Entry information : SmPrx[P]13b_7
Entry ID 8141
Creation 2011-02-23 (Christophe Dunand)
Last sequence changes 2012-05-04 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-05-04 (Christophe Dunand)
Peroxidase information: SmPrx[P]13b_7
Name SmPrx[P]13b_7
Class Class III peroxidase     [Orthogroup: Prx038]*
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx[P]13b_7
start..stop
S start..stop
SmPrx13-1_0 237 3e-79 1..165 1..181
SmPrx14-1_0 237 3e-79 1..165 1..181
SmPrx13-2_57 235 1e-78 1..165 1..181
SmPrx14-2_57 227 2e-75 1..165 1..181
Literature and cross-references SmPrx[P]13b_7
DNA ref. Phytozome 12:   scaffold_7 (1951520..1952101)
Protein sequence: SmPrx[P]13b_7
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   163 (144)
PWM (Da):   %s   17202.5 (15246.4)  
PI (pH):   %s   6.65 (6.33) Peptide Signal:   %s   cut: 20 range:20-163
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSWRGNILV LLLLSLS*Cx LDHDESGGYK NGYHSYSRSC PQAKRIIRDT LSKHTDWDRT IPAGVLRLHF HDCFIQDCDG SVLLDxxxxD GSKV*KLSLP SLMSACPGVV SCADTLAIAA 
RDSTVMVREK YYQVPTGCYD GRVSIQENSN TLQSPFGDAS ALIKN 

Retrieve as FASTA  
Remarks Pseudogen (frame shift, stop codons in frame and last exon is missing).
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGAAGTT GGAGAGGGAA CATTTTGGTT TTGCTTCTGC TGTCTCTGAG CTAGTGTTnn TTGGATCATG ATGAGAGTGG AGGATACAAG AATGGCTACC ACAGTTACTC GAGATCCTGT  CCTCAAGCCA AGAGAATCAT CAGGGACACT CTGAGCAAGC ACACCGATTG GGACAGGACG ATACCAGCAG GAGTTCTTCG CTTGCACTTC CACGACTGTT TCATCGACAG GAGTAGCTTT  GCAAGATTTA AATTCTTGTC TTCTAACTTT GCTGTTCTTC AGGACTGTGA TGGATCGGTT CTTCTCGACT nnnnnnnnnn nGATGGAAGT AAAGTGTAAA AGTTGTCCCT TCCAAGCCTC  ATGTCTGCCA AGAGCTTCAT TTTTGTCCTG GTGTTGTCTC CTGCGCTGAC ACTCTTGCCA TAGCTGCCAG AGATTCAACC GTCATGGTAA GGTTTAGCAT CTTTTATCAA GTTCTAAGAT 
GGAGAGAAAA GTATTACCAA GTCCCAACTG GATGCTACGA CGGAAGAGTT TCCATCCAGG AAAACAGCAA CACCTTACAA TCTCCGTTTG GGGATGCATC AGCTCTCATT AAAAAC 

Retrieve as FASTA