Entry information : NtPrx[P]38-1B(Nitab4.5_0000502g0090)
Entry ID 8237
Creation 2011-04-11 (Christophe Dunand)
Last sequence changes 2011-04-11 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2022-08-18 (Christophe Dunand)
Peroxidase information: NtPrx[P]38-1B(Nitab4.5_0000502g0090)
Name NtPrx[P]38-1B(Nitab4.5_0000502g0090)
Class Class III peroxidase     [Orthogroup: Prx201]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx[P]38-1B
start..stop
S start..stop
NtPrx38-1A 617 0 1..327 11..338
LePrx52 553 0 19..327 24..333
StPrx40 509 0 14..327 22..337
GmPrx59 429 3e-152 2..327 9..326
Literature and cross-references NtPrx[P]38-1B(Nitab4.5_0000502g0090)
Protein sequence: NtPrx[P]38-1B(Nitab4.5_0000502g0090)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (265)
PWM (Da):   %s   35494.08 (28926.3)  
PI (pH):   %s   8.8 (7.03) Peptide Signal:   %s   cut: 22 range:22-286
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MHSSQFLLLL LLLSAIFTSS CINAQLQRNF YRNSCPNVES IVRSAVEDKF KQTIVTAAAT LRLFFHDCFI QGCDASILLR SSGNNTAEKD HLENLSLAGD GFDTVIKAKA AVDNVPSCNN  KVSCADILAI AARDVVALAG GPNYAVELGR RDGRMSSQTS VQNNLPHSSS DIEKLLPMFA SRGLTIRHLI ALSGAHTLGF SHCNQFSSRI YNFNSTHNVD PTIDATYAKK LQEMCPQDAP 
GVVIPMDPDT PQVFDNTYYK NLQRGKGLFT SDQTLFTKRG SRRIVNIFAS NRTAFERVFI AAxxKLGRFG VKTGNLGEIR KDCAVVN 

Retrieve as FASTA  
Remarks Partial sequence from genomic and EST (3' end is missing, two frame shift).. Uncorrect prediction from SGN (frame in 3'). Short predcition from TN90 (stop in frame in last exon), same frame shift for K326 and BX.
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AATATAGGGA ATAAAGAGAG AAGTAGAAAA TATGCATAGT AGCCAATTTC TTCTCTTATT GCTTCTTCTG TCTGCCATTT TCACAAGTAG TTGTATCAAT GCTCAGCTCC AACGGAACTT  TTATCGGAAT TCATGTCCAA ATGTTGAGTC CATCGTCCGA TCAGCAGTTG AAGACAAGTT TAAACAGACA ATTGTTACAG CAGCAGCAAC CCTTAGACTC TTCTTCCATG ATTGCTTTAT  ACAGGGTTGT GATGCTTCCA TCTTACTGAG GTCGTCAGGA AATAACACAG CAGAAAAGGA TCATCTGGAA AATCTGTCCC TTGCTGGAGA TGGATTTGAC ACTGTTATTA AAGCCAAAGC  TGCAGTCGAT AATGTGCCTT CTTGTAACAA CAAAGTCTCT TGTGCTGATA TCTTGGCCAT CGCCGCTAGA GATGTCGTTG CATTGGCAGG AGGACCAAAC TATGCTGTTG AATTAGGAAG  GAGGGACGGG AGAATGTCTT CACAAACTAG TGTGCAAAAC AATCTACCCC ACTCAAGCTC CGACATAGAG AAGCTCCTTC CTATGTTTGC CTCTCGTGGT CTGACTATCA GACATTTGAT  TGCCCTCTCA GGAGCACATA CACTAGGATT TTCACATTGC AACCAGTTCT CAAGCAGGAT ATACAACTTT AACAGCACAC ACAACGTTGA TCCAACAATT GATGCAACCT ATGCTAAGAA  ACTCCAGAAA TGTGCCCACA AGATGCACCT CCTGAGTAGT CATCCCATGG ATCCAGACAC CCCTCAGTGT TCGATACACA TATACAGACC TACAGAGAGG GAAAGGGCTT GTTCACTTCT 
GACAGACACT GTTACTAAAG GGGTCAGGAG ATAGTGATTT CTTTGCATCA ACAGAAGCTT TGAAGGTCTT CATTGCTGCA TG 

Retrieve as FASTA