RedOxiBase: View Perox 8058

Entry information : EgrPrx100 ( Eucgr.G00658 / Egrandis_v1_0.019477m)

Entry ID	8058
Creation	2011-02-04 (Christophe Dunand)
Last sequence changes	2011-02-08 (Christophe Dunand)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2016-03-13 (Christophe Dunand)

Peroxidase information: EgrPrx100 ( Eucgr.G00658 / Egrandis_v1_0.019477m)

Name (synonym)

EgrPrx100 ( Eucgr.G00658 / Egrandis_v1_0.019477m)

Class

Class III peroxidase [Orthogroup: Prx014]

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus grandis [TaxId: 71139 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EgrPrx100 start..stop	S start..stop
EglPrx100	655	0	1..324	1..324
EguPrx100	650	0	1..324	1..324
EcamPrx100	628	0	1..324	1..317
CclPrx116	475	2e-170	11..311	8..308

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	11400166..11400375	210	N° 2	11399819..11400001	183	N° 3	11399387..11399549	163	N° 4	11397144..11397562	419
complement(join(11397144..11397562,11399387..11399549,11399819..11400001,1140016 6..11400375))

Literature and cross-references EgrPrx100 ( Eucgr.G00658 / Egrandis_v1_0.019477m)

DNA ref.	Phytozome 12: scaffold_7 (11400375..11397144)

Protein sequence: EgrPrx100 ( Eucgr.G00658 / Egrandis_v1_0.019477m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	324 (301)
PWM (Da):	35364.54 (32779.3)
PI (pH):	4.84 (4.92)	Peptide Signal:	cut: 24 range:24-324

Sequence 366
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDLELSRVLALLAYCCLMGTGNAQLRFGFYGQTCPSAEPIVRSVVRNAVISNPNMAAILLRLHFHDCFVEGCDGSILIENGRSAERNAFGHQGVGGFEVIEEAKKHLEVTCPGVVSCADIVALAARDAVAMANGPDYEVPTGRRDGRVSNVSLAEDMPDVGNSIQQLKSKFFQKGLTEKDLVLLSAAHTIGTTACFFMTDRLYNFMPGGGSDPSINPDFLPELKSMCPQNGDVNVRMPIDHGSEQTFDDQILRNIRSGWAILESDAKLNDDPVTRSVIESYVGLFNPIFGPSFEAEFVESMVKMGQIGVKTRVKWRDQAGLQIF*

Retrieve as FASTA

Remarks

Complete sequence from genomic (3 introns). GEIR is missing but present in another frame

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGATCTAGAACTCTCACGGGTTCTTGCACTACTCGCTTATTGTTGCTTGATGGGAACGGGTAATGCGCAGCTCAGATTCGGTTTCTACGGCCAAACCTGCCCTTCTGCCGAGCCCATA
GTGAGATCCGTCGTTCGAAATGCGGTCATCTCCAACCCCAACATGGCCGCCATCTTGCTTCGCCTTCACTTCCATGACTGCTTTGTCGAGGTCTCTCTCTCGCTCAATATGCTCTGCTTT
CCTCATATCATGACTAGTAATGCTTCAAAAGTTGAAAGATTCTTGATAGATAAATGCTCTTGAATAAGACCCTTTTATCTAGGAATGAGACTGTTAAGGTCGATCTTGTGATTTTGATGC
TATGTATCTTTTAGGGATGTGATGGTTCGATTCTTATAGAGAACGGGCGAAGTGCGGAGAGGAATGCGTTCGGGCACCAAGGGGTGGGCGGATTTGAGGTGATCGAGGAAGCCAAGAAGC
ACCTCGAGGTCACTTGCCCCGGTGTCGTCTCGTGCGCCGACATTGTTGCCTTAGCGGCTAGAGATGCTGTCGCAATGGTTCGCCTCTCTTTTATTTGTGTTCTCTTGATTTGCACATATA
TATTAGTTGTCTGTTTAGGATGATCATATATGGATGTACCATGAGTCAATTATCTAGTATGCCTAGGATGGATTTTTCGTATACTCATGAATCAGTATCATGATTGAATATGAATTCCGA
ATAGAATGATGCGCGAAATTAGTACAATGGCCGGATAATTGTTACAAACTGAATTTATGAAGTGACATGACAAATTGACAACACACTTATATTAATGTGTGTGAAGGCAAATGGGCCTGA
TTATGAGGTTCCGACGGGGCGCCGGGATGGGAGGGTGTCAAATGTGTCGCTGGCCGAGGACATGCCGGACGTCGGCAACTCCATCCAACAGCTCAAGTCCAAGTTCTTCCAGAAAGGCCT
CACCGAAAAGGACCTCGTCCTCCTAAGCGGTACAGCCCCTCTCTCTCTCTCTACCACTCTCTCTCTCCCTCTACCCATGCTGATATGATGAGCTGATGTTGGTTTGGAAGCCTAAAAAAC
ATGAAAAAGGTGTCATCAATCGTCATGTTGGAGCATCAAAATTAGAATTTCGTTTGGCTGGTTTTAGGTGGGTAAGAAACAGATTATTCTACTCACATTCTCAACTACATACAATGACAC
ATCCTTCAACGATGACTCTTTGTAATTAGGCTTGTAATCCAATTTCACAATTCTTAAAATCGTCCAAGACTACAAGGATTGGGAAAAATTACGAAAAATGTTAGGAATATATTGTACAAA
TACCAAATCAATCATAAACTTTTCAATTTGGTCAATTTAATCATAAACCTTTTAAGCATATGTCAATATTCCATCCAAATTTGGCTAGATCTTATTGATATAGACGCCAAAGGTCCTACG
TGACACAGTTGACGCTAACATGTACAATTATTTTGCATTTTTAATTTTTTTTCTTTTTTTTTTCTTTTCTTTTCTTTTTGTTTCTTTCTCTTTCTTACGGCCTCGTTATTAAATAATAAA
AAAATCCAAAACACTGCAAAAATCATCTATGTTAGTGCCAGTTGTGGCATATAAGGCAAATGTCATTTATATTAGTAATTTCCAACCAAAATTGGCCGGAATGACTAAATTAACAAATTG
TCCAAAGGTTTATTACTATGTTGACTAAATTGAAAAGTTTAAGACTAGATTGACATCCACATATTTTTTGGTAATTATCTTATAGTAAATTAATATTAGAGATGAGCGGTTTTAAGCTCC
ATACAAGTTCCACTTGAAACCTAGAATTTGGAACATATCCATTTAAATAGATTTCTCATTTTCTAGAACTTAAAATCTATCATGGGGACTTTGGAACCTAGAACCCATCTTATCACAGAT
TCTAAAGTTAGTTCCAAGATCTACATAAGTTTCACCTTTATTATTAATAGGATAATTGCAATAAATTATCACTTTTAATAATCGTCAATTGTTGCCACAATCTATCAATCATAATTTATA
TTTGGATACACGAAAAATATGAAATATTATAAAGTAAATGTTTTAATCATAAAATAGAAGCTCAGACTAGTGATCCCAGATTATACATTCATAATCAAATGCCATAGAATACTACAAGAT
CGTGCAAAAACATAGCCAAGAAAAACATAGAAATTCATTTTGGATTCCAAGTTTTGGGTTTTGGGTTTTGGGTTTAAGGTTCAAAGTTTCATTAACCTAGAATTTAGGACCTACTCATCG
AAACATAATTTTCAATTTTTGAAACCTGAAACTACCCTGCATACCTTGAAATCTAGAACTTAACATGTTATTACCATTGGTTCAGTTCTTAGATTTTAGGTTCTACCCCAAAACCATATC
TATCCCTAATTGATATAATGGCCGTGTTATGTGGTCTCTCTTGCTTCCATATATCATCAAAAATTTCTTTCCTTAAGCTAAGTATGTACTTACAACTTCATTTTTTTTAAATATAAATAT
TTTTAATATAATTTTAAAAGTTCATATAGTGTTATATGTGAATATTTTTTTAGGTATTCGGTATTAAATATCGAATCCTAAAGAATAAAGAGATAGTAACAATGGCAATGGCTTGAACTC
CACATTGATTTCTCCTGAACCATGAACCAACTTGAGATTATTCAAGTAAACCTAAGCTGACTTCGTTTATTGAATGAAACAGGGTCGCTTGTTTTAAGTGTCTAATAGGACTGATTAATT
AAGAAAACAAATTTGTGAATCTCTGATATTCACTTCCAATTTTCATGTTGCAGCCGCGCATACCATCGGAACCACCGCATGCTTCTTCATGACGGACCGTCTGTACAACTTCATGCCCGG
CGGCGGATCGGACCCTTCGATCAACCCCGACTTCTTGCCGGAGCTAAAGTCAATGTGCCCGCAGAACGGCGACGTGAATGTGCGGATGCCAATCGATCACGGCAGCGAGCAGACATTCGA
CGACCAGATCCTCCGGAACATCAGGAGCGGATGGGCCATTTTGGAGTCGGACGCGAAGCTAAATGACGACCCGGTGACGCGGAGCGTGATCGAATCTTACGTGGGTCTCTTCAACCCGAT
CTTCGGGCCTTCCTTCGAAGCGGAATTCGTCGAATCAATGGTAAAAATGGGACAGATCGGTGTCAAGACGAGGGTCAAATGGAGAGATCAGGCGGGTTTGCAGATCTTTTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA