Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
250 |
PWM (Da): |
27241.81 |
|
PI (pH):
| 9.34 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MHPLIDSIAR KPSEKFTRPN FSVRRYDIID EAKKIFKATC LSTVPYANMV MLATQDSVLL VGLLAGVPSY NVPMRRRDGL VSYPNEVNLP RATFSISEAT QAFMTKGFFT FTVTGTLLDA
HSVGAAHCSL FQDRLSNFQG TxGALDPTMD *SLVTKLKGI CRNSTSNDPT AFLDQSTSFM ADNxVCKQIM QKKGVLRID* ELTIPAPASF LGSCQMRDES FACAMVRLGN IQVPTGNAKE
IRRNCRIFNK PK
|
Retrieve as FASTA
|
|
Remarks |
Pseudogene from genomic. Incorrect prediction from Phytozome (Exon is missing, frame shift and stop codons in frame). No EST.
join(32132586..32132769,32133541..32134109). |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCATCCCC TCATCGACTC CATTGCCAGG AAGCCATCGG AGAAATTCAC CAGGCCAAAC TTCTCTGTAC GACGATACGA CATCATCGAC GAAGCGAAGA AGATTTTCAA AGCTACGTGC
CTTTCGACTG TCCCTTATGC TAACATGGTC ATGCTCGCAA CTCAAGACTC TGTATTGCTC GTCGGTAAAC CTATCAAATT GGGTTTAAGA CCCATATATG ATCATGTTAA AAATAAATAG
GTCATGTATG GGTCATTTCA ATTTTGTAGA GCCTTCCTTA AATGTGTTTA AAATTTTAAA GGTTAAAATA AATGGATCTA AATGGGTTGA GTTTATGACC AATTTCCGAC CAAAGGCTCA
CATACACACT CTCTCCTCTT TGGCCTTACA AAATTATTTT TTAGAAAAAT CAGATTATAA TTATAATTAT TTTTCTTTTT CTTATTTAGT ATTTCTTTTT TTTCTTTCTT CTTCCTTCTT
CCATCTTCCT TCGATTATAT TGACTGACCA GGTGATGGAC AAGTTACCGG ACTCGAGAAA GGCCTCAGGC AATTGGCTGA AGAAGAAGGA ATTTTTTTTC TTTTTTAAAA TAAAAAATAA
TTTTTAAAAA ATAATAAATT AATAAAATTT ATTTACAAAC ATATATTTTT TTTATTTTCT TGGAAAACAT TTTCCAAGAA ACAAATGTAA CCTCAATTAT TTAAAAAAAT TATAAAAAAT
GTCCATAAAT TTGAATTGCA CGAAAGTATT TTAGTAGTAC CTTTTTTTCG AAAAAAAAAA TCATAAGAAA CAAGATCTCC TAAATTTGGT TAAACTAGTT AGGTTAGGAA TGGGTCGGGT
ATGGGTTAAG AAATTTGCAT TATAATAAAT GGGTCATAAA GGGGTTAAAT GAGTCAATAT GAGTCGGACC ATTTATGATC CAATCCAAAC CCGACTTAAG TTACCGATTT AACAGGTTTA
CTTGCCGGAG TCCCTAGCTA TAATGTCCCT ATGAGAAGGC GAGACGGTCT GGTTTCATAC CCGAATGAAG TGAATTTGCC GAGAGCCACA TTCTCGATAT CTGAGGCGAC ACAAGCTTTC
ATGACAAAAG GGTTTTTTAC GTTCACCGTA ACGGGGACTC TTTTGGACGC CCACTCCGTT GGAGCCGCTC ACTGCAGCTT GTTCCAAGAC CGCCTTTCGA ATTTCCAAGG CACCTnnGGA
GCTCTGGATC CAACGATGGA CTAGAGCTTG GTCACGAAGC TGAAGGGCAT TTGCAGGAAC TCAACAAGCA ACGACCCTAC CGCGTTTTTG GACCAGAGCA CGTCGTTCAT GGCGGATAAC
TCnGTCTGCA AACAAATTAT GCAAAAGAAA GGGGTGTTGC GAATCGACTA GGAGCTCACA ATTCCTGCGC CAGCATCGTT TCTCGGTTCA TGTCAGATGC GAGATGAGAG CTTTGCGTGT
GCGATGGTGA GGCTCGGAAA TATTCAAGTT CCCACTGGGA ATGCTAAAGA AATCAGGAGG AACTGCAGGA TTTTCAATAA ACCCAAG
|
Retrieve as FASTA
|
|