Entry information : CcarPrx01 (CysPrx1)
Entry ID 8214
Creation 2011-04-08 (Bruno Savelli)
Last sequence changes 2011-05-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-05-24 (Christophe Dunand)
Peroxidase information: CcarPrx01 (CysPrx1)
Name (synonym) CcarPrx01 (CysPrx1)
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Cynara
Organism Cynara cardunculus    [TaxId: 4265 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcarPrx01
start..stop
S start..stop
CcarPrx02 713 0 1..353 1..353
HaPrx35 596 0 6..353 7..355
LsaPrx04 515 0 23..309 1..287
NtPrx15 499 5e-179 3..339 1..338
Literature and cross-references CcarPrx01 (CysPrx1)
Literature Cardinali,A., Tursi,N., Ligorio,A., Giuffrida,M.G., Napolitano,L., Caliandro,R., Sergio,L., Di Venere,D., Lattanzio,V. and Sonnante,G. Purification, biochemical characterization and cloning of a new cationic peroxidase isoenzyme from artichoke. Plant Physiol. Biochem. 49 (4), 395-403 (2011)
mRNA ref. GenBank:   GU145300.1
Protein sequence: CcarPrx01 (CysPrx1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   353 (325)
PWM (Da):   %s   38272.34 (35414.7)  
PI (pH):   %s   7.74 (7.41) Peptide Signal:   %s   cut: 29 range:29-353
Sequence
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MAMASLKASS VATLLLFAVL ISLRGLEAQT PPVAPGLSYT FYQTTCPQLQ TIIRQQLQTV FNSDIGQAAG LLRLHFHDCF VQGCDGSVLL DGSASGPSEK SAIPNLTLRA QAFVIIENLH  RLVHNACNRT VSCADITALA ARDAVVLSGG PNYNIPLGRR DGLNFATTNV TLANLPPPFA NTTTLLNSLA LKGFNPTDVV ALSGGHTIGI AHCTSFESRL FPSRDPTMDQ TFFNNLRTTC 
PVLNTTNTTF MDIRSPNVFD NRYYVDLMNR QGLFTSDQDL YTDSRTRGIV TNFAINQTLF FQNFVNAMIK MSQLSVLTGT QGEIRANCSR RNGNDLFILP GMEKNDDGKV ASY 

Retrieve as FASTA  
Remarks
CDS
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ATGGCCATGG CTTCCTTGAA AGCTTCATCC GTAGCCACAC TTCTGCTATT TGCTGTACTC ATATCGTTGA GAGGTTTAGA AGCTCAAACG CCGCCTGTGG CGCCGGGGCT GTCTTATACA  TTCTACCAGA CCACCTGTCC GCAGCTACAA ACCATCATAC GACAACAGCT TCAAACCGTT TTCAACTCCG ATATCGGCCA AGCTGCCGGT TTACTTCGAC TTCACTTCCA TGATTGCTTC  GTTCAAGGTT GTGACGGCTC GGTCTTGCTC GATGGTTCCG CTAGCGGACC GAGTGAGAAA AGCGCAATAC CAAACTTGAC TTTGCGAGCC CAAGCATTTG TTATCATCGA AAATCTTCAC  AGGCTCGTGC ATAATGCTTG CAATCGAACC GTCTCTTGTG CTGATATTAC TGCTCTTGCT GCTCGTGACG CAGTCGTCTT GTCTGGTGGA CCGAACTACA ACATACCCTT AGGAAGACGT  GACGGGCTTA ACTTTGCCAC AACAAACGTA ACGCTAGCCA ACCTTCCTCC ACCCTTCGCC AACACGACAA CTCTATTGAA TTCCCTTGCA TTGAAAGGGT TCAACCCCAC TGACGTCGTG  GCGCTCTCTG GCGGCCACAC CATCGGGATA GCCCATTGCA CCTCTTTTGA ATCCCGCCTC TTCCCATCGC GAGACCCGAC TATGGACCAA ACCTTTTTCA ACAATCTAAG AACTACATGT  CCTGTGCTAA ATACGACCAA TACCACCTTC ATGGACATTC GGTCTCCAAA TGTGTTTGAC AATAGGTACT ACGTCGATCT CATGAACCGC CAAGGGCTTT TCACCTCCGA CCAAGACTTA  TATACAGATA GCAGAACTCG GGGTATCGTC ACGAACTTTG CTATCAATCA AACGTTGTTT TTCCAAAACT TTGTGAATGC AATGATTAAG ATGAGCCAAT TGAGCGTATT GACGGGCACA 
CAAGGAGAAA TCCGTGCAAA TTGTTCGCGT AGGAACGGAA ATGACTTGTT CATATTACCG GGCATGGAGA AGAATGACGA CGGGAAGGTG GCATCGTATT AG 

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cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTATGGCCAT GGCTTCCTTG AAAGCTTCAT CCGTAGCCAC ACTTCTGCTA TTTGCTGTAC TCATATCGTT GAGAGGTTTA GAAGCTCAAA CGCCGCCTGT GGCGCCGGGG CTGTCTTATA  CATTCTACCA GACCACCTGT CCGCAGCTAC AAACCATCAT ACGACAACAG CTTCAAACCG TTTTCAACTC CGATATCGGC CAAGCTGCCG GTTTACTTCG ACTTCACTTC CATGATTGCT  TCGTTCAAGG TTGTGACGGC TCGGTCTTGC TCGATGGTTC CGCTAGCGGA CCGAGTGAGA AAAGCGCAAT ACCAAACTTG ACTTTGCGAG CCCAAGCATT TGTTATCATC GAAAATCTTC  ACAGGCTCGT GCATAATGCT TGCAATCGAA CCGTCTCTTG TGCTGATATT ACTGCTCTTG CTGCTCGTGA CGCAGTCGTC TTGTCTGGTG GACCGAACTA CAACATACCC TTAGGAAGAC  GTGACGGGCT TAACTTTGCC ACAACAAACG TAACGCTAGC CAACCTTCCT CCACCCTTCG CCAACACGAC AACTCTATTG AATTCCCTTG CATTGAAAGG GTTCAACCCC ACTGACGTCG  TGGCGCTCTC TGGCGGCCAC ACCATCGGGA TAGCCCATTG CACCTCTTTT GAATCCCGCC TCTTCCCATC GCGAGACCCG ACTATGGACC AAACCTTTTT CAACAATCTA AGAACTACAT  GTCCTGTGCT AAATACGACC AATACCACCT TCATGGACAT TCGGTCTCCA AATGTGTTTG ACAATAGGTA CTACGTCGAT CTCATGAACC GCCAAGGGCT TTTCACCTCC GACCAAGACT  TATATACAGA TAGCAGAACT CGGGGTATCG TCACGAACTT TGCTATCAAT CAAACGTTGT TTTTCCAAAA CTTTGTGAAT GCAATGATTA AGATGAGCCA ATTGAGCGTA TTGACGGGCA  CACAAGGAGA AATCCGTGCA AATTGTTCGC GTAGGAACGG AAATGACTTG TTCATATTAC CGGGCATGGA GAAGAATGAC GACGGGAAGG TGGCATCGTA TTAGGGGAGA TCTTGTGTTT 
GTGTCGAAAT AATATGTAAG ATTTGCTAAA ACATGTTTTG AAGTGATTAA TGTGTCAATG TATTATGTTT AATTATGAAT ATATGGTTTG TTGTGTTC 

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