Entry information : NtPrx62-1B(Nitab4.5_0015205 / Nitab4.5_0047852)
Entry ID 8294
Creation 2011-04-14 (Christophe Dunand)
Last sequence changes 2011-04-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2022-10-05 (Christophe Dunand)
Peroxidase information: NtPrx62-1B(Nitab4.5_0015205 / Nitab4.5_0047852)
Name NtPrx62-1B(Nitab4.5_0015205 / Nitab4.5_0047852)
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx62-1B
start..stop
S start..stop
NtPrx62-1A 641 0 1..324 1..324
NtPrx12-1A 635 0 1..324 1..324
LePrx04 588 0 1..324 1..322
NtPrx77-1A 563 0 1..324 1..324
Literature and cross-references NtPrx62-1B(Nitab4.5_0015205 / Nitab4.5_0047852)
EST ref. GenBank:   AM802756.1 [3' end]
Protein sequence: NtPrx62-1B(Nitab4.5_0015205 / Nitab4.5_0047852)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (301)
PWM (Da):   %s   35212.04 (32695.6)  
PI (pH):   %s   8.77 (8.72) Peptide Signal:   %s   cut: 24 range:24-324
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MATFKFLTFL ILQIFCILKG ANSQGVEVGF YKKTCPNVEA IVKQTTAHYI SRAPTLAAPL LRMHFHDCFV RGCDGSVLLN STKGNQAEKD AIPNQSLRGF QVIDAAKSAL EQECPGIVSC  SDILALAARD AVELINGPTW AVPLGRRDGR VSILLDALKN LPTPFDNFTT LKTTFGSLGL NVKDLAVLSG GHTIGMSHCL SFGSRLYNFT GKGDTDPNMD QNYIGRLKIK CKPGDVTTIV 
EMDPGSFKSF DTDYYTMVSK RRGLFASDAA LLTDSQTKSY VLSQLNPYTS TFFKDFGESM IKMGKIGVLT GKAGEIRKHC ALRN 

Retrieve as FASTA  
Remarks Complete sequence from 1 EST and GSS (3 introns). No prediction from SGN. DNA found in Nitab4.5_0015205 (exons 1 (frame shift), 2 and 3) and Nitab4.5_0047852 (exon 4). Probably also in Nitab4.5_0012069g0010 (last exon, NN before and fused ORF)
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGAACTACAT AGGTCGTTTG AAGATCAAAT GCAAGCCAGA AGATGTGACC ACCATCGTCG AAATGGACCC TGGAAGTTTT AAGAGTTTCG ACACTGACTA TTACACCATG GTTAGCAAAA  GAAGAGGGTT GTTCGCATCT GATGCAGCCC TTCTTACTGA TAGTCAAACA AAAGCTTATG TCTTGTCCCA GCTAAATCCC TATGCATCCA CTTTCTTCAA GGATTTTGGA GAATCAATGA  TAAAGATGGG CAAAATTGGC GTCCTTACTG GGAAAGCAGG CGAAATCAGA AAACACTGCG CCTTTAGAAA CTAAAGGAAT TTTTATAAGC TATTTCCCTT GCAAAATTCT AGTCATTTCG  TACTGTTATC CTTAACGGAG TTTCTGTTGT GAGTACTCAT TTTTCTATTT TGAATAGCTT ATATGTAAGG TGTGTCTTTT TGGTGGTAAA CTTATTGTGT TGTAAGTTTG TAATTCAGTT 
CATTAAGACA TGAAGCTAAT AAAAATGTTG CTTTAATT 

Retrieve as FASTA