Entry information : EgrPrx[P]141
Entry ID 8204
Creation 2011-03-11 (Qiang Li)
Last sequence changes 2012-12-04 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-22 (Christophe Dunand)
Peroxidase information: EgrPrx[P]141
Name EgrPrx[P]141
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]141
start..stop
S start..stop
EglPrx[P]141 187 4e-64 11..104 1..94
EguPrx[P]141 185 4e-63 10..104 1..95
EglPrx[P]139 174 3e-57 3..104 11..120
EgrPrx[P]139 176 9e-57 3..104 34..133
Literature and cross-references EgrPrx[P]141
DNA ref. Phytozome 12:   scaffold_9 (37907416..37907106)
Protein sequence: EgrPrx[P]141
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   103
PWM (Da):   %s   10794.55  
PI (pH):   %s   7.98
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

SIYSGSCLRA EAIIRSTIQA HFRSDPTVAP GLLRMHFHNR FV*GCDGSVL INGPNAEKTV PPNHLLRGYE VxITDAKTQL EAACPSVVSC ADILALVARN SVAL 

Retrieve as FASTA  
Remarks Pseudogene from genomic (part of exon 1 and exon 2 with stop in it). No prediction from phytozome. No EST. complement(join(37907106..37907416)).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGCATCTACT CAGGTTCGTG TCTGCGTGCC GAGGCCATTA TTAGGTCTAC GATTCAAGCC CATTTCAGGT CCGATCCCAC TGTGGCTCCT GGGCTGTTAA GGATGCACTT TCATAACCGC  TTCGTCTAGG GATGTGACGG TTCGGTCCTC ATCAATGGGC CCAACGCTGA GAAAACGGTG CCTCCGAACC ATTTGCTGAG AGGATATGAA GTGTGnATCA CTGACGCAAA GACCCAGCTC 
GAAGCTGCGT GTCCTAGTGT CGTTTCATGT GCTGATATTC TTGCTCTTGT GGCCCGTAAT TCCGTTGCTC TG 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGCATCTACT CAGGTTCGTG TCTGCGTGCC GAGGCCATTA TTAGGTCTAC GATTCAAGCC CATTTCAGGT CCGATCCCAC TGTGGCTCCT GGGCTGTTAA GGATGCACTT TCATAACCGC  TTCGTCTAGG GATGTGACGG TTCGGTCCTC ATCAATGGGC CCAACGCTGA GAAAACGGTG CCTCCGAACC ATTTGCTGAG AGGATATGAA GTGTGnATCA CTGACGCAAA GACCCAGCTC 
GAAGCTGCGT GTCCTAGTGT CGTTTCATGT GCTGATATTC TTGCTCTTGT GGCCCGTAAT TCCGTTGCTC TG 

Retrieve as FASTA