Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
676 |
PWM (Da): |
70919.35 |
|
PI (pH):
| 6.82 |
|
Sequence 819
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MQAAASTAPAILAAARRHAPARKRGCRQRSRAACVVIRAAPGPLFDVTAAPGAGRVDWHAVKSDLLDLFSRSQSVWPADYGTYAPFFVRLAWHNSGSYRVADGRGGAEGGRQRFDPERSWQDNTNLDKARNLLAPLKLKHGPALSWGDLFILSGTVAIEAMGGPVLGFCGGRIDDQDGSDSLALGPSPEQRAFHPCPVNGNCTPPLGAVAVGETKSLIYVDPEGHMVPDPVRSAADVRWTFAGMAMNDTETVALIGGGHAFGKTHGACPAGAGALPRDDPANPWPGLCGSGRAADAFTSGIEGPWTTRPTRWDNEYFHNVLRAGLAAGEEPLLAPSAFPEQTSAPTQRVVMMTSDLALAYDPSFRAAAAFASSPAALDSAFAAAWYKLVTRDMGPHARCVGPWVPPPQPFQFPLPKPPPEPVDYAEVWAALHKGADPLLPAADAAALAYGCAASYRYTDNQGGCDGARIRFSPEVDFPANAGALEAIGKLRGVKKAFGARLSWADLITLAGHAAVAPHSGPMPFCGGRTDATDGAGSRWLQPLSAPSSAAYFKEHPTGLTAREVLAVWAAASRAVAATRRPPADFFRWVALATPTEVAEMPADLRVVHDDAELREAALDFASDPAAHKALLAKAWPRLMSLGRFDGPASSPCDDPAATLMLPPTDAPAPRASSH* |
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic (5 introns) and 3 ESTs. Incorrect prediction from JGI. Also detected in scafold_829 |
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCAAGCTGCCGCCTCCACCGCACCAGCGATACTGGCCGCGGCTCGCCGCCACGCGCCGGCTCGGAAGAGGGGCTGTCGGCAGCGCAGCAGAGCGGCATGCGTCGTCATTCGAGCAGCA CCAGGTCCCCTCTTCGACGTGACGGCCGCTCCCGGAGCCGGCCGGTGCGCGCCCGACCCACGCCCCCTCTCGCACCCCCCCGATCCCCCTGCGCGGCGCCCCCTCCACTGCGCGCCGGCT CGAGCGCCTATTGCCAAATCGCGACTTTCGAGCGCAGTGCGTGCGCCCCACACGTCACGCGAGCGCAGGAGAGTTTGCGGCAGAGCAGTACCGTGTACTAGCCGGAGGCATCGCGCCGAA AACCCCGCGCATTCCGCCCCAACAGAGGCTGCAGGAGGCAGATGGCCAATAGCGACGATCGTTACGAAATGTTGCGGGACCGGGAGCTCTCCAAGCTGTCTTGGGTGGTCAAAGAATTTT TCCCCGTATCGGACCGAAGGTCCTCTTCAGTGTGGAAGAAGCGACAAGGGAAAGAACGACGAGAAGGGGGCGACCGCGAGGTGGCATGAAGGTCGCAGCGAGAATCGGCGAGAGACTGCG AAGGCGTATAAGGACAACCCGGACCCAAGACGCACAAGCTTTGTTATTATTGTTAGTTAGTTAGGAAGGTGAAGAACACAGCGGACTGGGGGTGGACGCGAGAAGCTTGAGAGGCCTTCC CGAGAAATCGCGCGCGCCGCGAAGGCACTCGGAACACTGAACGACCACCCCCATTCATGCTCCCTCTACTCTCGCCCGTCGCCGCCTCGCTTTTGTATCGCCTCCCTCGACGGCACGCCT CTCCCGCTCAACCACCCACCGCTGCGCTCTCGTCCGCCGGCGGACGCGGCGAGTGTGGACTGGCACGCCGTCAAGAGCGACCTGCTCGACCTCTTCTCGCGCTCTCAGTCCGTCTGGCCG GCGGACTACGGCACCTACGCTCCCTTTTTTGTGCGCCTCGCTTGGCACAATAGTGGCAGCTACCGCGTCGCCGATGGGCGCGGCGGCGCCGAGGGCGGCCGGCAGCGCTTCGACCCTGAG CGCTCTTGGCAGGACAACACCAATTTGGATAAGGCGAGGAACCTGCTCGCCCCGCTCAAGCTCAAGCACGGCCCCGCGCTGTCCTGGGGCGACTTGTTCATCCTCTCTGGCACCGTCGCG ATCGAGGCGATGGGCGGGCCCGTCCTCGGCTTTTGCGGCGGCAGGATCGATGACCAGGACGGCTCCGACTCCCTCGCGCTCGGCCCTTCGCCCGAGCAGCGAGCCTTCCACCCGTGCCCC GTCAACGGCAACTGCACGCCGCCGCTCGGCGCGGTTGCCGTGGGCGAAACTAAGAGCCTGATCTACGTCGACCCGGAGGGCCACATGGGGGTGAGCTCTTGCCATGCTAGCTCTTGCCAT GCTAGCTGTGTCACCTTGGAGCCGTCATGGACACGCTGCCCCTTCGCACTCGCTGCCCCTCCCGACTCGCTGCTCCTCCGACACCGCCTCAAATCCCGCCCGACACCGCCTCGAATCCCG CCTCCAGGTGCCGGACCCGGTCCGGTCGGCGGCCGACGTGCGATGGACCTTTGCGGGCATGGCCATGAACGACACAGAGACGGTTGCGCTCATCGGCGGCGGGCACGCGTTTGGCAAGAC GCACGGAGCGTGCCCTGCCGGCGCGGGCGCTCTCCCGCGCGACGACCCGGCCAACCCGTGGCCGGGCCTCTGCGGCTCTGGCCGCGCCGCCGACGCCTTCACCTCGGGCATCGAGGGCCC GTGGACCACGCGGCCAACGCGGTGGGACAACGAGTACTTCCACAACGTGCTGCGTGCTGGGTGGGAGAAGCACCGCGGGCCGGGAGGCGCGTGGCAGTGGAGGAGCGCGCCGCCTGGCGA GGACCCTCCCCGCTCGCCTGGCCCTCGGCTCCTCTCGGCTCACCTCCACGCGGTTGTGCCATCTCGGCAGGCTCGCGGCAGGAGAGGAGCCGCTGCTTGCCCCGTCCGCCTTCCCGGAGC AGACCAGCGCGCCGACCCAGCGCGTGGTGATGATGACGTCGGATTTGGCCCTGGCGTATGACCCGTCCTTCCGCGCCGCCGCCGAGGCGTCTCGCCGCGAGCCCGAGGGTCCGAGATCAC ACACTAATGGGTACGCTGCACACCCGAGAGATCGCTCGAGACTAGGCGTTCGCCTCGAGCCCCGCGGCTCTCGACAGCGCCTTTGCGGCGGCCTGGTACAAGCTGGTGACGCGGGACATG GGGCCGCACGCGCGCTGTGTCGGGCCATGGGTGCCACCCCCGCAGCCTTTCCAGTTCCCGCTGCCCAAGCCGCCGCCGGAGCCGGTCGATTATGCGGAGGTCTGGGCAGCATTGCACAAA GGCGCGGACCCGCTCCTGCCGGCTGCCGACGCGGCCGCGCTCGCGTACGGTTGCGCGGCCTCGTATCGGTACACAGACAACCAGGGCGGCTGCGACGGCGCTCGCATCCGCTTCTCCCCC GAGGTCGACTTTCCTGCGAACGCTGGCGCACTGGAGGCGATTGGCAAGCTTCGCGGCGTCAAGAAGGCGTTCGGTGCGCGCCTCTCGTGGGCCGATCTCATCACCCTCGCGGGACACGCC GCCGTCGCGCCTCACTCGGGTCCGATGCCGTTTTGCGGCGGCCGCACCGACGCAACCGACGGCGCGGGCTCGCGCTGGCTTCAGCCGCTGTCGGCGCCGTCGTCGGCCGCCTACTTCAAG GAGCACCCGACGGGCCTCACCGCCAGGGAGGTGCTCGCTGTGTGGGCGGCAGCAAGCCGCGCGGTGGCGGCGACGCGCCGGCCGCCGGCCGATTTCTTCCGGTGGGTGGCCCTCGCTACG CCCACCGAGGTGCGCGCGGCCTGGTGGCCCCCGTCACGCACCCCCCGTCACCGCCCGTTTTTCCCTCGCCCGCCCCCCCCCCCCCCTTCACCGCCCACTCCTCCCTCGCCAGGTGGCAGA GATGCCCGCCGATCTGCGCGTGGTCCACGACGACGCGGAGCTGCGCGAGGCGGCCCTCGACTTCGCCTCCGACCCGGCCGCGCACAAGGCTCTGCTCGCGAAGGCGTGGCCGCGACTGAT GTCTCTTGGCCGATTCGACGGCCCCGCCTCCAGCCCGTGCGACGACCCTGCGGCGACTCTGATGCTTCCGCCGACCGACGCGCCCGCGCCGCGCGCCTCATCCCACTAA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCAAGCTGCCGCCTCCACCGCACCAGCGATACTGGCCGCGGCTCGCCGCCACGCGCCGGCTCGGAAGAGGGGCTGTCGGCAGCGCAGCAGAGCGGCATGCGTCGTCATTCGAGCAGCA CCAGGTCCCCTCTTCGACGTGACGGCCGCTCCCGGAGCCGGCCGTGTGGACTGGCACGCCGTCAAGAGCGACCTGCTCGACCTCTTCTCGCGCTCTCAGTCCGTCTGGCCGGCGGACTAC GGCACCTACGCTCCCTTTTTTGTGCGCCTCGCTTGGCACAATAGTGGCAGCTACCGCGTCGCCGATGGGCGCGGCGGCGCCGAGGGCGGCCGGCAGCGCTTCGACCCTGAGCGCTCTTGG CAGGACAACACCAATTTGGATAAGGCGAGGAACCTGCTCGCCCCGCTCAAGCTCAAGCACGGCCCCGCGCTGTCCTGGGGCGACTTGTTCATCCTCTCTGGCACCGTCGCGATCGAGGCG ATGGGCGGGCCCGTCCTCGGCTTTTGCGGCGGCAGGATCGATGACCAGGACGGCTCCGACTCCCTCGCGCTCGGCCCTTCGCCCGAGCAGCGAGCCTTCCACCCGTGCCCCGTCAACGGC AACTGCACGCCGCCGCTCGGCGCGGTTGCCGTGGGCGAAACTAAGAGCCTGATCTACGTCGACCCGGAGGGCCACATGGGGGTGCCGGACCCGGTCCGGTCGGCGGCCGACGTGCGATGG ACCTTTGCGGGCATGGCCATGAACGACACAGAGACGGTTGCGCTCATCGGCGGCGGGCACGCGTTTGGCAAGACGCACGGAGCGTGCCCTGCCGGCGCGGGCGCTCTCCCGCGCGACGAC CCGGCCAACCCGTGGCCGGGCCTCTGCGGCTCTGGCCGCGCCGCCGACGCCTTCACCTCGGGCATCGAGGGCCCGTGGACCACGCGGCCAACGCGGTGGGACAACGAGTACTTCCACAAC GTGCTGCGTGCTGGGCTCGCGGCAGGAGAGGAGCCGCTGCTTGCCCCGTCCGCCTTCCCGGAGCAGACCAGCGCGCCGACCCAGCGCGTGGTGATGATGACGTCGGATTTGGCCCTGGCG TATGACCCGTCCTTCCGCGCCGCCGCCGAGGCGTTCGCCTCGAGCCCCGCGGCTCTCGACAGCGCCTTTGCGGCGGCCTGGTACAAGCTGGTGACGCGGGACATGGGGCCGCACGCGCGC TGTGTCGGGCCATGGGTGCCACCCCCGCAGCCTTTCCAGTTCCCGCTGCCCAAGCCGCCGCCGGAGCCGGTCGATTATGCGGAGGTCTGGGCAGCATTGCACAAAGGCGCGGACCCGCTC CTGCCGGCTGCCGACGCGGCCGCGCTCGCGTACGGTTGCGCGGCCTCGTATCGGTACACAGACAACCAGGGCGGCTGCGACGGCGCTCGCATCCGCTTCTCCCCCGAGGTCGACTTTCCT GCGAACGCTGGCGCACTGGAGGCGATTGGCAAGCTTCGCGGCGTCAAGAAGGCGTTCGGTGCGCGCCTCTCGTGGGCCGATCTCATCACCCTCGCGGGACACGCCGCCGTCGCGCCTCAC TCGGGTCCGATGCCGTTTTGCGGCGGCCGCACCGACGCAACCGACGGCGCGGGCTCGCGCTGGCTTCAGCCGCTGTCGGCGCCGTCGTCGGCCGCCTACTTCAAGGAGCACCCGACGGGC CTCACCGCCAGGGAGGTGCTCGCTGTGTGGGCGGCAGCAAGCCGCGCGGTGGCGGCGACGCGCCGGCCGCCGGCCGATTTCTTCCGGTGGGTGGCCCTCGCTACGCCCACCGAGGTGGCA GAGATGCCCGCCGATCTGCGCGTGGTCCACGACGACGCGGAGCTGCGCGAGGCGGCCCTCGACTTCGCCTCCGACCCGGCCGCGCACAAGGCTCTGCTCGCGAAGGCGTGGCCGCGACTG ATGTCTCTTGGCCGATTCGACGGCCCCGCCTCCAGCCCGTGCGACGACCCTGCGGCGACTCTGATGCTTCCGCCGACCGACGCGCCCGCGCCGCGCGCCTCATCCCACTAA |
Retrieve as FASTA
|
|