Entry information : PtaPrx17(PTA00032308)
Entry ID 807
Creation 2005-12-26 (Christophe Dunand)
Last sequence changes 2014-08-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-25 (Christophe Dunand)
Peroxidase information: PtaPrx17(PTA00032308)
Name PtaPrx17(PTA00032308)
Class Class III peroxidase     [Orthogroup: Prx019]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Embryos
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx17
start..stop
S start..stop
PabPrx160 625 0 1..335 1..335
PgPrx17 619 0 1..335 1..332
PsiPrx17 602 0 17..335 2..320
GbPrx17 525 0 10..335 17..338
Literature and cross-references PtaPrx17(PTA00032308)
Literature Cordonnier-Pratt,M.-M. et al., unpublished
EST ref. GenBank:   DR683943.1 [5' end]   DT631954.1 [5' end]
Cluster/Prediction ref. UniGene:   Pta.22359
Protein sequence: PtaPrx17(PTA00032308)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336 (219)
PWM (Da):   %s   36894.59 (23818.0)  
PI (pH):   %s   5.44 (5.09) Peptide Signal:   %s   cut: 24 range:24-242
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAVFASQMIK LLLLPLLFVF LRPSYLDLKA AEAELHRGFY KNSCPEAESL VTSVLEKAIQ RNPRNAASVM RLQFHDCFVN GCDGSVLLDD TPTMVGEKTA LSNINSLRAF DVIDEIKNAL  EEACPNTVSC ADIIIIAARD AVVLTGGPSW EVFLGRKDSL TASLEDSNDI MPSPRDNATA LIQLFKRFGL SVKDLVALSG SHTIGKARCF SIVHRLYNQS GTGQADPTME LTYKEYLQKL 
CPQGGDGNVT GNLDATPTVF DNQYFKDIVK GRGFLNSDEV LFSTGGETRE LVEFFSKNQA AFFSSFADSM INLGNLFASR TSHCGEIRRD CRKVNP* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (PTA00032308, incorrect prediction, exon is missing) and 2 ESTs (3' end is missing).
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTGTAT TTGCAAGCCA AATGATCAAA CTGCTGCTCT TGCCTCTGCT GTTTGTATTC TTGAGGCCCT CGTATCTGGA TTTGAAAGCA GCAGAAGCCG AACTGCACCG TGGGTTTTAC  AAAAACAGCT GTCCAGAGGC AGAGTCTCTG GTAACCTCTG TACTCGAGAA AGCCATTCAA AGAAACCCCA GAAATGCTGC TTCAGTCATG CGCCTCCAAT TTCATGATTG CTTTGTTAAT  GTATGTATAA ACAAACTTAT ACTTGATGGA CCTCTTGTCT TTCCCCTGTA TTCTCTGCAT TTTTAATGGG AAGTTATGTA TTTGTCATTA CTTCAAATGA GGATTATATC AATCTAAAGT  TAGTTGTCTG TTTTTTGTTG GTTTAAAAGA AATCAGATGA GTAATATAAG TTATATAAGT TGAGAATTTT GAGATTGTTA AGATTTCATT TAACTCAAGC ATCAAGTATT TGAAACTTAC  AAAAAAACAT CATTTTGTTA ATGTTATACA TCAAAAGACA AAAAAAACTA CTAGTACTTC AAAGCAAAAA TAAATTTGTG AATAATAACA AATATTAAGC TAAGTCTCTT AAATTTGTGA  ATAATAACAA ATATTAAGCT AAGTCTCTTA ACTGGTTACT AGTGCTGTAG ACTTAACTGG TTACTAGTGC TGTTCTCAAA AAAAACTAGT AAGTAATAAC AATTATGGGA CAAAATCTCT  AAGCATTGAC ACTAGCTGGT TATTACCGTC GTCCTGCAAA AAAATAAAAA TATCGAAATG TCAGTTGATC TCCTGACTAG AATAATCAAC ATGCCTTCTC TACCATCACT TTTTCTGCTA  GTCTGTGTCT CTCCTGTATG CTGCTTCAAT GAATTTAATG TTATCGTTAT TGACAGGGTT GTGATGGGTC GGTGCTGTTG GATGACACTC CTACGATGGT GGGAGAGAAA ACTGCTCTCT  CCAACATAAA TTCTCTGCGG GCCTTCGATG TAATTGATGA AATCAAGAAC GCATTGGAGG AGGCGTGCCC CAACACTGTT TCTTGCGCGG ACATCATCAT CATAGCAGCA AGGGATGCCG  TCGTTCTGGT TCGTACAGGC TGGACCCTCA TTCTTTTGCC TTAGTCTACC TGTTAAACGG TTTGGAATTT TTTTGGGCCC GTTTTATAGT AAAATTTGTT ATAAGAATTT GTTGGATTAT  AAGAATTCTC GATCTCCAAT TTACTGAATT AATATATTTT ACAACCAAAA ATGGTTTAGC CAAATTCAAC CCAAAAACTC GGCGTGAAAC TCTGAAAAAA AAAATAATAA TATAATAGTT  AAACAATGTC ATTCTTTCCT TTTAAGTCGG CTTCTTATTC TCTGTGTTGT TTTGCAGACT GGTGGACCTT CGTGGGAAGT GTTTTTGGGC AGAAAAGACA GCCTGACTGC CAGCCTTGAG  GATTCGAACG ATATAATGCC CAGTCCTCGA GACAACGCCA CAGCTCTCAT CCAACTATTC AAACGCTTCG GCCTCTCTGT CAAAGATTTG GTGGCTCTCT CGGGCTCTCA CACGATTGGG  AAAGCGCGGT GCTTTTCCAT AGTCCACAGG CTTTATAACC AGAGCGGTAC AGGCCAGGCC GACCCTACCA TGGAGCTGAC ATACAAGGAG TATCTTCAGA AACTCTGCCC TCAGGGCGGG  GACGGAAATG TGACGGGGAA TCTTGATGCC ACTCCAACCG TTTTCGACAA CCAGTACTTC AAAGACATAG TGAAGGGCAG AGGGTTCCTG AATTCTGACG AGGTTCTCTT CTCCACGGGC  GGAGAAACCA GAGAGCTGGT GGAGTTCTTC AGCAAAAACC AGGCGGCGTT CTTTTCCAGC TTCGCCGATT CCATGATAAA TCTCGGGAAT CTCTTCGCTT CACGCACCTC GCACTGCGGC 
GAGATTCGGA GGGACTGCCG AAAGGTGAAT CCATGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTGTAT TTGCAAGCCA AATGATCAAA CTGCTGCTCT TGCCTCTGCT GTTTGTATTC TTGAGGCCCT CGTATCTGGA TTTGAAAGCA GCAGAAGCCG AACTGCACCG TGGGTTTTAC  AAAAACAGCT GTCCAGAGGC AGAGTCTCTG GTAACCTCTG TACTCGAGAA AGCCATTCAA AGAAACCCCA GAAATGCTGC TTCAGTCATG CGCCTCCAAT TTCATGATTG CTTTGTTAAT  GGTTGTGATG GGTCGGTGCT GTTGGATGAC ACTCCTACGA TGGTGGGAGA GAAAACTGCT CTCTCCAACA TAAATTCTCT GCGGGCCTTC GATGTAATTG ATGAAATCAA GAACGCATTG  GAGGAGGCGT GCCCCAACAC TGTTTCTTGC GCGGACATCA TCATCATAGC AGCAAGGGAT GCCGTCGTTC TGACTGGTGG ACCTTCGTGG GAAGTGTTTT TGGGCAGAAA AGACAGCCTG  ACTGCCAGCC TTGAGGATTC GAACGATATA ATGCCCAGTC CTCGAGACAA CGCCACAGCT CTCATCCAAC TATTCAAACG CTTCGGCCTC TCTGTCAAAG ATTTGGTGGC TCTCTCGGGC  TCTCACACGA TTGGGAAAGC GCGGTGCTTT TCCATAGTCC ACAGGCTTTA TAACCAGAGC GGTACAGGCC AGGCCGACCC TACCATGGAG CTGACATACA AGGAGTATCT TCAGAAACTC  TGCCCTCAGG GCGGGGACGG AAATGTGACG GGGAATCTTG ATGCCACTCC AACCGTTTTC GACAACCAGT ACTTCAAAGA CATAGTGAAG GGCAGAGGGT TCCTGAATTC TGACGAGGTT  CTCTTCTCCA CGGGCGGAGA AACCAGAGAG CTGGTGGAGT TCTTCAGCAA AAACCAGGCG GCGTTCTTTT CCAGCTTCGC CGATTCCATG ATAAATCTCG GGAATCTCTT CGCTTCACGC 
ACCTCGCACT GCGGCGAGAT TCGGAGGGAC TGCCGAAAGG TGAATCCATG A 

Retrieve as FASTA