Entry information : EgrPrx[P]103
Entry ID 8158
Creation 2011-02-25 (Qiang Li)
Last sequence changes 2011-03-03 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Qiang Li
Last annotation changes 2012-02-28 (Qiang Li)
Peroxidase information: EgrPrx[P]103
Name EgrPrx[P]103
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]103
start..stop
S start..stop
EguPrx[P]103 166 4e-56 1..83 1..83
EglPrx[P]103 120 6e-38 4..83 1..64
EcamPrx[P]104 88 4e-25 9..54 1..46
EgrPrx[P]104 85 7e-24 1..54 1..54
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 29579974..29580225 252  
join(29579974..29580225)


exon

Literature and cross-references EgrPrx[P]103
DNA ref. Phytozome 12:   scaffold_7 (29579974..29580225)
Protein sequence: EgrPrx[P]103
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   83
PWM (Da):   %s   9431.71  
PI (pH):   %s   7.41
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

NSYYHLLLNG EGLLISDQEL YSSGLAIQTK KIAVQYAHDM AAFFQQFSES MVKMIAESCV IKTRLIFNLC WFFIQSRTYA NSS 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Short PS). No prediction from Phytozome. No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AACTCATACT ACCACTTGCT TTTGAATGGA GAGGGATTAC TCATCTCCGA CCAAGAACTG TATTCAAGTG GATTGGCGAT TCAGACCAAG AAGATTGCGG TACAGTATGC GCATGACATG  GCGGCTTTCT TCCAGCAGTT CTCCGAATCC ATGGTCAAGA TGATCGCTGA GTCATGTGTA ATAAAGACTC GTTTGATTTT TAATCTTTGT TGGTTTTTTA TCCAGAGTCG GACATATGCA 
AACTCGAGCT AA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AACTCATACT ACCACTTGCT TTTGAATGGA GAGGGATTAC TCATCTCCGA CCAAGAACTG TATTCAAGTG GATTGGCGAT TCAGACCAAG AAGATTGCGG TACAGTATGC GCATGACATG  GCGGCTTTCT TCCAGCAGTT CTCCGAATCC ATGGTCAAGA TGATCGCTGA GTCATGTGTA ATAAAGACTC GTTTGATTTT TAATCTTTGT TGGTTTTTTA TCCAGAGTCG GACATATGCA 
AACTCGAGCT AA 

Retrieve as FASTA