Entry information : EgrPrx[P]49 ( Eucgr.A02148 / Egrandis_v1_0.027617m)
Entry ID 8103
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2012-02-28 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-13 (Christophe Dunand)
Peroxidase information: EgrPrx[P]49 ( Eucgr.A02148 / Egrandis_v1_0.027617m)
Name (synonym) EgrPrx[P]49 ( Eucgr.A02148 / Egrandis_v1_0.027617m)
Class Class III peroxidase     [Orthogroup: Prx025]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]49
start..stop
S start..stop
EguPrx[P]49 483 6e-176 1..252 1..252
EglPrx[P]49 366 4e-130 15..252 1..238
EgrPrx48 308 1e-105 4..252 75..322
EglPrx48 306 3e-105 4..252 75..322
Literature and cross-references EgrPrx[P]49 ( Eucgr.A02148 / Egrandis_v1_0.027617m)
DNA ref. Phytozome 12:   scaffold_1 (32132586..32134109)
Protein sequence: EgrPrx[P]49 ( Eucgr.A02148 / Egrandis_v1_0.027617m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250
PWM (Da):   %s   27241.81  
PI (pH):   %s   9.34
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MHPLIDSIAR KPSEKFTRPN FSVRRYDIID EAKKIFKATC LSTVPYANMV MLATQDSVLL VGLLAGVPSY NVPMRRRDGL VSYPNEVNLP RATFSISEAT QAFMTKGFFT FTVTGTLLDA  HSVGAAHCSL FQDRLSNFQG TxGALDPTMD *SLVTKLKGI CRNSTSNDPT AFLDQSTSFM ADNxVCKQIM QKKGVLRID* ELTIPAPASF LGSCQMRDES FACAMVRLGN IQVPTGNAKE 
IRRNCRIFNK PK 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from Phytozome (Exon is missing, frame shift and stop codons in frame). No EST.
join(32132586..32132769,32133541..32134109).
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCATCCCC TCATCGACTC CATTGCCAGG AAGCCATCGG AGAAATTCAC CAGGCCAAAC TTCTCTGTAC GACGATACGA CATCATCGAC GAAGCGAAGA AGATTTTCAA AGCTACGTGC  CTTTCGACTG TCCCTTATGC TAACATGGTC ATGCTCGCAA CTCAAGACTC TGTATTGCTC GTCGGTAAAC CTATCAAATT GGGTTTAAGA CCCATATATG ATCATGTTAA AAATAAATAG  GTCATGTATG GGTCATTTCA ATTTTGTAGA GCCTTCCTTA AATGTGTTTA AAATTTTAAA GGTTAAAATA AATGGATCTA AATGGGTTGA GTTTATGACC AATTTCCGAC CAAAGGCTCA  CATACACACT CTCTCCTCTT TGGCCTTACA AAATTATTTT TTAGAAAAAT CAGATTATAA TTATAATTAT TTTTCTTTTT CTTATTTAGT ATTTCTTTTT TTTCTTTCTT CTTCCTTCTT  CCATCTTCCT TCGATTATAT TGACTGACCA GGTGATGGAC AAGTTACCGG ACTCGAGAAA GGCCTCAGGC AATTGGCTGA AGAAGAAGGA ATTTTTTTTC TTTTTTAAAA TAAAAAATAA  TTTTTAAAAA ATAATAAATT AATAAAATTT ATTTACAAAC ATATATTTTT TTTATTTTCT TGGAAAACAT TTTCCAAGAA ACAAATGTAA CCTCAATTAT TTAAAAAAAT TATAAAAAAT  GTCCATAAAT TTGAATTGCA CGAAAGTATT TTAGTAGTAC CTTTTTTTCG AAAAAAAAAA TCATAAGAAA CAAGATCTCC TAAATTTGGT TAAACTAGTT AGGTTAGGAA TGGGTCGGGT  ATGGGTTAAG AAATTTGCAT TATAATAAAT GGGTCATAAA GGGGTTAAAT GAGTCAATAT GAGTCGGACC ATTTATGATC CAATCCAAAC CCGACTTAAG TTACCGATTT AACAGGTTTA  CTTGCCGGAG TCCCTAGCTA TAATGTCCCT ATGAGAAGGC GAGACGGTCT GGTTTCATAC CCGAATGAAG TGAATTTGCC GAGAGCCACA TTCTCGATAT CTGAGGCGAC ACAAGCTTTC  ATGACAAAAG GGTTTTTTAC GTTCACCGTA ACGGGGACTC TTTTGGACGC CCACTCCGTT GGAGCCGCTC ACTGCAGCTT GTTCCAAGAC CGCCTTTCGA ATTTCCAAGG CACCTnnGGA  GCTCTGGATC CAACGATGGA CTAGAGCTTG GTCACGAAGC TGAAGGGCAT TTGCAGGAAC TCAACAAGCA ACGACCCTAC CGCGTTTTTG GACCAGAGCA CGTCGTTCAT GGCGGATAAC  TCnGTCTGCA AACAAATTAT GCAAAAGAAA GGGGTGTTGC GAATCGACTA GGAGCTCACA ATTCCTGCGC CAGCATCGTT TCTCGGTTCA TGTCAGATGC GAGATGAGAG CTTTGCGTGT 
GCGATGGTGA GGCTCGGAAA TATTCAAGTT CCCACTGGGA ATGCTAAAGA AATCAGGAGG AACTGCAGGA TTTTCAATAA ACCCAAG 

Retrieve as FASTA