Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
343 (314) |
PWM (Da): |
37314.09 (34160.4) |
Transmb domain: |
i7-29o |
PI (pH):
| 8.74 (8.85) |
Peptide Signal:
| cut: 30 range:30-343 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MDSKSFNLSV LALLACLILS FSVPSLAYGK KTTWPPLRVG FYRYRCPPAE EIVKNVVYKA VSRNPGIAAG LIRLHFHDCF VRGCDASVLL DGPNSEKEGV PNKNSLRGFE VVDAAKAQLE
DACPGTVSCA DILAFAARDS SYKVGNIYYD VEAGRRDGRV SIDSETLANL PSPFVDAKEL IKNFARKGMS ADEMVTLSGA HSIGIAHCAV FANRLYPQNN QQNLPIYPEY ANFLKSICPP
EALTNGTGVT NPANLDVLTP NRLDNKYYAA LKSKKGLLIS DQGLLANPTT AKMVNFNARY GSVWAKKFAA AMIHMGQLDV LTGQKGEIRS NCHFNNLLPS LNL*
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic (scaffold). Found in 3 independent scaffolds Nitab4.5_0247260 (end exon 4 is missing, scaffold border), Nitab4.5_0006128 (3'end only , in two exact copies), Nitab4.5_0430594 (exon 1 only, scaffold border) |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGTTAATTAA GTCAATTTCC AAGGAAAGTT GATATATTAA CACATATAAA AACTGTTTCT TTTCTATTCT TGTTTCCTCT TTTTTTCTAC TTATAGGCAA TTAATGGTAA ATAATTAAAG
GAAAAAAAAG ACGTCAAGCT AAGGTGGTAG TTGTGGAGTC CTTCAAAGGT CAGACAATAT TATCTCAAGA ATATTTCAAC TATACAGTTG GTATATTACA TGCATTCATG TTTCATTTTT
GTAACATATA CAAACAGTTC CATCTGTAAT TATAGACTAT TTCAATTAAT TTCTCAAACT ATAAATACTC CAATGTGTTC ATAAGTTATA TCCATCACTT AAGGAAAGCC AATTACTAAG
AAAAATTCAT AGTGCCTAGC TGCTATTGAG TCTTAAAAAG ATGGATTCCA AGAGCTTCAA CCTTTCTGTT TTAGCACTTT TAGCTTGCCT GATTTTATCT TTTTCAGTAC CATCTCTTGC
CTATGGGAAG AAAACAACAT GGCCACCACT TAGAGTAGGT TTCTACAGAT ATAGATATAG ATGTCCTCCT GCTGAAGAAA TTGTGAAAAA TGTTGTATAC AAAGCCGTAT CGCGTAATCC
AGGCATTGCT GCTGGCCTTA TCAGGCTACA TTTTCACGAC TGCTTCGTCA GGGTAATTTT TCAGTTTATG AGTTCTGAAT TCTAGAAAAG GCAGTTTACT GGATTCTGGA TAAGTTATTT
ATGCATATAT GGACACAGAG TTTTGGCCAA AATTACTGGA ATCTACCGAA CATGTAGCTA GAACTCTGAT ATCTGTGCTG ATTTATACCA TATGCGTATG CTGTGTTTAT ATTTTCGTTG
ATAATTGCAC TACTTATAAT TGTGTGTTGT TTATGTAATT AGGGGTGTGA TGCATCAGTA CTATTGGATG GACCAAACTC AGAGAAGGAA GGTGTTCCCA ACAAGAATAG TTTACGAGGT
TTCGAGGTTG TTGATGCAGC AAAAGCACAA CTTGAGGATG CATGCCCCGG AACTGTATCC TGTGCTGACA TTCTTGCCTT TGCTGCTCGG GACAGTTCCT ATAAAGTTGG GAATATATAC
TATGATGTCG AAGCTGGACG TCGTGATGGT AGAGTTTCCA TTGACTCTGA AACATTGGCC AATCTTCCTT CTCCATTTGT CGACGCCAAG GAACTCATCA AGAACTTTGC CAGAAAAGGT
ATGTCCGCTG ATGAAATGGT GACCCTATCT GGCGCGCATT CCATTGGCAT TGCTCACTGC GCTGTTTTCG CTAATCGCCT TTACCCTCAA AACAACCAAC AAAATCTGCC AATTTATCCT
GAATACGCCA ACTTCTTGAA GTCCATTTGC CCACCAGAGG CACTCACAAA CGGGACAGGA GTCACGAACC CTGCAAATCT TGATGTCCTG ACACCAAACA GGTTGGATAA CAAATACTAC
GCTGCGTTAA AGAGTAAAAA GGGGCTGTTG ATTTCTGATC AGGGGTTGCT GGCCAATCCT ACAACTGCTA AAATGGTGAA CTTCAATGCA AGATATGGTT CAGTTTGGGC CAAGAAATTT
GCAGCTGCAA TGATTCACAT GGGTCAA
|
Retrieve as FASTA
|
|