The peroxidases and oxidases database
Entry information : NtAPx04-1B (NtAPx04b)
Entry ID 8287
Creation 2011-04-14 (Christophe Dunand)
Last sequence changes 2011-04-14 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-04-14 (Christophe Dunand)
Peroxidase information: NtAPx04-1B (NtAPx04b)
Name (synonym) NtAPx04-1B (NtAPx04b)
Class Ascorbate peroxidase     [Orthogroup: APx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtAPx04-1B
start..stop		 S start..stop
NtAPx04-1A 482 1e-175 1..247 1..244
LeAPx04 482 1e-175 1..247 1..244
CanAPx04 479 8e-175 1..245 1..242
StAPx03 478 4e-174 1..247 1..244
Literature and cross-references NtAPx04-1B (NtAPx04b)
Protein sequence: NtAPx04-1B (NtAPx04b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   247 (294)
PWM (Da):   %s   26868.76 (31096.1)  
PI (pH):   %s   6.79 (6.65) Peptide Signal:   %s   cut: 26 range:26-319
Sequence 0
Send to BLAST
Send to Peroxiscan
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MGKCYPRVSE EYVKAVEKCK RKLRGLIAEK NCAPIILRLA WHSAGTYDVK TKTGGPFGTI RHPDELKHGA NNGLDIAVRL LEPIKEQFPV LSYADFYQLA GVVAVKVTGG PDIPFHPGRQ  DKTEPPPEGR LPDATKGSDH LREVFGHMGL SDKDIVALSG GHTLxxxGRC HKERSGFEGA WTNNPLIFDN SYFKELLSGE KEGLLQLPSD KALLEDPVFR PLVEKYAADE DAFFSDYAEA 
HLKLSDL 

Retrieve as FASTA  
Remarks Partial sequence from EST. Short 3' end is missing. Frame shift in the contig (after VALSGGHTL).
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTTTCATAAT GATTGGTTTT TGTACAGTAA TATATTTGAA TTTGATTGAG CTTAAGCTGA TTTAATGTTA CTAATTTTGG TATTTGTAGT TGGGAAATCT TCTGTGATCG GGAATAATGG  GGAAATGCTA TCCGAGAGTG AGCGAAGAGT ATGTAAAAGC AGTAGAGAAA TGTAAGAGAA AGCTTAGAGG ACTCATTGCT GAGAAAAATT GTGCTCCTAT TATCCTCCGA TTGGCATGGC  ATTCAGCAGG GACATATGAT GTCAAAACCA AAACTGGAGG TCCATTTGGG ACAATCAGGC ACCCTGATGA ACTTAAACAT GGAGCCAACA ATGGTCTTGA CATTGCTGTT CGACTTTTGG  AGCCAATTAA GGAGCAATTT CCAGTCTTAT CCTATGCCGA CTTTTATCAG TTGGCTGGCG TAGTGGCGGT TAAAGTTACG GGAGGCCCTG ATATTCCTTT TCACCCAGGG AGACAGGACA  AGACAGAACC ACCTCCAGAA GGCCGCTTGC CTGATGCCAC AAAAGGCTCA GACCATCTGA GAGAGGTTTT CGGGCACATG GGGCTGAGTG ATAAAGACAT TGTTGCTTTA TCTGGTGGTC  ACACTCTGGA AGGTGCCACA AAGAACGGTC AGGATTTGAG GGAGCATGGA CTAACAACCC TCTCATATTT GATAATTCAT ATTTCAAGGA ACTCCTGAGT GGAGAGAAAG AAGGTCTTCT  CCAGCTACCA TCAGACAAAG CACTTCTAGA AGATCCAGTC TTCCGCCCTC TCGTCGAGAA ATACGCTGCA GATGAAGATG CCTTCTTTTC TGACTATGCT GAAGCTCATT TAAAGCTCTC 
GGATCTC 

Retrieve as FASTA