Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
318 (293) |
PWM (Da): |
33492.32 (30895.0) |
Transmb domain: |
o10-32i |
PI (pH): |
6.64 (6.65) |
Peptide Signal: |
cut: 26 range:26-318 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MACESSSVKPVYLLLLCFLLGTASAQLSSTFYSKSCPSALRTIKS GVSSAVSSEARMGASLLRLHFHDCFVNGCDASILLDDTTNFTGEKTAGANNNSIRGYEVIDTIKSHLESSCPGVVSCADILAIAARDSVVLGGPSWTVLLGRRDSTTASLTDANSDIPAPTLSLSDLITSFSNKGFTAKEMVALSGS HTIGQARCTSFRTRLYNENDINATFATSLNANCPSSGGDNNLSPLDTTSPTYFDNAYFKNLQTQKGLLHSDQQLFSGGSTDAQVNTYSSNSATFMTDFANAMVTMGNLSPLTGSSGQIRK NCRKVN |
Retrieve as FASTA
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Remarks |
complete sequence from genomic (chromo 1, 3 introns). No prediction from Phytozome. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTTGTGAGAGCTCTTCTGTCAAACCCGTCTACTTATTGTTGCTGTGTTTCCTCCTCGGAACAGCCTCAGCTCAGCTGTCCAGCACTTTCTACTCCAAATCCTGTCCCAGCGCCCTC CGCACCATTAAGTCTGGCGTGAGCTCCGCCGTGTCCAGCGAGGCCCGCATGGGCGCATCACTGCTCCGCCTTCACTTCCACGATTGCTTTGTCAATATGCAAGTCCCTCTCCTCTGTGTC TGTCCTCTCTTTCCCATTGATTTCTACCTTTGTTTCCCTTCTGTCATTCAAGCTTCATGCAAGCGTGCATGCATGATGCATCTTTGCGCCTGTACTTGTGAAACATTCCAACCAACCTCA TAGTCAGGAGCATCATTAGATTTCGCTTCTACGCATTGAATTAGTCGACTCTGACCGACCCCTCTTGGTATATTGTCGTGCCATGCATTTTTGCGAGTCTATTAGCATAATAATAACAGG CTCTGTTTATTGAAGTCGTTTTAGAATTAGAGCCATGTTTTCATCATACAGCAATAAAAGGCATGGCCCTTAGAATAAAAGCACTTATTTTTGGTGATTCAAAGAGAAAATTTTCATGAG TAATTCTAGCATACACCGCTAGTGTAAAAATATCATTCCATAAGCGGCCTTATCCACTAGATATTTTGGTGGTTAGGAAGAGATTTGGTAATTATAATCCTCCAATCATGGGTGGATAAG AATGTTGTTGTGTGTACTCTAATCTTTTTTTTTAAATTACAGACAGTATATGCTCTACTTTTCTTTATTACAAAAGCCATGCAGGTGAACGTACTTTATGCTGAGTATTTGTTGACAAGA TGTGTGTATGTGTATGATTAGCCCTGGTTTAAACCCGATGAACTCGATGATTTAGATCATGCAAAAGTCCTAAACGTTGCAGCTGGAAAAGAGAGAGAGAGATGGCCATGCTTTATAAGT CGGTGGTTGACTTTATGCGAACATCGCGTTTGGCAAAACCAATCAGTCTTTCTCAATAGGTTTCAATCATATTTTGATCACCGTCCTTTGGTTGCGATACTTTTCTACATTAAAAATCAT GTTTTATGGTAAAAGATCATTTTTAATGGAATTTGTTAATCCAATGGTATTCTAAAAATCACATTAGATCTTTGAATGAATGAATTGTGCCTTGTGCATGGCCTCACTAGTTTGCTTCCA ACACGAATTTAGAGTGACAATCTAAATTAACAAATCAATTTAGTATACCTTCTTTGTAATCCTCTTTGTATTCTTTGTGCATAATTTAAGAGCTGCCCACATCATAATGGACCTTTCTCC ATCAAACATGGCGTCTCTATTTTGATCTTGATATTTAAAGCCTAATCGATTTTTTAAATAACAAATATGATGTGTTTACAACTTTCTCGATTAGATTTGTGGGTTGCTTTTCCTTTTTCC TGTATAGGTTGGAAATCGTCTAGATTTTCAATTTTAATCGATAGATAATTGGTCATTTGAGAAGGCCAAACTCAGGCTAATTCTAGTGAATCATAAAGTCGCTGACTTTCCTCTGTTAAA TATTAAAGAACGCGCCATGTTGCTAACCAAAAATCTTGATTTAGAGAACTCTTCACAGCGCAATCATTTTGTTTCTAGTCCGACGATTATTGGATGCATTGTTCCTTGAGAAACAACACG GAGTAAAGTCAAAAGGCACGAGAAAGAGTGTTCCCCCCCCCGCCGCGCGGTCCAAACTGGTGTCTCTAGGCGTTCATAATGGGGGACAAAAAGGGGAGAACGATAAGGGAAACAACCAGT GTTTATGCTCTAACTTCAGAAAAAAATTAAAACACTCAAACCTCCTGTCTACAACTAACGAATGAAATGAATGCCAATCGGATCAATTTTCCATCTAGAAGGGCTGATTAATAATGTGTG GTGCAAAATATGAAATAGGGATGTGACGCATCGATTTTGTTGGATGACACCACGAACTTCACTGGGGAGAAGACTGCCGGGGCGAATAACAATTCCATACGGGGATACGAGGTGATTGAC ACGATCAAGTCCCATCTAGAGAGCAGCTGCCCCGGGGTCGTGTCTTGTGCAGACATCTTGGCCATCGCCGCGCGTGATTCTGTTGTTTTGCTGTAAGTGTACATTTTCTTCTTAACACTA GCAATCAATTGGGAGGAAAAAAAAAAAAAAAACCACTACGGTTTGCTTCAGTAACCACCCTTCTAACATGGAAAGGGAAGGTGAGGGGGTTCAAATCCTCATTTTCTCAAGAGGTTGAGG TGGGGACAATTTAGTTTCAAGTATGGGTTTCAACTCTCACGCCGTATAAGAAGGCAGGGCAGAAGTTTAAAAGTGAGAGTTAGAGTAAAAGTAGAGTAGGATTGACCAAAAAAAAAAAAG AGGAAAAAATCACATGCTATATTACCTATCTATATTAGTACTAACATGTTTGGATTTATTTGTTTATTTAATTTTCAGTTAGGTGGCCCAAGTTGGACAGTCTTATTAGGAAGAAGAGAC TCGACCACTGCAAGCCTAACTGATGCTAATAGCGACATTCCTGCCCCAACTTTGAGCCTTAGCGACCTCATCACTTCCTTCTCTAACAAAGGCTTCACTGCCAAAGAAATGGTGGCACTT TCAGAGGTCATTATTATTATTATTATTTTGCATTTTATAATAAAGAATTATAATAAAGTTCGACTGATATACTATGATCAATTTACAAAAACTGTTCGATTGTTGTTAATAGGATCGCAC ACGATAGGTCAAGCCCGATGCACAAGTTTCCGAACCCGGCTTTACAACGAGAACGACATCAACGCCACATTCGCAACGTCACTAAACGCAAACTGCCCAAGCTCCGGAGGTGACAATAAT CTCTCTCCTCTCGACACCACGAGCCCGACGTACTTCGACAATGCCTACTTCAAGAACTTGCAGACCCAAAAGGGGCTTCTTCACTCGGACCAACAATTGTTCAGTGGTGGTTCCACGGAC GCTCAAGTGAACACTTACAGCAGCAATTCGGCTACTTTCATGACAGATTTTGCTAACGCCATGGTGACGATGGGTAACCTCAGCCCGCTCACCGGCTCAAGCGGTCAAATTAGGAAGAAT TGCAGGAAAGTCAACTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTTGTGAGAGCTCTTCTGTCAAACCCGTCTACTTATTGTTGCTGTGTTTCCTCCTCGGAACAGCCTCAGCTCAGCTGTCCAGCACTTTCTACTCCAAATCCTGTCCCAGCGCCCTC CGCACCATTAAGTCTGGCGTGAGCTCCGCCGTGTCCAGCGAGGCCCGCATGGGCGCATCACTGCTCCGCCTTCACTTCCACGATTGCTTTGTCAATGGATGTGACGCATCGATTTTGTTG GATGACACCACGAACTTCACTGGGGAGAAGACTGCCGGGGCGAATAACAATTCCATACGGGGATACGAGGTGATTGACACGATCAAGTCCCATCTAGAGAGCAGCTGCCCCGGGGTCGTG TCTTGTGCAGACATCTTGGCCATCGCCGCGCGTGATTCTGTTGTTTTAGGTGGCCCAAGTTGGACAGTCTTATTAGGAAGAAGAGACTCGACCACTGCAAGCCTAACTGATGCTAATAGC GACATTCCTGCCCCAACTTTGAGCCTTAGCGACCTCATCACTTCCTTCTCTAACAAAGGCTTCACTGCCAAAGAAATGGTGGCACTTTCAGGATCGCACACGATAGGTCAAGCCCGATGC ACAAGTTTCCGAACCCGGCTTTACAACGAGAACGACATCAACGCCACATTCGCAACGTCACTAAACGCAAACTGCCCAAGCTCCGGAGGTGACAATAATCTCTCTCCTCTCGACACCACG AGCCCGACGTACTTCGACAATGCCTACTTCAAGAACTTGCAGACCCAAAAGGGGCTTCTTCACTCGGACCAACAATTGTTCAGTGGTGGTTCCACGGACGCTCAAGTGAACACTTACAGC AGCAATTCGGCTACTTTCATGACAGATTTTGCTAACGCCATGGTGACGATGGGTAACCTCAGCCCGCTCACCGGCTCAAGCGGTCAAATTAGGAAGAATTGCAGGAAAGTCAACTAA |
Retrieve as FASTA
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