Entry information : EgrPrx[P]104
Entry ID 8051
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2011-02-08 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Qiang Li
Last annotation changes 2012-02-28 (Qiang Li)
Peroxidase information: EgrPrx[P]104
Name EgrPrx[P]104
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]104
start..stop
S start..stop
EcamPrx[P]104 135 3e-44 9..77 1..69
MePrx12 130 3e-39 1..77 264..340
EgrPrx110 130 7e-39 1..77 263..339
EcamPrx103 127 9e-39 1..77 184..260
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 29585395..29585628 234  
join(29585395..29585628)


exon

Literature and cross-references EgrPrx[P]104
DNA ref. Phytozome 12:   scaffold_7 (29585395..29585628)
Protein sequence: EgrPrx[P]104
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   77
PWM (Da):   %s   8684.26  
PI (pH):   %s   5.72
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

NSYYNLLLNG EGLLISDQEL YSSALAIQTK KIAVQYAHDM AAFFQQFSES MVKMGNITNS DSFVNGEVRK NCRFINT* 

Retrieve as FASTA  
Remarks Pseudogene from genomic (end of exon 4). No prediction from Phytozome. No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AACTCCTACT ACAACTTGCT CTTGAATGGA GAGGGATTAC TCATCTCCGA CCAAGAACTG TATTCAAGTG CATTGGCGAT TCAGACCAAG AAGATTGCGG TACAGTATGC GCATGACATG 
GCGGCTTTCT TCCAGCAGTT CTCAGAATCC ATGGTCAAGA TGGGGAACAT CACGAATTCG GATAGCTTTG TCAATGGAGA AGTGAGGAAG AACTGCAGAT TTATCAATAC ATGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AACTCCTACT ACAACTTGCT CTTGAATGGA GAGGGATTAC TCATCTCCGA CCAAGAACTG TATTCAAGTG CATTGGCGAT TCAGACCAAG AAGATTGCGG TACAGTATGC GCATGACATG 
GCGGCTTTCT TCCAGCAGTT CTCAGAATCC ATGGTCAAGA TGGGGAACAT CACGAATTCG GATAGCTTTG TCAATGGAGA AGTGAGGAAG AACTGCAGAT TTATCAATAC ATGA 

Retrieve as FASTA