Entry information : EgrPrx35
Entry ID 8152
Creation 2011-02-25 (Qiang Li)
Last sequence changes 2011-03-01 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-02-15 (Qiang Li)
Peroxidase information: EgrPrx35
Name EgrPrx35
Class Class III peroxidase    [Orthogroup: Prx010]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx35
start..stop
S start..stop
EguPrx35 660 0 1..321 1..321
EgrPrx38 654 0 1..321 1..321
EguPrx38 653 0 1..321 1..321
EgrPrx41 647 0 1..321 1..321
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8152' 'join(11201177..11201398,11201517..11201711,11201850..11202398)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 11201177..11201398 220 N° 2 11201517..11201711 193 N° 3 11201850..11202398 547  
join(11201177..11201398,11201517..11201711,11201850..11202398)


exon

Literature and cross-references EgrPrx35
DNA ref. Phytozome 12:   scaffold_1 (11201177..11202398)
Protein sequence: EgrPrx35
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (300)
PWM (Da):   %s   35465.94 (33115.7)  
PI (pH):   %s   9.04 (9.04) Peptide Signal:   %s   cut: 22 range:22-321
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFLTLFQALLILSLTASTLSTRPYKNDLTPYFYDYVCPQALPAIKRVVEGAVQQERRMGASLLRLHFHDCFVNGCDGSILLDSTATIESEKFAAPNNNSARGFEVIDQIKAEVDRVCGR
PVVSCADILAVTARDSVVALGGPSWKVQLGRRDSMMASRTTANNDIPAPNMDLPALINNFKKQGLKVKDLVALSGAHTIGFAQCFTFRNRTFNDSNINQAFAKNLRSYCPRTGSDSNLAS
LDPTPARFDTLYYNNLLTQKGLLHSDQALSTGESALELVKSYSYNYEAFWKDFAKSMVRMGNIKPLTGNQGQIRSNCRRVD*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, introns 1 and 2). No prediction from phytozome.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTTCTCACCCTCTTCCAAGCGCTTCTCATCTTGTCCCTCACGGCCTCAACTCTTTCGACTCGTCCCTACAAGAACGACCTCACGCCATACTTCTACGACTACGTTTGCCCTCAA
GCCTTGCCTGCCATCAAGCGTGTCGTTGAGGGGGCGGTGCAGCAAGAGCGACGCATGGGCGCTTCCTTGCTGCGCTTGCACTTTCACGACTGTTTCGTCAAT
ATGTAAGACATATGTGCC
AGCTAACTTTCACATTAATTTGTTCTCAAAAATAGTGATTACTATTCAGCGTAACACAACATTTGCCAACATTGATTTATGTTTGGGTGTCGAATGATGCAGGGTTGTGATGGGTCGATA
CTCTTGGATTCAACCGCAACCATCGAGAGTGAAAAGTTCGCGGCTCCTAATAACAATTCGGCTAGAGGTTTCGAAGTGATCGACCAAATAAAGGCGGAGGTTGACAGAGTATGTGGACGT
CCCGTGGTTTCTTGTGCAGACATCTTGGCTGTCACCGCTCGTGACTCTGTTGTTGCG
CGGTACGTCTAGTTTTACTGCATCCCGTGATGACCATTAATCAGCAAATCTAAATGGAGACCA
TCATTTGCTTAGTTGATTTTCATGCGCCGTAAGACATTGCCAATCCGAATTAGGTGTTAACTTCTTTCATATTTCAGTTAGGAGGGCCTTCGTGGAAAGTACAACTCGGACGAAGAGATT
CGATGATGGCGAGCAGGACGACGGCAAACAACGACATCCCTGCGCCGAACATGGACTTACCTGCCTTAATTAACAATTTCAAGAAACAAGGCCTTAAGGTCAAGGACTTGGTTGCGCTGA
GCGGCGCTCACACAATCGGCTTCGCACAGTGCTTTACCTTCAGGAATAGGACATTCAATGACAGCAACATCAACCAGGCATTCGCAAAGAATCTCCGGTCCTACTGCCCGCGCACAGGAA
GCGACTCTAACCTCGCAAGTTTAGATCCCACGCCAGCGCGTTTCGACACATTGTACTACAATAACCTGTTGACCCAGAAGGGCCTTCTTCACTCTGATCAGGCACTGTCAACTGGTGAAT
CCGCACTCGAGCTAGTGAAGAGCTATAGCTACAATTATGAAGCATTTTGGAAGGATTTCGCTAAATCGATGGTCAGGATGGGAAATATCAAGCCACTGACCGGAAACCAAGGTCAAATTC
GCTCGAATTGCCGGAGGGTGGATTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTTCTCACCCTCTTCCAAGCGCTTCTCATCTTGTCCCTCACGGCCTCAACTCTTTCGACTCGTCCCTACAAGAACGACCTCACGCCATACTTCTACGACTACGTTTGCCCTCAA
GCCTTGCCTGCCATCAAGCGTGTCGTTGAGGGGGCGGTGCAGCAAGAGCGACGCATGGGCGCTTCCTTGCTGCGCTTGCACTTTCACGACTGTTTCGTCAAT
GGTTGTGATGGGTCGATA
CTCTTGGATTCAACCGCAACCATCGAGAGTGAAAAGTTCGCGGCTCCTAATAACAATTCGGCTAGAGGTTTCGAAGTGATCGACCAAATAAAGGCGGAGGTTGACAGAGTATGTGGACGT
CCCGTGGTTTCTTGTGCAGACATCTTGGCTGTCACCGCTCGTGACTCTGTTGTTGCG
TTAGGAGGGCCTTCGTGGAAAGTACAACTCGGACGAAGAGATTCGATGATGGCGAGCAGGACG
ACGGCAAACAACGACATCCCTGCGCCGAACATGGACTTACCTGCCTTAATTAACAATTTCAAGAAACAAGGCCTTAAGGTCAAGGACTTGGTTGCGCTGAGCGGCGCTCACACAATCGGC
TTCGCACAGTGCTTTACCTTCAGGAATAGGACATTCAATGACAGCAACATCAACCAGGCATTCGCAAAGAATCTCCGGTCCTACTGCCCGCGCACAGGAAGCGACTCTAACCTCGCAAGT
TTAGATCCCACGCCAGCGCGTTTCGACACATTGTACTACAATAACCTGTTGACCCAGAAGGGCCTTCTTCACTCTGATCAGGCACTGTCAACTGGTGAATCCGCACTCGAGCTAGTGAAG
AGCTATAGCTACAATTATGAAGCATTTTGGAAGGATTTCGCTAAATCGATGGTCAGGATGGGAAATATCAAGCCACTGACCGGAAACCAAGGTCAAATTCGCTCGAATTGCCGGAGGGTG
GATTGA

Retrieve as FASTA