Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
307 (238) |
PWM (Da): |
33970.82 (25782.4) |
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PI (pH):
| 7.43 (8.67) |
Peptide Signal:
| cut: 0 range:Ymax-237 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GSGIEPPQKL QWHYYRNSCR DAERYVSTQV EFYWKLDRSL APKPIRMLYA DCFVTGCDAL ILSDRPYSEK TAPQNADLLG FPMAVMDKIK QVLEQHCPGV VCCADILNFA ARDAAHLAGG
LSYPVLAGRR DGMSSSVASV DLPLGAHPWG SVLAYFESRG LDVLDLVTLL GGHSMGKTSC SFIADRLYNF NKIGKPDPSM DSSFLAQMRE QGPPNSKNQL YLDPDSGSSY SFSKSFYSGV
LNHRVVLGID QQITANNDSS QIAEEFNASF EDFRKMFALS MSRMGNIKVL PGKQGEIRKN YRVVNGK*
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Retrieve as FASTA
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Remarks |
Pseudogene sequence from genomic (Short 5'end is missing; PS is missing due to undetermined nucleotides, frame shift around VALS). Incorrect prediction from Phytozome (PS and stop are missing). No EST. Containing motif 'YADC'. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGCAGTGGCA TTGAGCCGCC ACAGAAGCTG CAGTGGCATT ACTACCGGAA CTCGTGCCGC GACGCCGAGA GGTACGTTAG CACCCAGGTC GAGTTCTACT GGAAGCTGGA CAGGAGCCTC
GCGCCTAAGC CCATCCGAAT GCTCTATGCC GACTGCTTCG TCACGGTACA TTTCTTATCC TCTCTCGAAC GATCTATCAG TCCGCATCAC TTCAATATCA AGTTTTCATC GCCCTTCTAA
GCGCGTGATA TCCTTTCACC CAACGGTTTA ACCTCTTGAA CCAGGCTTTC TTACATACCA CTCTTGTGTA CATATATATA AAACAAAGCC TTGGACTCAG ATATGTTTGG TTATGCATAC
AAAACAGGGG TGCGATGCGT TGATTCTATC AGACCGGCCA TATTCAGAGA AAACAGCACC GCAAAATGCA GATCTTCTAG GGTTTCCTAT GGCGGTGATG GACAAGATCA AGCAAGTCCT
GGAACAACAT TGTCCAGGAG TCGTCTGTTG TGCTGACATA CTCAACTTTG CCGCTAGAGA TGCTGCTCAC TTGGTATGTA CCTGGTTTGC ACTTCTCTCT TTTGGCTTGA AAAGACGTTT
TCGCTGCATT GGTTATTGAC ATGCTGTTAG CTTGAGCTTG TAGGGTTAGA TGTGGAAAAT TAGCAGTGCT GATGTGATAA TAATGTTGAA ATAGGCGGGA GGGCTGTCGT ACCCTGTTCT
AGCGGGGAGG AGGGACGGGA TGTCGTCCTC CGTGGCGTCG GTGGACCTCC CATTGGGGGC CACCCTTGGG GATCGGTGCT CGCTTACTTC GAATCAAGAG GCTTGGATGT GCTGGATCTT
GTTACTCTAC TCGGTACGAT CGACCCTCAT GTGAAAACGT ATTTATTTGA CTTGTGACCT CATTAAATTA CCTTAGATCT TAGCAATTCC TTTTCGATTT TAATTTTTCG AAATCTCCAT
CTAATTGTTG GGATACATAG AATTTTATCA TATATAGGAT AGTCGAGAAT ATAATCCGAA CTGATCCTCC TAATGATACC TCCAAGTGCA CGAAGCAACA TGTTTATGTA CTATGTCATA
TCTCAAAATC AGAACCAATT CCTAACTTGC CAAAACAATG TAAACTTTGC AAGGAGGGCA TTCAATGGGC AAGACCAGCT GCAGCTTCAT CGCGGACCGG CTGTACAATT TCAACAAAAT
TGGCAAGCCA GACCCAAGCA TGGACTCATC CTTCTTGGCC CAGATGAGGG AGCAAGGCCC ACCGAACTCA AAGAATCAAC TGTACCTTGA CCCTGATTCA GGTTCCAGCT ACAGCTTCAG
CAAGTCATTC TACTCCGGGG TCCTGAACCA CCGTGTCGTC CTCGGCATCG ACCAGCAGAT CACCGCCAAC AATGACAGCT CCCAGATCGC TGAGGAGTTC AATGCCAGTT TTGAGGACTT
CCGGAAGATG TTCGCCCTAT CGATGAGCCG GATGGGGAAC ATCAAGGTCT TGCCGGGGAA GCAGGGGGAG ATTCGCAAGA ATTACCGAGT CGTGAACGGG AAGTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGCAGTGGCA TTGAGCCGCC ACAGAAGCTG CAGTGGCATT ACTACCGGAA CTCGTGCCGC GACGCCGAGA GGTACGTTAG CACCCAGGTC GAGTTCTACT GGAAGCTGGA CAGGAGCCTC
GCGCCTAAGC CCATCCGAAT GCTCTATGCC GACTGCTTCG TCACGGGGTG CGATGCGTTG ATTCTATCAG ACCGGCCATA TTCAGAGAAA ACAGCACCGC AAAATGCAGA TCTTCTAGGG
TTTCCTATGG CGGTGATGGA CAAGATCAAG CAAGTCCTGG AACAACATTG TCCAGGAGTC GTCTGTTGTG CTGACATACT CAACTTTGCC GCTAGAGATG CTGCTCACTT GGCGGGAGGG
CTGTCGTACC CTGTTCTAGC GGGGAGGAGG GACGGGATGT CGTCCTCCGT GGCGTCGGTG GACCTCCCAT TGGGGGCCCA CCCTTGGGGA TCGGTGCTCG CTTACTTCGA ATCAAGAGGC
TTGGATGTGC TGGATCTTGT TACTCTACTC GGAGGGCATT CAATGGGCAA GACCAGCTGC AGCTTCATCG CGGACCGGCT GTACAATTTC AACAAAATTG GCAAGCCAGA CCCAAGCATG
GACTCATCCT TCTTGGCCCA GATGAGGGAG CAAGGCCCAC CGAACTCAAA GAATCAACTG TACCTTGACC CTGATTCAGG TTCCAGCTAC AGCTTCAGCA AGTCATTCTA CTCCGGGGTC
CTGAACCACC GTGTCGTCCT CGGCATCGAC CAGCAGATCA CCGCCAACAA TGACAGCTCC CAGATCGCTG AGGAGTTCAA TGCCAGTTTT GAGGACTTCC GGAAGATGTT CGCCCTATCG
ATGAGCCGGA TGGGGAACAT CAAGGTCTTG CCGGGGAAGC AGGGGGAGAT TCGCAAGAAT TACCGAGTCG TGAACGGGAA GTAA
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Retrieve as FASTA
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