Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
315 |
PWM (Da): |
33850.83 |
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PI (pH):
| 8.21 |
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Sequence 357
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MFSFITFLNSGSATLQVGFYRSTCPSAESVVRKAVNKAVAKNPGIGAGLIRMHFHDCFVRGCDASILLDSTPGNPSEKEHPANNPSLRGFEVIDEAKAELESLCPQKVSCADILAFAARDSAYKLGSINYAVPAGRRDGLVSLKDEPSQNLPPFFFNAQQLEANFASKGLSLDEMVTLSGAHSIGVSHCSSFSDRLYSFNATHTQDPSMDTKLASQLKSKCPNNGGASDPTVPLDLVTPNRLDNKYYTNLKNHRGLLTSDQTLFNSPSTANIVRSNANNGGAWANKFAAAMVKMGSIDVLTGSEGEIRRKCRVVN* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (Egrandis_v1_0.046460m, scaffold_10, 21110055 - 21111288). Incorrect prediction from phytozome (short 3' end and stop codon missing which has been completed). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTTCTCGTTCATCACCTTTCTGAACTCGGGTTCAGCAACTCTCCAAGTGGGATTCTACCGCTCCACTTGTCCGTCTGCGGAGTCCGTCGTCCGGAAAGCAGTGAACAAAGCGGTGGCC AAGAACCCTGGCATCGGTGCTGGGCTTATTAGAATGCACTTCCATGATTGCTTTGTTCGGGTATGCAAGAACTTCTTTACACATTTCAGAAGTAGTGGTTATAATCTCGTTTGCGGAAAA ATTGTAATGCAAGGAAAACCTTTTTTGTTTAAGCAAAAAGCGTATGCCTATCTTTTGTTAGTACAAAAGATATCGATGAGATGGGAGTGTGGGGAGTACATTTCACATTCTATCACTGGT CCAGGACTTTTTAAGTTTTGTCTAACCGACCGGTCACAAAATAATCTATATTTCTTATGCAGATGCACTTCAGCTATCCTGATAATTAATTGGCTGATCTTTGATCCAATAATAGGGTTG CGATGCTTCAATCTTGCTGGATTCGACCCCAGGCAACCCATCAGAGAAGGAACATCCCGCAAACAACCCGAGCTTGCGAGGTTTTGAAGTCATCGATGAGGCGAAGGCTGAGCTAGAGTC TCTATGCCCGCAGAAGGTCTCATGCGCTGACATTCTTGCATTCGCAGCACGCGACAGTGCCTACAAACTCGGCAGCATCAACTACGCAGTCCCAGCGGGTCGCCGCGATGGGCTGGTCTC ACTCAAAGACGAGCCCTCCCAGAATCTTCCTCCTTTCTTCTTCAATGCGCAACAATTAGAAGCTAATTTTGCGAGCAAAGGCCTCTCTCTGGACGAGATGGTGACGCTATCCGGTGCACA TTCGATTGGAGTCTCGCATTGCTCCTCCTTCTCGGACCGCTTGTACTCCTTCAATGCCACTCACACCCAAGACCCTTCAATGGACACCAAGTTAGCTAGTCAACTGAAATCTAAGTGTCC GAACAATGGAGGCGCTAGCGATCCCACTGTGCCATTGGACTTGGTCACGCCGAACAGGCTAGACAACAAGTACTACACTAATTTGAAGAACCACCGAGGCCTATTGACTTCTGATCAGAC TCTTTTTAACAGCCCTTCAACGGCTAATATCGTGAGGAGCAATGCAAATAATGGCGGAGCATGGGCTAACAAGTTCGCGGCAGCAATGGTGAAGATGGGATCGATCGACGTCCTCACTGG GAGTGAGGGTGAGATTAGGAGGAAATGCAGAGTGGTGAACTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTTCTCGTTCATCACCTTTCTGAACTCGGGTTCAGCAACTCTCCAAGTGGGATTCTACCGCTCCACTTGTCCGTCTGCGGAGTCCGTCGTCCGGAAAGCAGTGAACAAAGCGGTGGCC AAGAACCCTGGCATCGGTGCTGGGCTTATTAGAATGCACTTCCATGATTGCTTTGTTCGGGGTTGCGATGCTTCAATCTTGCTGGATTCGACCCCAGGCAACCCATCAGAGAAGGAACAT CCCGCAAACAACCCGAGCTTGCGAGGTTTTGAAGTCATCGATGAGGCGAAGGCTGAGCTAGAGTCTCTATGCCCGCAGAAGGTCTCATGCGCTGACATTCTTGCATTCGCAGCACGCGAC AGTGCCTACAAACTCGGCAGCATCAACTACGCAGTCCCAGCGGGTCGCCGCGATGGGCTGGTCTCACTCAAAGACGAGCCCTCCCAGAATCTTCCTCCTTTCTTCTTCAATGCGCAACAA TTAGAAGCTAATTTTGCGAGCAAAGGCCTCTCTCTGGACGAGATGGTGACGCTATCCGGTGCACATTCGATTGGAGTCTCGCATTGCTCCTCCTTCTCGGACCGCTTGTACTCCTTCAAT GCCACTCACACCCAAGACCCTTCAATGGACACCAAGTTAGCTAGTCAACTGAAATCTAAGTGTCCGAACAATGGAGGCGCTAGCGATCCCACTGTGCCATTGGACTTGGTCACGCCGAAC AGGCTAGACAACAAGTACTACACTAATTTGAAGAACCACCGAGGCCTATTGACTTCTGATCAGACTCTTTTTAACAGCCCTTCAACGGCTAATATCGTGAGGAGCAATGCAAATAATGGC GGAGCATGGGCTAACAAGTTCGCGGCAGCAATGGTGAAGATGGGATCGATCGACGTCCTCACTGGGAGTGAGGGTGAGATTAGGAGGAAATGCAGAGTGGTGAACTAG |
Retrieve as FASTA
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