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Entry information : SbPrx113 (Sobic.009G033400.1 [2.1] / SB09G002820 [1.4])
Entry ID 810
Creation 2005-12-16 (Christophe Dunand)
Last sequence changes 2011-01-18 (Toky Ramarohetra (Scipio))
Sequence status complete
Reviewer Messaoudi
Last annotation changes 2014-08-04 (Messaoudi)
Peroxidase information: SbPrx113 (Sobic.009G033400.1 [2.1] / SB09G002820 [1.4])
Name (synonym) SbPrx113 (Sobic.009G033400.1 [2.1] / SB09G002820 [1.4])
Class Class III peroxidase    [Orthogroup: Prx156]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum bicolor    [TaxId: 4558 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SbPrx113
start..stop		 S start..stop
ZmPrx77 577 0 1..338 1..336
SiPrx93 563 0 1..338 1..334
TaPrx225-1B 511 0 18..338 18..338
TaPrx225-1D 509 0 33..338 35..340
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3059203..3059451 247 N° 2 3058309..3059076 766  
complement(join(3058309..3059076,3059203..3059451))


exon

Literature and cross-references SbPrx113 (Sobic.009G033400.1 [2.1] / SB09G002820 [1.4])
Literature Cordonnier-Pratt,M.-M. et al., unpublished
DNA ref. Phytozome 12:   chromosome_9 (3059451..3058309)
Protein sequence: SbPrx113 (Sobic.009G033400.1 [2.1] / SB09G002820 [1.4])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   338
PWM (Da):   %s   35924.4  
PI (pH):   %s   8.97
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSAGTRADEVVVQVRQLVVVVAVAVMATSCFSSSEAQLQVGYYNATCPAAESLIETIVHAAVRKDAGNGPGLIRLFFHDCFVRGCDASVLLDDPTGTPGNRTVEKTSQPNFPSLRGFSVI
NRAKRVVERRCPGTVSCADIVAFAARDAARIMGGIRFAMPSGRLDGRVSNASEATANLPPASFNLTQLLARFASKNLTADDLVTLSGAHSIGRSHCSSFANTRLYPQLDATLNVTLAARL
RAKCPAAPGGKDRVVDLDFRTPLQLDNQYYSNVATHEVVFGSDQALGDRNDTAALVALYAANRKIWSQKFAAAMVKMGSIEVLTGPPGEVRLKCNKVN*

Retrieve as FASTA  
Remarks Complete sequence from 15 EST and Genomic (chromo 9, intron 1).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGCGCCGGCACCAGAGCTGATGAGGTCGTCGTCCAAGTACGGCAGCTCGTCGTCGTAGTGGCTGTCGCCGTGATGGCGACATCATGCTTCTCCTCCTCGGAGGCGCAGCTCCAGGTC
GGGTACTACAACGCCACCTGCCCCGCCGCCGAGAGCCTCATCGAGACCATCGTCCACGCCGCCGTCCGTAAGGACGCCGGCAACGGCCCCGGCCTCATCCGCCTCTTCTTCCACGACTGC
TTCGTCAGGGTACGTTTACGTACGCGCACACACACAATGCCGCCGCCGCCGCCGCCGCCGCCGTGCTGCTCCTGCCACTGCCACTGCCATTGCCGGAACGGCAATACACTAAACTAAACA
ACATCTCCATTGCAGGGGGATGCGACGCGTCGGTGCTGCTAGACGACCCGACGGGCACGCCAGGGAACAGGACGGTGGAGAAGACGTCGCAACCAAACTTCCCCAGCCTCCGTGGGTTCA
GCGTCATCAACCGGGCGAAACGCGTGGTGGAGCGGCGGTGCCCGGGGACAGTCTCGTGCGCCGACATCGTCGCCTTCGCGGCGCGCGACGCCGCCCGGATCATGGGCGGGATCCGCTTCG
CCATGCCTTCCGGCCGCCTCGACGGGCGCGTCTCCAACGCGTCCGAGGCGACGGCCAACCTTCCGCCGGCGTCGTTCAACCTGACGCAGCTCCTGGCCCGGTTCGCGTCCAAGAACCTCA
CCGCCGACGACCTCGTCACGCTGTCGGGCGCCCACTCCATCGGCCGCTCCCACTGCTCCTCCTTCGCCAACACGCGGCTGTACCCGCAGCTGGACGCCACGCTGAACGTCACGCTGGCGG
CGAGGCTCAGGGCCAAGTGCCCCGCCGCTCCCGGCGGGAAAGACCGCGTCGTCGACCTCGATTTCAGGACGCCGCTGCAGCTGGACAACCAGTACTACAGCAACGTGGCGACGCATGAGG
TGGTGTTCGGGTCGGACCAGGCGCTCGGCGACCGGAACGACACGGCGGCGCTCGTCGCGCTGTATGCTGCCAACCGTAAGATATGGTCGCAGAAGTTCGCGGCGGCCATGGTGAAGATGG
GTAGCATCGAGGTGCTCACCGGCCCCCCCGGCGAGGTCAGGCTCAAGTGCAACAAGGTCAACTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGCGCCGGCACCAGAGCTGATGAGGTCGTCGTCCAAGTACGGCAGCTCGTCGTCGTAGTGGCTGTCGCCGTGATGGCGACATCATGCTTCTCCTCCTCGGAGGCGCAGCTCCAGGTC
GGGTACTACAACGCCACCTGCCCCGCCGCCGAGAGCCTCATCGAGACCATCGTCCACGCCGCCGTCCGTAAGGACGCCGGCAACGGCCCCGGCCTCATCCGCCTCTTCTTCCACGACTGC
TTCGTCAGGGGATGCGACGCGTCGGTGCTGCTAGACGACCCGACGGGCACGCCAGGGAACAGGACGGTGGAGAAGACGTCGCAACCAAACTTCCCCAGCCTCCGTGGGTTCAGCGTCATC
AACCGGGCGAAACGCGTGGTGGAGCGGCGGTGCCCGGGGACAGTCTCGTGCGCCGACATCGTCGCCTTCGCGGCGCGCGACGCCGCCCGGATCATGGGCGGGATCCGCTTCGCCATGCCT
TCCGGCCGCCTCGACGGGCGCGTCTCCAACGCGTCCGAGGCGACGGCCAACCTTCCGCCGGCGTCGTTCAACCTGACGCAGCTCCTGGCCCGGTTCGCGTCCAAGAACCTCACCGCCGAC
GACCTCGTCACGCTGTCGGGCGCCCACTCCATCGGCCGCTCCCACTGCTCCTCCTTCGCCAACACGCGGCTGTACCCGCAGCTGGACGCCACGCTGAACGTCACGCTGGCGGCGAGGCTC
AGGGCCAAGTGCCCCGCCGCTCCCGGCGGGAAAGACCGCGTCGTCGACCTCGATTTCAGGACGCCGCTGCAGCTGGACAACCAGTACTACAGCAACGTGGCGACGCATGAGGTGGTGTTC
GGGTCGGACCAGGCGCTCGGCGACCGGAACGACACGGCGGCGCTCGTCGCGCTGTATGCTGCCAACCGTAAGATATGGTCGCAGAAGTTCGCGGCGGCCATGGTGAAGATGGGTAGCATC
GAGGTGCTCACCGGCCCCCCCGGCGAGGTCAGGCTCAAGTGCAACAAGGTCAACTGA

Retrieve as FASTA