Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
310 |
PWM (Da): |
33215.56 |
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PI (pH):
| 8.56 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MLNSGSATLQ VGFYRSTCPA AESVVRKAVN KAVARNPGIG AGLIRMHFHD CFVRGCDASI LLDSTPGNPS EKEHPANNPS LRGYEVIDEA KAELEYLCPQ TVSCADILAF AARDSTYKLG
SINYAVPAGQ RDxLVSRRDE PSQNLPPPSL DAQQLEANFA RKGLSLDEMV TLSGAHSIGV SHCSSFSNRL YSFNATHKRD PSMEPKLASE LKAKCPNNGG TSDPTVPLDF VTANGLDNKY
YTNLKKHRGV LTSDQTLFNS PSTAHIVRRN ANHGGAWANK FAAAMVKMGS IDVLTGSQGE IRRNCRVVNY
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic. Incorrect prediction from Phytozome (Short PS in frame which has been removed). Also found in scaffold_900 (Egrandis_v1_0.047392m, Egrandis_v1_0.052338m). join(21077223..21077384,21077527..21078293)
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCTGAACT CAGGTTCAGC AACTCTCCAA GTCGGATTCT ACCGCTCCAC TTGCCCGGCT GCGGAGTCTG TCGTTCGAAA AGCCGTGAAC AAGGCGGTGG CCAGAAATCC CGGCATTGGT
GCTGGGCTTA TTAGAATGCA CTTCCATGAT TGCTTTGTTC GGGTATGCAA ACACTTCTTA CAACATTTCT GAAGTAGCAG TAACAATCTC GATTTCAATA AGCAGTAACT TAATAATCGA
CGTTCCTTAT GCAGATGCAT TTCAGCAATT CTGATGATTT TCGTATTTTT TGAAACAATA ATAGGGTTGC GATGCATCAA TTTTGCTCGA TTCAACACCG GGCAACCCAT CAGAGAAGGA
GCATCCCGCG AACAACCCAA GCTTACGAGG CTACGAAGTC ATCGACGAGG CAAAGGCCGA GCTAGAGTAT CTATGCCCCC AGACGGTCTC CTGTGCCGAT ATTCTGGCAT TTGCAGCCCG
CGACAGCACC TACAAGCTGG GCAGCATTAA CTACGCAGTC CCGGCCGGTC AGCGCGATGG nCTAGTCTCC CGCAGAGACG AGCCGTCCCA GAATCTTCCC CCTCCTTCCT TGGATGCTCA
ACAGTTAGAA GCTAATTTTG CTAGGAAAGG TCTCTCCCTA GACGAAATGG TGACACTATC CGGTGCGCAT TCGATCGGAG TCTCGCACTG TTCCTCCTTC TCGAACCGCT TGTACTCCTT
CAACGCCACT CACAAGCGAG ACCCTTCAAT GGAACCCAAG TTGGCCAGTG AACTGAAAGC GAAGTGTCCG AACAATGGTG GTACCAGCGA CCCGACGGTC CCATTGGACT TTGTCACTGC
CAACGGGCTC GACAACAAGT ACTACACTAA TTTAAAGAAA CACCGAGGCG TACTGACTTC AGATCAAACG CTTTTTAATA GCCCTTCGAC GGCACATATT GTGAGGAGGA ACGCTAATCA
TGGCGGAGCA TGGGCTAACA AATTTGCAGC TGCAATGGTG AAGATGGGAT CAATCGATGT TCTCACCGGG AGCCAGGGCG AGATTAGGAG GAATTGCAGA GTTGTGAACT ATTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCTGAACT CAGGTTCAGC AACTCTCCAA GTCGGATTCT ACCGCTCCAC TTGCCCGGCT GCGGAGTCTG TCGTTCGAAA AGCCGTGAAC AAGGCGGTGG CCAGAAATCC CGGCATTGGT
GCTGGGCTTA TTAGAATGCA CTTCCATGAT TGCTTTGTTC GGGGTTGCGA TGCATCAATT TTGCTCGATT CAACACCGGG CAACCCATCA GAGAAGGAGC ATCCCGCGAA CAACCCAAGC
TTACGAGGCT ACGAAGTCAT CGACGAGGCA AAGGCCGAGC TAGAGTATCT ATGCCCCCAG ACGGTCTCCT GTGCCGATAT TCTGGCATTT GCAGCCCGCG ACAGCACCTA CAAGCTGGGC
AGCATTAACT ACGCAGTCCC GGCCGGTCAG CGCGATGGCC TAGTCTCCCG CAGAGACGAG CCGTCCCAGA ATCTTCCCCC TCCTTCCTTG GATGCTCAAC AGTTAGAAGC TAATTTTGCT
AGGAAAGGTC TCTCCCTAGA CGAAATGGTG ACACTATCCG GTGCGCATTC GATCGGAGTC TCGCACTGTT CCTCCTTCTC GAACCGCTTG TACTCCTTCA ACGCCACTCA CAAGCGAGAC
CCTTCAATGG AACCCAAGTT GGCCAGTGAA CTGAAAGCGA AGTGTCCGAA CAATGGTGGT ACCAGCGACC CGACGGTCCC ATTGGACTTT GTCACTGCCA ACGGGCTCGA CAACAAGTAC
TACACTAATT TAAAGAAACA CCGAGGCGTA CTGACTTCAG ATCAAACGCT TTTTAATAGC CCTTCGACGG CACATATTGT GAGGAGGAAC GCTAATCATG GCGGAGCATG GGCTAACAAA
TTTGCAGCTG CAATGGTGAA GATGGGATCA ATCGATGTTC TCACCGGGAG CCAGGGCGAG ATTAGGAGGA ATTGCAGAGT TGTGAACTAT TAG
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Retrieve as FASTA
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