Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
262 (304) |
PWM (Da): |
28509.52 (32725.7) |
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PI (pH):
| 8.86 (8.76) |
Peptide Signal:
| cut: 22 range:22-325 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GVLPHNNEKS AEASKTLGGF EIIDDIKTEL EKSCPRTTSC TDILTAAARD ATVSAGGPYW MVPYGRKDGR VSVAGEADKV PMGHENITSL LQLFQSQGLN VLDLVVLLGA HTIGRSACRP
VQSRLYNYKS TGKPDPTRxL DPQYANYLKR KCRRASEYVD LDRTTPRAFD NAYYKNLQRK TGLLSTDQYL YSDSRTGPLV AALATQPDVF SYQFGVSMAK LGNVQVLTGD EGEVRTEARS
APTATPAIAT NYFSKFIRIC LL
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic (exon 1 and DAS are missing, frame shift after VALS). No prediction from Phytozome. No EST. join(6893795..6894119,6894423..6894885). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGTGTTCTTC CGCACAACAA CGAGAAGAGC GCTGAAGCGA GCAAGACCCT TGGGGGGTTC GAGATAATCG ACGACATAAA GACAGAGCTT GAGAAGAGCT GCCCGAGGAC AACATCATGC
ACCGACATCC TAACTGCAGC CGCGAGGGAT GCCACTGTTT CAGCCGGCGG GCCATACTGG ATGGTGCCGT ACGGACGCAA GGATGGGAGA GTCTCCGTCG CCGGGGAGGC CGACAAGGTG
CCGATGGGCC ACGAGAACAT CACGTCGCTC CTCCAGCTCT TCCAATCCCA AGGATTAAAT GTCCTTGACT TGGTTGTTCT CTTAGGCGAA CTTCTTTTAT TTCTTCTATT TTCAAAAATC
AATGAATAAA AAAAAAATAT ATATATATAT ATATATATAT ATATATTAAA ATCTAAAACA CTATGTTCCA TTTACTCACA GATGAAAGTG AGATGAAATT TGATTATTTA TTATTTATAT
TGCAACGTTA GTCTCAAGGG TGATTTTCGA ATGGATGTAA GGAATAATTT ATGAAATTTT GCGGTACATT TTTATCATTA TTTTTTCTTT CTTCTTGATT TTTGCATTTC ATAATAAAGT
CGTAAAAACT GTTACAATCT CGGCGTAGGC GCGCACACGA TAGGGCGAAG CGCCTGCAGG CCTGTCCAAT CACGGCTCTA CAACTACAAG TCCACCGGAA AGCCCGACCC GACCCGATCn
CTAGACCCGC AGTACGCCAA CTACCTGAAG CGGAAGTGCC GGCGGGCGTC GGAGTACGTG GACCTCGACA GGACGACGCC GAGAGCCTTC GACAACGCGT ACTACAAGAA CCTGCAGAGG
AAGACCGGCC TCCTCTCCAC CGACCAGTAC CTCTACTCCG ACTCCCGGAC GGGGCCGCTT GTGGCGGCGC TCGCCACCCA GCCCGACGTC TTCAGCTACC AGTTCGGCGT TTCCATGGCC
AAGCTCGGCA ACGTCCAGGT GCTCACCGGC GACGAAGGCG AGGTCCGCAC CGAGGCGAGG TCCGCACCGA CTGCAACGCC GGCAATCGCT ACTAATTATT TTTCCAAATT TATTCGAATT
TGTCTATTAT AA
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Retrieve as FASTA
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