Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
326 (306) |
PWM (Da): |
36172.97 (34021.8) |
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PI (pH): |
6.5 (6.25) |
Peptide Signal: |
cut: 21 range:21-326 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MKSFGLCLFI LVSSPCLLQA NLSSDYYTKT CPEFEETLVQ IVTDKQIAAP TTAVGTLRLF FHDCMVDGCD ASILVASTPR KTSERDADIN RSLPGDAFDV ITRIKTAVEL KCPNIVSCSD
ILVGATRSLI SMVGGPRVNV KFGRKDSLVS DMNRVEGKLA RPNMTMDHII SIFESSGLTV QEMVALVGAH TIGFSHCKEF ASRIFNKSDQ NGPVEMNPKY AAELRKLCAN YTNDEQMSAF
NDVFTPGKFD NMYYKNLKHG YGLLQSDHAI AFDNRTRSLV DLYAEDETAF FDAFAKAMEK VSEKNVKTGK LGEVRRRCDQ YNDYKG
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 1, no intron) and 2 cDNA. No EST. |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATTAGGATTA CCCCTTTTAA CACACATTCA AAATTTATTT GGTAGTGACT AGTGAATTTG GTCTTGTGAT ATTGAGTTGC TAATATATTG AAATTGAAAA TGTAGCAATC ATGATTCATG
CCTTCGGGTG GAAAAAAAAA ATCTCTCGTG AAATTTTTTG TGCCATCAAT ATGTGTTATC TAAATTTTTG CATGTGTCAA ATTGAATAAT CTGTTACAAA ATTGGATATC ACAAAATTTC
CATACTTGCG ATCCATTTGT CATATGTGAT CTCGGGTTCA ATAGGGCACA ATATGTTTAA GAGAACTTTG ACAGATAACA ATTATCAAAA TAAAATTGTT GACTAATACT AATGATAAGT
TGAAGGAGAA AAATAGCAAA AGATTTACAG ATACACCGAT CCCTAAGGTA AGGGAGAAAA ATAATGGATA AGAATCTTTT TCTTTGATAA AAGTGATGAA GAAACTAACA AGGTTTTTTC
TTGTCCAATT TCAAATGTAA ATTGAACCAT TTGCTCTTCT TCTTTAGTGT CTCGGACTTA TCACAAGTAC TTGGTTTCTT GTTCTTCTGT CTGCTGCTTT CTTCCTCTTC TTCTTCCTCT
TCCTCTTCCT CTTCTTCCTG TTCAGTTGGA GCAGGCGCCT TAGCCGCCGC CTTCTTGAAT GAGCTCTTTC TCATCCTGTT CTTGCTCGAG CTCCGCTTCA TCAATGGAAT CGTCGTGTAT
GCTGAGTGAA TTTCATTTCT CTGCTTTAAG AGCTCATCGA TCTGCAAAAA GACCATAAGA TAATCAGACT AAGCTAACCA TTTCAGAAAC TTACACATAG AATCTGGTCT AATTTACTCA
GTCATGACAC ATCTTCTCTT CGTTTTCTGT GAATGGTGGT TTGAAATTTA TAAACTTTCA TGAATAAAAG ACTAACCGAT TGCATTTCTT GAGCGTATCG ACTGGTCATA TCGGTGAACT
GCACAAGTAC TTCCCTGTAC TCTGTCTCAA ACTTTGCCAG
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAATCTT TTGGTTTATG TCTGTTTATT CTCGTATCTT CTCCATGTCT CCTTCAAGCC AATCTCTCGT CTGATTATTA CACCAAAACA TGTCCTGAAT TCGAGGAAAC ACTCGTACAA
ATCGTCACCG ATAAACAAAT TGCAGCTCCA ACAACAGCTG TCGGAACACT CCGTCTCTTT TTCCACGATT GCATGGTTGA TGGCTGCGAC GCCTCAATCC TCGTTGCTTC TACTCCACGT
AAAACCTCCG AACGTGACGC CGATATCAAC CGTTCTCTTC CTGGAGACGC ATTCGACGTA ATCACACGTA TCAAAACCGC CGTCGAGCTA AAATGTCCAA ACATTGTTTC TTGCTCCGAT
ATCCTCGTTG GTGCAACACG TAGTTTAATC TCAATGGTCG GAGGTCCGAG AGTTAACGTT AAGTTCGGTC GGAAAGATAG TCTTGTCTCT GATATGAATC GTGTTGAAGG AAAACTAGCT
CGACCTAACA TGACTATGGA TCATATCATT TCTATTTTCG AGTCTAGTGG TCTGACCGTT CAAGAAATGG TTGCTCTTGT TGGTGCTCAC ACCATTGGTT TCTCTCATTG CAAAGAGTTC
GCGAGTCGGA TCTTTAACAA GTCTGATCAA AATGGTCCGG TGGAGATGAA TCCGAAATAC GCGGCGGAGC TGAGGAAGTT GTGTGCGAAT TACACCAATG ATGAACAGAT GTCTGCGTTT
AATGACGTTT TTACTCCAGG GAAATTTGAT AATATGTATT ACAAGAATTT GAAGCACGGT TACGGGTTGC TCCAGTCCGA TCACGCGATT GCGTTTGACA ACAGGACGCG CTCGCTGGTG
GATCTTTACG CGGAGGACGA AACGGCGTTC TTTGACGCGT TTGCGAAGGC TATGGAGAAA GTTAGTGAGA AGAATGTGAA GACGGGGAAG CTTGGAGAAG TAAGAAGGCG GTGTGATCAA
TACAATGACT ACAAGGGATA A
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAATCTT TTGGTTTATG TCTGTTTATT CTCGTATCTT CTCCATGTCT CCTTCAAGCC AATCTCTCGT CTGATTATTA CACCAAAACA TGTCCTGAAT TCGAGGAAAC ACTCGTACAA
ATCGTCACCG ATAAACAAAT TGCAGCTCCA ACAACAGCTG TCGGAACACT CCGTCTCTTT TTCCACGATT GCATGGTTGA TGGCTGCGAC GCCTCAATCC TCGTTGCTTC TACTCCACGT
AAAACCTCCG AACGTGACGC CGATATCAAC CGTTCTCTTC CTGGAGACGC ATTCGACGTA ATCACACGTA TCAAAACCGC CGTCGAGCTA AAATGTCCAA ACATTGTTTC TTGCTCCGAT
ATCCTCGTTG GTGCAACACG TAGTTTAATC TCAATGGTCG GAGGTCCGAG AGTTAACGTT AAGTTCGGTC GGAAAGATAG TCTTGTCTCT GATATGAATC GTGTTGAAGG AAAACTAGCT
CGACCTAACA TGACTATGGA TCATATCATT TCTATTTTCG AGTCTAGTGG TCTGACCGTT CAAGAAATGG TTGCTCTTGT TGGTGCTCAC ACCATTGGTT TCTCTCATTG CAAAGAGTTC
GCGAGTCGGA TCTTTAACAA GTCTGATCAA AATGGTCCGG TGGAGATGAA TCCGAAATAC GCGGCGGAGC TGAGGAAGTT GTGTGCGAAT TACACCAATG ATGAACAGAT GTCTGCGTTT
AATGACGTTT TTACTCCAGG GAAATTTGAT AATATGTATT ACAAGAATTT GAAGCACGGT TACGGGTTGC TCCAGTCCGA TCACGCGATT GCGTTTGACA ACAGGACGCG CTCGCTGGTG
GATCTTTACG CGGAGGACGA AACGGCGTTC TTTGACGCGT TTGCGAAGGC TATGGAGAAA GTTAGTGAGA AGAATGTGAA GACGGGGAAG CTTGGAGAAG TAAGAAGGCG GTGTGATCAA
TACAATGACT ACAAGGGATA A
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAATCTT TTGGTTTATG TCTGTTTATT CTCGTATCTT CTCCATGTCT CCTTCAAGCC AATCTCTCGT CTGATTATTA CACCAAAACA TGTCCTGAAT TCGAGGAAAC ACTCGTACAA
ATCGTCACCG ATAAACAAAT TGCAGCTCCA ACAACAGCTG TCGGAACACT CCGTCTCTTT TTCCACGATT GCATGGTTGA TGGCTGCGAC GCCTCAATCC TCGTTGCTTC TACTCCACGT
AAAACCTCCG AACGTGACGC CGATATCAAC CGTTCTCTTC CTGGAGACGC ATTCGACGTA ATCACACGTA TCAAAACCGC CGTCGAGCTA AAATGTCCAA ACATTGTTTC TTGCTCCGAT
ATCCTCGTTG GTGCAACACG TAGTTTAATC TCAATGGTCG GAGGTCCGAG AGTTAACGTT AAGTTCGGTC GGAAAGATAG TCTTGTCTCT GATATGAATC GTGTTGAAGG AAAACTAGCT
CGACCTAACA TGACTATGGA TCATATCATT TCTATTTTCG AGTCTAGTGG TCTGACCGTT CAAGAAATGG TTGCTCTTGT TGGTGCTCAC ACCATTGGTT TCTCTCATTG CAAAGAGTTC
GCGAGTCGGA TCTTTAACAA GTCTGATCAA AATGGTCCGG TGGAGATGAA TCCGAAATAC GCGGCGGAGC TGAGGAAGTT GTGTGCGAAT TACACCAATG ATGAACAGAT GTCTGCGTTT
AATGACGTTT TTACTCCAGG GAAATTTGAT AATATGTATT ACAAGAATTT GAAGCACGGT TACGGGTTGC TCCAGTCCGA TCACGCGATT GCGTTTGACA ACAGGACGCG CTCGCTGGTG
GATCTTTACG CGGAGGACGA AACGGCGTTC TTTGACGCGT TTGCGAAGGC TATGGAGAAA GTTAGTGAGA AGAATGTGAA GACGGGGAAG CTTGGAGAAG TAAGAAGGCG GTGTGATCAA
TACAATGACT ACAAGGGATA A
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Retrieve as FASTA
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