View Redoxidase 8042

Entry information : HaPrxII01 (HanXRQChr08g0228231)

Entry ID	8042
Creation	2011-02-04 (Christophe Dunand)
Last sequence changes	2016-05-10 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaPrxII01 (HanXRQChr08g0228231)

Name (synonym)

HaPrxII01 (HanXRQChr08g0228231)

Class

Atypical 2-Cysteine peroxiredoxin (type II) [Orthogroup: PrxII001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaPrxII01 start..stop	S start..stop
VvPrxII05	311	2.58e-109	34..204	40..210
HaPrxII04	307	1.01e-107	1..203	1..210
PtPrxII05	305	8.85e-107	6..206	3..218
PtrtrPrxII05	305	1.33e-106	6..206	3..218

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8042' 'complement(join(93846556..93846594,93846651..93847265))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	93846651..93847265	613	N° 2	93846556..93846594	37
complement(join(93846556..93846594,93846651..93847265))

Literature and cross-references HaPrxII01 (HanXRQChr08g0228231)

DNA ref.	HanXRQ genome: HanXRQChr08 (93847265..93846556)
EST ref.	GenBank: DY918118.1

Protein sequence: HaPrxII01 (HanXRQChr08g0228231)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	217 (429)
PWM (Da):	23025.75 (46426.4)
PI (pH):	7.02 (9.39)	Peptide Signal:	cut: 33 range:33-461

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MATATASLSFTRLLSSATKPHRSFTHHHRSLSFKPLKFSTKISAT
ISVGDKLPDATLSYFDSSDELQTTTISDLTKSKKTILFAVPGAFTPTCSQKHLPGFVEKSGELKSKGVDTIACVS
VNDAFVMKAWKADLGIGDEVLLLSDGNGEFTRAIGCELDLS
DKPVGLGVRSRRYAMLVEDGVVKVLNLEEGGAFTSSGAEDMLKAVNNVSCDVGCLV*

Retrieve as FASTA

Remarks

Complete sequence from EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCACCGCAACCGCTTCACTCTCCTTCACCAGACTCCTCTCTTCCGCCACCAAACCCCACCGCTCCTTCACCCACCACCACCGCTCCCTCTCCTTCAAACCCCTCAAATTCTCCACC
AAAATCTCCGCCACCATCTCCGTCGGCGACAAACTCCCTGACGCCACCTTATCCTACTTCGACTCCTCCGACGAACTCCAAACCACCACCATCTCCGACCTCACCAAATCCAAAAAAACC
ATCTTATTCGCCGTCCCGGGCGCCTTCACACCCACCTGCTCCCAAAAACACCTTCCGGGATTCGTGGAAAAATCCGGCGAGTTAAAATCAAAGGGTGTGGATACAATCGCGTGTGTTTCG
GTTAACGATGCGTTTGTGATGAAGGCTTGGAAGGCTGATTTGGGAATTGGGGATGAAGTGTTGCTACTGTCTGATGGGAATGGGGAGTTTACTCGAGCCATTGGGTGTGAACTGGATTTG
AGTGATAAACCGGTTGGGTTAGGGGTGAGGTCCAGGAGGTATGCTATGCTTGTTGAAGATGGGGTTGTTAAGGTGTTGAATCTTGAAGAAGGTGGGGCTTTTACTTCTAGTGGTGCTGAG
GATATGCTTAAAGCTGTTTGATTGAGGTTTGTTTTGTAAGTGGTTGTTGCTTACGTGCTTGTTTTTTTTAGGTGTTAATAATGTGAGTTGTGATGTTGGATGCTTGGTTTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

CCACCACAAC TACCACCGCC ATGGCCACCG CAACCGCTTC ACTCTCCTTC ACCAGACTCC TCTCTTCCGC CACCAAACCC CACCGCTCCT TCACCCACCA CCACCGCTCC CTCTCCTTCA AACCCCTCAA ATTCTCCACC AAAATCTCCG CCACCATCTC CGTCGGCGAC AAACTCCCTG ACGCCACCTT ATCCTACTTC GACTCCTCCG ACGAACTCCA AACCACCACC ATCTCCGACC TCACCAAATC CAAAAAAACC ATCTTATTCG CCGTCCCGGG CGCCTTCACA CCCACCTGCT CCCAAAAACA CCTTCCGGGA TTCGTGGAAA AATCCGGCGA GTTAAAATCA AAGGGTGTGG ATACAATCGC GTGTGTTTCG GTTAACGATG CGTTTGTGAT GAAGGCTTGG AAGGCTGATT TGGGAATTGG GGATGAAGTG TTGCTACTGT CTGATGGGAA TGGGGAGTTT ACTCGAGCCA TTGGGTGTGA ACTGGATTTG AGTGATAAAC CGGTTGGGTT AGGGGTGAGG TCCAGGAGGT ATGCTATGCT TGTTGAAGAT GGGGTTGTTA AGGTGTTGAA TCTTGAAGAA GGTGGGGCTT
TTACTTCTAG TGGTGCTGAG GATATGCTTA AAGCTGTTAA TAATGTGAGT TGTGATGTTG GATGCTTGGT TTAGGATGTT TGGATTGAGA AATA

Retrieve as FASTA