGGAACTAAATCTGCTTTTAACTTCTTGACTGAACAGCTAGCAGTGATGTCTTTGTTTCTGGGTCCTGATCAGACAGCAACAGA GACATTATTAGCAGCCGATCCAGATGTGTCTCCATGGGTTCAAAAATACCAAAGAAGCCGAGAGACTGTGTCGGAGACAGATTATGAGGTTGGTTATACAAAGTTGCTCTTTTCAGAATG TGAAAGCCTTACTTGATATTTGCCATCATGGTGGTGAAGAATAACCGAAGAAAAACAATATTATGGCCTTCTGTGCCCCAAAAAAAAACAGAATCTCTGAATCGTAATCGATTTGTTGGC CAAAAAGAATAGTTAATGTAAGCGTCTTAGAATCGTTGCGTTCGCTTCACTCGGACATTGATCTTAATCCCGTCTTTTTACAGGTCGATTTGATAACTACTCTGACCAAATTAAGCAGCT TGGGCCAACAAATCAATTACGAAGCGTACACCTACCCGGTTCCAAGGGTTGATTTCAGCAAGCTCAAATTGTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGATGGGCGCGTCCTTCGTCTCCACCGTCCCTTCTCTGCTCCCGCTTCAAGCTCAAGTCGCTCCTCCTTCTTCTTCCACCTCGTCTTCCGCCGCCCCCGTCAGGCCCCCCGCCGCTCGT CCCGTTGCGGTTCGCTGCAAGACGGAGAACGGCTTCGCCGATGGCGGCGAGGAGTTGAGCCGACGAGACGTTCTTAAACTCGTCGGCGCTAGCGTCGGCATTGAACTGATGGCGAGCTCT GGATCATTCGTTGAATCGGCTCGTGCTGCTGATTTGATTCAACGCCGGCAGCGTTCCGAGTTTCTTTCAAATGTCAGGGGCACCCTTTTCACGGCTATAAAGGGAAATCCAGATCTCATC CCATCTTTACTGATGTTGGCATTAAATGATGCTATGACTTATGACAAGGCCTCAAAGTCTGGAGGCCCAAATGGATCCATAAGGTTCAGCTCAGAGATTAGCAGACCTGAGAATAAGGGC CTTTCAGCTGCCATGAACTTATTGGAGGAAGCTAAGAAGGAAATAGATTCATATTCCAAGGGCGGACCCATGTCCTATGCAGATCTTATACAGTATGCAGCGCAGAGTGCACTCAAGGCT ACCTTTCTAGCTTCAGCCATTCGCAAATGTGGTGGGAATGAAGAGAAAGGGGGCCTGCTCTACACTGCCTATGGTTCCAGCGGACAGTGGGGCTTGTTTGACAAACAATTTGGGAGGTCA GACACCACGGAACCAGATCCAGAAGGTAGGGTCCCCCAGTGGGAGAAGGCCAGCGTGAAGGAAATGAAAGATAAATTCTCAGCCATTGGGTTTGGTCCTCGGCAGCTAGCAGTGATGTCT TTGTTTCTGGGTCCTGATCAGACAGCAACAGAGACATTATTAGCAGCCGATCCAGATGTGTCTCCATGGGTTCAAAAATACCAAAGAAGCCGAGAGACTGTGTCGGAGACAGATTATGAG GTCGATTTGATAACTACTCTGACCAAATTAAGCAGCTTGGGCCAACAAATCAATTACGAAGCGTACACCTACCCGGTTCCAAGGGTTGATTTCAGCAAGCTCAAATTGTGA |
Retrieve as FASTA
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