Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
331 (306) |
| PWM (Da): |
35789.48 (33185.1) |
Transmb domain: |
i5-27o |
| PI (pH):
| 9.35 (9.36) |
Peptide Signal:
| cut: 26 range:26-331 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAKFGYLGNF LVLCILLGIV GSSHAQLQLN FYSKSCPKAE KIIQDYVQKH IPNTPSLAAA LLRLQFHDCF VRGCDGSVLL NFTSSTKKKT EKVAIPNQTL RGFSFIDDVK KIVEAECPGV
VSCADIVALV SRDSVVVTGG PYWNVPTGRR DGRISNASEA LANIPPPTSN FSSLQTSFAS KGLDLKDLVL LSGAHTIGVS HCSSFSTRLY NFTGVLGKQD PSLDSEYAAY LKAKKCKSIN
DNTTIVEMDP GSSRTFDLSY FKLLLKRKGL FQSDAALTTS ATTKSYINQL VQGSLKQFNA EFAKAMEKMG SIEVKTGSAG EIRKQCAFVN N
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic and EST. 46-1A and 46-2A are both on the border of two small scaffold (found in the 4 Nicotiana species, same gene or real tandem and recent duplication as for 46-1B and 46-2B). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCAAAAT TTGGCTATTT GGGTAATTTT CTAGTGTTAT GTATTCTACT AGGAATAGTT GGTTCTAGCC ATGCTCAGTT ACAGCTCAAC TTCTATTCCA AGAGCTGTCC AAAAGCAGAG
AAGATAATTC AAGATTATGT CCAAAAGCAC ATCCCAAATA CTCCATCTCT TGCAGCTGCC TTACTCAGAC TGCAGTTCCA CGATTGTTTT GTCAGGGTAA GTTTTTCACA TATATGCAAG
CTCTATACTC AACAGTTACT TAACTGCCAT TCTTGAAGGG CAGCCCGGTA CACTAAGCTC TCGCTATGCA TGGGATCTGT GAAAGGGCCG GACCACAAAG GTCTATTGTA CACCGCCTTA
CCCTGCATCT CAGAGGAGGT CACATGACAG CAACTTTACC AGTTGCGCCA ATACTCCCCT TTACTGCCAT TCTTGAAGCA GTGTAATTAT TTTTTTTAAT CTTCCTTTGG AATTTTACAG
GGTTGTGATG GATCTGTGCT TCTGAATTTC ACTTCGAGCA CGAAAAAAAA GACTGAAAAA GTGGCAATCC CTAATCAAAC ACTGAGAGGC TTCTCATTCA TTGATGACGT GAAGAAAATA
GTTGAAGCTG AATGCCCTGG CGTTGTCTCT TGTGCAGATA TTGTTGCCTT AGTTTCTAGA GACTCCGTTG TGGTCACAGT AAGTACAAAA CTTGAACCAG CTTGTTAATT GGTTCCAACT
TGTCGGGCCA TATTTGCTTA TGTCGTATCT TGCTCAGACC AATAAATAGA ACTGAAGTTA TACTTCAAGT CTCCAATAAA TATCCAAAGT AACTAGTTAG AGCAAGTATG AAAGGGCTAA
ACTAGATGAA ATATGTTCTT AATCTCATTG TCTGATCCCT TTTTCTTCTC TGCATGATAG GGAGGCCCTT ACTGGAATGT TCCAACTGGT AGAAGAGATG GAAGAATATC TAACGCGTCC
GAGGCCTTGG CAAACATCCC TCCTCCAACT AGTAACTTTT CCAGTCTCCA GACATCTTTT GCAAGCAAGG GTCTTGACCT AAAAGACTTG GTCCTATTGT CTGGTAAGTT TAAATTAGTA
CATATATCTA CTTCTCCCTA TATTAAGATC TTCCATATAT TTAATTAGTT TTTCTTAACA AGAATCATTA TTACTATGAA CTATTTGTTA TTAGGTGCAC ATACTATTGG AGTTTCTCAT
TGCTCGTCAT TTTCAACACG TTTATACAAT TTTACCGGAG TTTTGGGCAA ACAAGATCCA TCTCTAGACA GCGAATATGC AGCTTATCTT AAGGCGAAGA AATGCAAATC AATCAATGAC
AATACCACGA TCGTTGAAAT GGATCCTGGA AGTTCAAGAA CCTTTGATCT TAGCTACTTT AAGCTTTTGC TAAAGAGAAA AGGGTTATTC CAATCTGATG CAGCCTTGAC AACAAGTGCG
ACAACAAAGT CATACATCAA CCAGCTAGTA CAAGGATCAC TCAAACAGTT CAACGCTGAA TTTGCCAAGG CCATGGAGAA AATGGGCAGT ATTGAAGTCA AGACTGGCTC TGCTGGTGAG
ATTAGGAAGC AATGTGCATT TGTGAATAAT TAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGGTGTGTGT AGCAACTCGA ACAAAGAAAG AGAGACATCT TTCAATTCAA AGTTTCAAAA ACAGGTGTAG TAATTAAAAT GGCAAAATTT GGCTATTTGG GTAATTTTCT AGTGTTATGT
ATTCTACTAG GAATAGTTGG TTCTAGCCAT GCTCAGTTAC AGCTCAACTT CTATTCCAAG AGCTGTCCAA AAGCAGAGAA GATAATTCAA GATTATGTCC AAAAGCACAT CCCAAATACT
CCATCTCTTG CAGCTGCCTT ACTCAGACTG CAGTTCCACG ATTGTTTTGT CAGGGGTTGT GATGGATCTG TGCTTCTGAA TTTCACTTCG AGCACGAAAA AAAAGACTGA AAAAGTGGCA
ATCCCTAATC AAACACTGAG AGGCTTCTCA TTCATTGATG ACGTGAAGAA AATAGTTGAA GCTGAATGCC CTGGCGTTGT CTCTTGTGCA GATATTGTTG CCTTAGTTTC TAGAGACTCC
GTTGTGGTCA CAGGAGGCCC TTACTGGAAT GTTCCAACTG GTAGAAGAGA TGGAAGAATA TCTAACGCGT CCGAGGCCTT GGCAAACATC CCTCCTCCAA CTAGTAACTT TTCCAGTCTC
CAGACATCTT TTGCAAACAA GGGTCTTGAC CTAAAAGACT TGGTCCTATT GTCTGGTGCA CATACTATTG GAGTTTCTCA TTGCTCGTCA T
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Retrieve as FASTA
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