Entry information : SbPrx01 (Sobic.001G045100.1[2.1] / Sb01g004160 [1.4])
Entry ID 827
Creation 2006-01-17 (Christophe Dunand)
Last sequence changes 2006-01-17 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2014-07-31 (Christophe Dunand)
Peroxidase information: SbPrx01 (Sobic.001G045100.1[2.1] / Sb01g004160 [1.4])
Name (synonym) SbPrx01 (Sobic.001G045100.1[2.1] / Sb01g004160 [1.4])
Class Class III peroxidase    [Orthogroup: Prx373]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum bicolor    [TaxId: 4558 ]
Cellular localisation N/D
Tissue type Roots
Inducers Acid treatment
Alkaline treatment
Repressor N/D
Best BLASTp hits
Perox score E-value SbPrx01
start..stop
S start..stop
SiPrx124 477 7.12e-171 30..339 24..327
EcamPrx176 324 9.8e-111 18..339 5..325
EguPrx176 324 1e-110 18..339 5..325
MePrx127 322 8.11e-110 18..339 4..324
Gene structure Fichier Exons


exon

Literature and cross-references SbPrx01 (Sobic.001G045100.1[2.1] / Sb01g004160 [1.4])
Literature Cordonnier-Pratt,M.-M. et al., unpublished
DNA ref. Phytozome 12:   chromosome_1 (3356399..3357418)
Cluster/Prediction ref. PlantGDB:   SbGSStuc11-12-04.10642.1
Protein sequence: SbPrx01 (Sobic.001G045100.1[2.1] / Sb01g004160 [1.4])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339 (300)
PWM (Da):   %s   36058.06 (32174.0) Transmb domain:   %s   i21-43o
PI (pH):   %s   6.83 (6.30) Peptide Signal:   %s   cut: 40 range:40-339
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MHMAACTRTS TGSNKPPSLC LLLLVHALLL AIASSPAGGL QVGFYQQTCP QAESIVRNVT WARAAADPSL AGKLLRLYFH DCFPQGCDAS VLLDGRGTEK AAPPNQSLGG LDVVDAAKAA  LEAACPGTVS CADVVALATR DAVSFQFRRS LWQVETGRRD NRFSDEAHAT DLPSPEFVFP LLRDSFAKRG LGVRDLVALS GAHTLGHTDC QFVSPRLYTF QGNGGVDPFI DPSYARELMR 
QCPATPPPSS SSSSGKVALD PGSEFTFDTS YYATIKANRG ALHTDSVLLH DDEAARLVDE MHDQGKFLTA FAASIQKLGA FGVITGNKGE IRRNCHVVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, no intron) and 2 ESTs.
DNA
Send to BLAST
CDS
Send to BLAST