Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
331 (306) |
| PWM (Da): |
35604.28 (32999.9) |
Transmb domain: |
i5-27o |
| PI (pH):
| 8.91 (8.87) |
Peptide Signal:
| cut: 26 range:26-331 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAKFGYLGNF LVLCILLGIV GSSHAQLQLN FYSKSCPKAE KIIQDYVQKH IPNAPSLAAA LLRLQFHDCF VRGCDASVLL NFTSSTKNQT EKVAIPNQTL RGFSFIDDVK KAVEAECPGV
VSCADIVALV SRDSVVVTGG PYWNVPTGRR DGKISNASEA LANIPPPTSN FSSLQTSFAS KGLDLKDLVL LSGAHTIGVS HCSSFSTRLY NFTGVLGKQD PSLDSEYAAY LKAKKCKSIN
DNTTIIEMDP GSSSAFDLSY FKLLLKRKGL FQSDAALTTS ATTKSYINQL VQGSLKQFNA EFAKAMEKMG SIEVKTGSAG EIRKQCAFVN S
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic and ESTs. 46-1A and 46-2A are both on the border of two small scaffold (found in the 4 Nicotiana species, same gene or real tandem and recent duplication as for 46-1B and 46-2B). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCAAAAT TTGGCTATTT GGGTAATTTT CTAGTGTTAT GTATTCTACT AGGAATAGTT GGTTCTAGCC ATGCTCAGTT ACAGCTCAAC TTCTATTCCA AGAGCTGTCC AAAAGCAGAG
AAGATAATTC AAGATTATGT CCAAAAGCAC ATCCCAAATG CTCCATCTCT TGCAGCTGCC TTGCTCAGAC TGCAATTTCA CGACTGCTTT GTTAGGGTAA GTGTTTCACA TGTATGCAAG
CTCTATATTC ACTCAACTGT TACTGCCATT CTTGAAGGGC AGCCAGGTGA ACCAAGCTTC CGCTATGCGC GGAGACCCGG GAAGGGCTAG ACCACAAAGT TCTACTGTAC ACAGCCTTAC
CCGGCATTTC TGCAAGAGGC TGTTTTCACG GCTCGAACGT GTTACCTTCT GGTCACATGA CAACAACTTT ACTAGTTGCG ACAAGGCTCC CTTTCACTGC CATTCTTGAA GTTGTGTAAT
TATTATTTTT AATCTTCATT TGGGATTTTA CAGGGTTGTG ATGCATCTGT GCTTCTGAAT TTCACTTCGA GCACGAAAAA CCAGACTGAA AAAGTGGCTA TCCCTAATCA AACACTGAGA
GGCTTCTCAT TCATTGATGA TGTGAAGAAA GCAGTTGAAG CTGAATGCCC TGGAGTAGTC TCTTGTGCAG ATATTGTTGC CTTAGTTTCT AGAGACTCCG TCGTGGTCAC GGTAAGTACA
AATCTTGAAC CAACTTGTTA ATTGGTTTCC AACTTGTCGG ACCATATTTG CTTATGTCGT ATCTTTGCTC AGACCAATAA ATAAAGTTGA AGTTATAATT CAAGCCACTA ATAAAAATCC
GAAGTAACAA GTTATAGTAA GTATGAAAGG GCTAAATTGA ACGAAATATG TTCTTAATCT CATTGTCTGA TCCCTTTTTT TTTATTTGCA TGATAGGGAG GCCCTTACTG GAATGTTCCA
ACTGGTAGAA GAGATGGAAA AATATCAAAT GCGTCCGAGG CCTTGGCAAA CATCCCTCCT CCAACTAGTA ACTTCTCCAG TCTTCAGACA TCTTTTGCTA GCAAAGGTCT TGACCTAAAA
GACCTGGTCC TATTGTCTGG TAAGTTTAAA TTAGTACATA TTTCTTACTT GTTCTATATT AAGATTTTCC ATATATTTCA TTAGTTTTTC TTAACAAGAA TCATTATTAC GTACTATGAA
CAATTTGTTA TTAGGTGCAC ATACTATTGG AGTTTCTCAT TGCTCGTCAT TTTCAACACG TTTATACAAT TTTACCGGAG TTTTGGGCAA ACAAGATCCA TCTCTAGACA GCGAATATGC
AGCTTATCTT AAGGCGAAGA AATGCAAATC AATCAATGAC AATACCACGA TCATTGAAAT GGATCCTGGA AGTTCCAGTG CGTTTGATCT TAGCTACTTT AAGCTTTTGC TAAAGAGAAA
AGGGCTATTC CAATCTGATG CAGCCTTGAC AACAAGTGCG ACAACAAAGT CATACATCAA CCAGCTAGTA CAAGGATCAC TCAAACAGTT CAATGCTGAA TTCGCTAAGG CCATGGAGAA
AATGGGCAGT ATTGAAGTCA AAACTGGCTC TGCTGGTGAG ATTAGGAAGC AATGTGCATT TGTAAATAGT TAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGTGTGTGCA GCAACTCGAA CAAAGAAAGA GAGACATCTT TCAATTCAAA AGTTTCAAAA ACAGGTGTAG TAATTAAAAT GGCAAAATTT GGCTATTTGG GTAATTTTCT AGTGTTATGT
ATTCTACTAG GAATAGTTGG TTCTAGCCAT GCTCAGTTAC AGCTCAACTT CTATTCCAAG AGCTGTCCAA AAGCAGAGAA GATAATTCAA GATTATGTCC AAAAGCACAT CCCAAATGCT
CCATCTCTTG CAGCTGCCTT GCTCAGACTG CAATTTCACG ACTGCTTTGT TAGGGGTTGT GATGCATCTG TGCTTCTGAA TTTCACTTCG AGCACGAAAA ACCAGACTGA AAAAGTGGCT
ATCCCTAATC AAACACTGAG AGGCTTCTCA TTCATTGATG ATGTGAAGAA AGCAGTTGAA GCTGAATGCC CTGGAGTAGT CTCTTGTGCA GATATTGTTG CCTTAGTTTC TAGAGACTCC
GTCGTGGTCA CGGGAGGCCC TTACTGGAAT GTTCCAACTG GTAGAAGAGA TGGAAAAATA TCAAATGCGT CCGAGGCCTT GGCAAACATC CCTCCTCC
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Retrieve as FASTA
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