Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
324 (305) |
| PWM (Da): |
36020.05 (33952.9) |
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| PI (pH): |
6.5 (6.12) |
Peptide Signal: |
cut: 20 range:20-324 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTPSRLWQLL LSALALVSSC QVQHNANAAE TMDPPQKLQW LYYQNSCPDA EKYVRDQVEF YWKQDRTLAL KLIRLLYSDC FITGCNASIL LDAPIQNAAL LGLPMEMIDK VKEVLEQHFP
GDFSCTDIIN LAAKDAVVLV GGTSYPIPTG RRDGNSSSAK SVDLLPL*AI PWKAVPGYFK SKGLNVLFLT TLRGTNCRxC SFIPDRLYDF NKTGEPDPSM DPTFLSQLRE QCPPNSTNLA
YLNPDLGSSY SFGNSFYSRV RHHQAVLGIN QQIASNFDSS LIAWEYDVRF GDFQKMFGMS TIRMGNIKLL PEDQG*IRKN C*VVDGK
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Retrieve as FASTA
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| Remarks |
Pseudogene from genomic. Incorrect prediction from Phytozome (some stops in frame, frame shift exon 2). No EST. Containing motif 'YSDC'.
join(3796441..3796698,3796897..3797025,3797176..3797244,3799275..3799370,3799676..3800093). |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACACCAT CAAGGTTGTG GCAGTTGTTG CTATCGGCGC TCGCGTTGGT GAGCTCATGC CAGGTGCAGC ACAATGCCAA CGCGGCAGAG ACAATGGATC CGCCGCAGAA GCTGCAATGG
CTTTACTACC AGAACTCATG CCCTGACGCT GAGAAGTACG TGAGGGACCA GGTCGAGTTC TACTGGAAGC AGGACAGGAC CCTTGCTCTC AAGCTCATCC GACTACTCTA CTCCGACTGC
TTCATCACCT TATGTATCGT CTGTTTTTTT CCCCCTCTCT TGGACGATCT TGAAATCCGT ATCGCTTCAA TATCAAGTTT CCATCGCCTT TCTATGCTCG TGATATCATT TCGCCTAAGG
GTTTAAACCT CTCGAACAGG GCTTTCTAAC GTACCACTCT TTTGTGTATA AAACTGGGGT GCAATGCGTC AATTCTATTG GACGCGCCAG ATTCAGAATG CAGCGCTTCT AGGGCTTCCT
ATGGAGATGA TTGACAAGGT CAAGGAAGTC CTGGAACAGC ATTTTCCTGG GGACTTCTCT TGCACCGACA TAATCAACCT CGCTGCTAAA GATGCTGTTG TCTTGGTATG CATCATGGTT
CGCAGTTTTT CCCTTTTGGG CGTGAAAAAA GATCGTTTAG GCTGCTCCAC TAATAATTGA CATGCTATTA GCTTGAGTTC TAGAGCGTTC GATATGGAGA AAAATTAGAA TTATGCGATA
ATAATGCAGT AACAGGTGGG AGGGACGTCG TACCCCATTC CAACGGGGAG GAGGGACGGG AATTCATCCT CCGCGAAGTC GGTGGACCTC TTCTTTAGGC CCTATTTGGA AATGGGCCAA
ATAGTAAAAA AATTTATTCT TTTGTTTCCG GGAGTAGTTT TGGAATAAAA TCATGTTTGG TAAAAATTTT GTTTCTGGGA ACAAATTTCT ATTTTTTTTT CCCAAAAGTA GATTTGAAAC
AGAATCAAGA ATAAAATAAA ATAAAATAAA TCGATTCTTG TTCTAGGAAC AATTCTATAA TTAAGCCCAT ATTTTCTCTT TTTATTTTCT TTTTCTTGTT CTTCTTCCAT TTTCTTCTTC
TTCATCTACT GCCATTGCTG CCGCCGTCGC CACTATTGTT CGGCGCCTAC CATCGCCGAT TGCTGACAAC TAGTCCGATG AGCTCAGCCA TCGGCGAGGA GGGCGAGGCT TACCCAGCCC
CGACTACGTT TGACCTTGCC GGGCCACCGC AAGGTCGGCC TCGCCTAGGG TGGTGGGCTT CACAGTGCTG AGATGGGTTC TGGAAGGTGA TTATGGGGAA GCTGACCCCC ATTAGGGTTC
CGAGGGTGGT GCTCCAATCA TGGAAGAAAG AACCTGTGGG CTTCCCCTGC CATTCGCACG AAGCATAAGT AGAGCATAAC TACAGCACGA TGACGATGGC TTGCTTCTCT ATCTACTCTC
ACCTCCCCTC ACCGTGTCCT CCTCCTCCAA GCAAGGCCGA CCTCGTGGGG ACCCAGCAAA GTCGAGCCCC ACGGGCGACT AGGCGAGCTC GTCCTCACCA GATTTGGGCA AGGTCACTCG
CCTAGCCATG GCTCGGCCGG GCCTCACCCA CTTGCAGACG AGGCTCGGCC GACGAGTGCC GGTGACGCTT CGGTGAGGTC GTCGGTCCTC GTCTGGCTGT TCGTCGGTCA TCCTAAGGTC
GGCAATCGGC CACTTGAAGA AGAAGAATAG GAGAAAGAAA GGGGAAAAAA AAGAAAAAAG TAATAAAATT ATTTAAAAAT TAAAATAAAA TGATTTGAAG TAGAAATTTT GAGCACGGTA
CGAAACGCAA TTCTATTATG TGAATTGAAA TTTTTTTATA GTTACCAAAC AGCTTAAAAT ACTTAGAAAT TGTTCCCGGG AACAGAAACG TTACTAAACA CACTCTTAGA GTGGGTCTTA
GACCCATATA TGACCCATTT AAATCATAAA TGGACCATAT ATGGATCACT TATTTTTTGA AGAAACAAGT TAAATGGATT TAAAAATTGA AGGCTTAAGA TAAATGGGTT TTAAATAGGT
CTTAAATGGG TTGGACTTAG AACTCATTTT CAACCAAAAC CTCACAATCT CCATCTTTCC TCTTTAACTT TACGAAAATA TTTTTAAATA AAGATCGAAA TTATAATTAT TTTTTATACT
TTAATTTTCT TTTTCTTTTT TTAATTTCCT TTTTTCTTTC CTTCTTCCTC CTTCTTTAGC CGGTGGCTGG CATGGTGACC GGCCAAGTGA GGCTCGAGCT CAATGGCCTT AGGCATGGCT
CAAGCTTTGC CAGATCCAGT GATGGGTGAG CTCTAACCTC GCCAAATCGG CGAGCCCTCG AGCTCGTCGA TGTCAAGCGA GGCTTATCGA GCGAACCGGA TGAGCTTTTA AGGCTTGCCT
GTGGCTGGTT GCCAGCTATC GTCGTGGTTG ACGATCAGCC ATAGAAGAAG AAAAACAAAA AAGAAAAAAG AAAAGAGAAA AGGAAAATTA GAAATTATAT TCTTCAAAAA TAAAAAATAA
TTCTTTACCA AAAAAAATAA AAATAAAAAA TAAAAAATAA TTAAAAATTC GATTTTCTAA AATAATAAAT TCTTAAAAAA TATAAAAATT GTCCATTAAA TTTATAATTG ATAAAATTAT
TTTAGCAATA CCATTTTTTA AAAAATAATG AAAAATAAGT TTTCTTAAGT TTAGTTAAAT GGGTCGGATA TGGGTTGAAT ATGAGTTGGG TCAGGTATGG GTAAAAGAAT TTGCACTACA
ATAAATCGGT CATAAACAGG TTAAATGGGT CGAATTGGGT CGGACCATTT ATGACCCGAC CCACCCGTTT AACGGATCTA CTCCCATTGT AGGCCATCCC ATGGAAAGCG GTGCCCGGTT
ACTTCAAATC AAAGGGTTTG AATGTGCTGT TCCTCACTAC TCTACGCGGT ATCATCTGAC CCTCACAAAT TTGACCGGGA CTTCATTATA TCACCTCAGA TCTTAACCAA TCCAAGCAAA
TTGTTTAGTT TAGTGGATCG CGACGTCTTT TTTCGCTTTT AAGTTTTGTA AGTCGCTGCC TAATTGTCAC GATACAAAGA ATTTTATCAT AAATAGAATT GTCGAGGATA TAATCTGAGC
CTCAATCCTC ACAATGATCT CCTCCCAGTG CACAAAATGG CAATGCTCAC GTATTATGTC AATCTCAGAA TCATAGCCAA AATCCTAACT TGCCAAAACA ATTTAAATTT TTCCCGGGGG
GCATTCACTG GGCAAGACCA ATTGCAGGCn nTGTAGCTTC ATCCCGGACA GGTTGTACGA TTTCAACAAA ACTGGCGAGC CAGACCCAAG CATGGACCCA ACCTTCTTGT CCCAATTGAG
GGAGCAATGC CCTCCGAACT CAACGAATCT AGCGTACCTC AACCCTGACT TAGGCTCGAG CTACAGCTTC GGCAATTCCT TCTACTCAAG GGTACGGCAC CACCAGGCGG TCCTCGGCAT
CAACCAGCAG ATCGCTAGCA ACTTCGACAG CTCCCTGATC GCTTGGGAGT ATGATGTCAG ATTCGGGGAC TTCCAGAAGA TGTTCGGCAT GTCAACAATC CGGATGGGGA ACATCAAGCT
CCTACCGGAG GATCAGGGGT AGATTCGCAA GAATTGCTGA GTCGTGGACG GGAAA
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Retrieve as FASTA
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