RedOxiBase: View Perox 8393

Entry information : EhuxCP01

Entry ID	8393
Creation	2011-05-17 (Christophe Dunand)
Last sequence changes	2011-05-17 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2015-08-04 (Christophe Dunand)

Peroxidase information: EhuxCP01

Name

EhuxCP01

Class

Catalase peroxidase [Orthogroup: CP002]

Taxonomy

Eukaryota Noelaerhabdaceae Emiliania

Organism

Emiliania huxleyi [TaxId: 2903 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EhuxCP01 start..stop	S start..stop
BnaCP	520	2e-176	55..655	66..766
PcapCP02	497	3e-168	46..647	44..683
PsojCP03	494	2e-167	38..647	39..683
PsojCP	491	4e-166	56..646	54..682

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	191662..191825	164	N° 2	192555..193071	517	N° 3	193229..193521	293	N° 4	193652..193787	136
N° 5	193867..194550	684	N° 6	194654..194890	237
join(191662..191825,192555..193071,193229..193521,193652..193787,193867..194550, 194654..194890)

Literature and cross-references EhuxCP01

DNA ref.	JGI genome: scaffold_41 (191662..194890)
EST ref.	GenBank: GE184550.1 [3' end]

Protein sequence: EhuxCP01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	676
PWM (Da):	70919.35
PI (pH):	6.82

Sequence 819
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MQAAASTAPAILAAARRHAPARKRGCRQRSRAACVVIRAAPGPLFDVTAAPGAGRVDWHAVKSDLLDLFSRSQSVWPADYGTYAPFFVRLAWHNSGSYRVADGRGGAEGGRQRFDPERSWQDNTNLDKARNLLAPLKLKHGPALSWGDLFILSGTVAIEAMGGPVLGFCGGRIDDQDGSDSLALGPSPEQRAFHPCPVNGNCTPPLGAVAVGETKSLIYVDPEGHMVPDPVRSAADVRWTFAGMAMNDTETVALIGGGHAFGKTHGACPAGAGALPRDDPANPWPGLCGSGRAADAFTSGIEGPWTTRPTRWDNEYFHNVLRAGLAAGEEPLLAPSAFPEQTSAPTQRVVMMTSDLALAYDPSFRAAAAFASSPAALDSAFAAAWYKLVTRDMGPHARCVGPWVPPPQPFQFPLPKPPPEPVDYAEVWAALHKGADPLLPAADAAALAYGCAASYRYTDNQGGCDGARIRFSPEVDFPANAGALEAIGKLRGVKKAFGARLSWADLITLAGHAAVAPHSGPMPFCGGRTDATDGAGSRWLQPLSAPSSAAYFKEHPTGLTAREVLAVWAAASRAVAATRRPPADFFRWVALATPTEVAEMPADLRVVHDDAELREAALDFASDPAAHKALLAKAWPRLMSLGRFDGPASSPCDDPAATLMLPPTDAPAPRASSH*

Retrieve as FASTA

Remarks

Complete sequence from genomic (5 introns) and 3 ESTs. Incorrect prediction from JGI. Also detected in scafold_829

DNA ►
Send to BLAST

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ATGCAAGCTGCCGCCTCCACCGCACCAGCGATACTGGCCGCGGCTCGCCGCCACGCGCCGGCTCGGAAGAGGGGCTGTCGGCAGCGCAGCAGAGCGGCATGCGTCGTCATTCGAGCAGCA
CCAGGTCCCCTCTTCGACGTGACGGCCGCTCCCGGAGCCGGCCGGTGCGCGCCCGACCCACGCCCCCTCTCGCACCCCCCCGATCCCCCTGCGCGGCGCCCCCTCCACTGCGCGCCGGCT
CGAGCGCCTATTGCCAAATCGCGACTTTCGAGCGCAGTGCGTGCGCCCCACACGTCACGCGAGCGCAGGAGAGTTTGCGGCAGAGCAGTACCGTGTACTAGCCGGAGGCATCGCGCCGAA
AACCCCGCGCATTCCGCCCCAACAGAGGCTGCAGGAGGCAGATGGCCAATAGCGACGATCGTTACGAAATGTTGCGGGACCGGGAGCTCTCCAAGCTGTCTTGGGTGGTCAAAGAATTTT
TCCCCGTATCGGACCGAAGGTCCTCTTCAGTGTGGAAGAAGCGACAAGGGAAAGAACGACGAGAAGGGGGCGACCGCGAGGTGGCATGAAGGTCGCAGCGAGAATCGGCGAGAGACTGCG
AAGGCGTATAAGGACAACCCGGACCCAAGACGCACAAGCTTTGTTATTATTGTTAGTTAGTTAGGAAGGTGAAGAACACAGCGGACTGGGGGTGGACGCGAGAAGCTTGAGAGGCCTTCC
CGAGAAATCGCGCGCGCCGCGAAGGCACTCGGAACACTGAACGACCACCCCCATTCATGCTCCCTCTACTCTCGCCCGTCGCCGCCTCGCTTTTGTATCGCCTCCCTCGACGGCACGCCT
CTCCCGCTCAACCACCCACCGCTGCGCTCTCGTCCGCCGGCGGACGCGGCGAGTGTGGACTGGCACGCCGTCAAGAGCGACCTGCTCGACCTCTTCTCGCGCTCTCAGTCCGTCTGGCCG
GCGGACTACGGCACCTACGCTCCCTTTTTTGTGCGCCTCGCTTGGCACAATAGTGGCAGCTACCGCGTCGCCGATGGGCGCGGCGGCGCCGAGGGCGGCCGGCAGCGCTTCGACCCTGAG
CGCTCTTGGCAGGACAACACCAATTTGGATAAGGCGAGGAACCTGCTCGCCCCGCTCAAGCTCAAGCACGGCCCCGCGCTGTCCTGGGGCGACTTGTTCATCCTCTCTGGCACCGTCGCG
ATCGAGGCGATGGGCGGGCCCGTCCTCGGCTTTTGCGGCGGCAGGATCGATGACCAGGACGGCTCCGACTCCCTCGCGCTCGGCCCTTCGCCCGAGCAGCGAGCCTTCCACCCGTGCCCC
GTCAACGGCAACTGCACGCCGCCGCTCGGCGCGGTTGCCGTGGGCGAAACTAAGAGCCTGATCTACGTCGACCCGGAGGGCCACATGGGGGTGAGCTCTTGCCATGCTAGCTCTTGCCAT
GCTAGCTGTGTCACCTTGGAGCCGTCATGGACACGCTGCCCCTTCGCACTCGCTGCCCCTCCCGACTCGCTGCTCCTCCGACACCGCCTCAAATCCCGCCCGACACCGCCTCGAATCCCG
CCTCCAGGTGCCGGACCCGGTCCGGTCGGCGGCCGACGTGCGATGGACCTTTGCGGGCATGGCCATGAACGACACAGAGACGGTTGCGCTCATCGGCGGCGGGCACGCGTTTGGCAAGAC
GCACGGAGCGTGCCCTGCCGGCGCGGGCGCTCTCCCGCGCGACGACCCGGCCAACCCGTGGCCGGGCCTCTGCGGCTCTGGCCGCGCCGCCGACGCCTTCACCTCGGGCATCGAGGGCCC
GTGGACCACGCGGCCAACGCGGTGGGACAACGAGTACTTCCACAACGTGCTGCGTGCTGGGTGGGAGAAGCACCGCGGGCCGGGAGGCGCGTGGCAGTGGAGGAGCGCGCCGCCTGGCGA
GGACCCTCCCCGCTCGCCTGGCCCTCGGCTCCTCTCGGCTCACCTCCACGCGGTTGTGCCATCTCGGCAGGCTCGCGGCAGGAGAGGAGCCGCTGCTTGCCCCGTCCGCCTTCCCGGAGC
AGACCAGCGCGCCGACCCAGCGCGTGGTGATGATGACGTCGGATTTGGCCCTGGCGTATGACCCGTCCTTCCGCGCCGCCGCCGAGGCGTCTCGCCGCGAGCCCGAGGGTCCGAGATCAC
ACACTAATGGGTACGCTGCACACCCGAGAGATCGCTCGAGACTAGGCGTTCGCCTCGAGCCCCGCGGCTCTCGACAGCGCCTTTGCGGCGGCCTGGTACAAGCTGGTGACGCGGGACATG
GGGCCGCACGCGCGCTGTGTCGGGCCATGGGTGCCACCCCCGCAGCCTTTCCAGTTCCCGCTGCCCAAGCCGCCGCCGGAGCCGGTCGATTATGCGGAGGTCTGGGCAGCATTGCACAAA
GGCGCGGACCCGCTCCTGCCGGCTGCCGACGCGGCCGCGCTCGCGTACGGTTGCGCGGCCTCGTATCGGTACACAGACAACCAGGGCGGCTGCGACGGCGCTCGCATCCGCTTCTCCCCC
GAGGTCGACTTTCCTGCGAACGCTGGCGCACTGGAGGCGATTGGCAAGCTTCGCGGCGTCAAGAAGGCGTTCGGTGCGCGCCTCTCGTGGGCCGATCTCATCACCCTCGCGGGACACGCC
GCCGTCGCGCCTCACTCGGGTCCGATGCCGTTTTGCGGCGGCCGCACCGACGCAACCGACGGCGCGGGCTCGCGCTGGCTTCAGCCGCTGTCGGCGCCGTCGTCGGCCGCCTACTTCAAG
GAGCACCCGACGGGCCTCACCGCCAGGGAGGTGCTCGCTGTGTGGGCGGCAGCAAGCCGCGCGGTGGCGGCGACGCGCCGGCCGCCGGCCGATTTCTTCCGGTGGGTGGCCCTCGCTACG
CCCACCGAGGTGCGCGCGGCCTGGTGGCCCCCGTCACGCACCCCCCGTCACCGCCCGTTTTTCCCTCGCCCGCCCCCCCCCCCCCCTTCACCGCCCACTCCTCCCTCGCCAGGTGGCAGA
GATGCCCGCCGATCTGCGCGTGGTCCACGACGACGCGGAGCTGCGCGAGGCGGCCCTCGACTTCGCCTCCGACCCGGCCGCGCACAAGGCTCTGCTCGCGAAGGCGTGGCCGCGACTGAT
GTCTCTTGGCCGATTCGACGGCCCCGCCTCCAGCCCGTGCGACGACCCTGCGGCGACTCTGATGCTTCCGCCGACCGACGCGCCCGCGCCGCGCGCCTCATCCCACTAA

Retrieve as FASTA

CDS►
Send to BLAST

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Retrieve as FASTA