Entry information : KraKat01
Entry ID 8412
Creation 2011-05-30 (Marcel Zamocky)
Last sequence changes 2011-05-30 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-05-31 (Christophe Dunand)
Peroxidase information: KraKat01
Name KraKat01
Class Catalase    [Orthogroup: Kat001]
Taxonomy Bacteria Ktedonobacteria Ktedonobacteraceae Ktedonobacter
Organism Ktedonobacter racemifer    [TaxId: 363277 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value KraKat01
start..stop
S start..stop
BsKat01_TE124 668 0 9..485 6..479
BsKat01_168 662 0 9..485 6..479
PpalKat01 661 0 8..485 5..484
BsKat01_LEV006 655 0 9..483 6..477
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..1464 1464  
complement(join(1..1464))


exon

Literature and cross-references KraKat01
Literature Lucas S. et al. The permanent draft genome of Ktedonobacter racemifer. (unpublished since 2010).
Protein ref. UniProtKB:   D6TVB8
DNA ref. GenBank:   ADVG01000003.1 (1351014..1352477)
Protein sequence: KraKat01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   487
PWM (Da):   %s   54859.18  
PI (pH):   %s   6.3
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTEQDKRFLT TDFGIPAPDN TNSLTVGYPG PTLLEDFHLV EKLAHFNRER IPERIVHAKG AGAHGYFEVT HDVSQYTKAA FLNTVGKQTP AFVRFSTVGG EKGSADSARD PRGFAIKFYT  EEGNYDLVGN NTPVFFLRDA IKFPDFIHTQ KRNPQTNAKD PDAFWDFISL TPEALHQVTI LFSSRGTPKT YRHMDGFGSH TFKWINAEGK AVWVKYHFKT EAGIENWTDA EATHMAGANP  DFATLDLFEH IENGKEAAWT CSVQIMPVEE AAKYRFDPFD VTKVWLHSDY PLIPIGRLVL NRNPENYFAE VEQAAFAPTN IVPGIGFSPD KMLQGRIFAY PDAHRYRVGT NYAHLPINRP  QVEINNYRRD GAMRFDGNGG ATPNYQPNSF DGPNAAPEFY RGDHQDAFSG NAERLAYELK DDDFAQPGAL YRLMSEEEKT HLVNNLVGHM RNVKSKEIVE RQLKHFFRAD PEYGQRVAAG 
LGLEVTA 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="DSM 44963". Clade 3 catalase with NADPH binding.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTAGGCGGTC ACTTCCAGGC CCAGGCCGGC GGCGACGCGC TGGCCGTACT CGGGATCGGC GCGGAAGAAA TGCTTCAACT GACGCTCGAC GATCTCCTTG CTCTTGACGT TGCGCATATG  ACCGACCAGG TTATTGACCA GGTGGGTCTT CTCTTCCTCG CTCATCAAGC GATAGAGCGC GCCCGGCTGC GCGAAGTCAT CATCCTTCAG CTCATAGGCG AGGCGCTCAG CGTTGCCGCT  GAAGGCATCC TGATGGTCGC CGCGATAGAA CTCGGGGGCT GCATTAGGAC CATCGAAGCT GTTCGGCTGA TAGTTGGGGG TCGCGCCACC ATTGCCATCG AAGCGCATGG CGCCGTCGCG  GCGATAGTTG TTGATCTCAA CCTGGGGACG GTTAATGGGC AGGTGCGCGT AGTTGGTGCC GACGCGATAG CGATGGGCAT CTGGATAGGC GAAGATGCGG CCCTGGAGCA TCTTGTCAGG  CGAGAAGCCG ATGCCGGGAA CGATGTTCGT CGGCGCGAAG GCGGCCTGCT CGACCTCGGC GAAGTAGTTC TCCGGGTTGC GGTTCAGCAC CAGGCGACCA ATCGGGATCA GGGGATAATC  GCTATGCAGC CAGACCTTGG TCACATCGAA GGGATCGAAG CGGTACTTCG CCGCCTCTTC CACGGGCATG ATCTGTACAG AGCAGGTCCA GGCGGCCTCT TTCCCGTTCT CGATATGCTC  GAAGAGGTCC AGGGTCGCGA AATCAGGATT GGCGCCCGCC ATGTGCGTGG CCTCGGCGTC GGTCCAGTTC TCGATGCCAG CCTCAGTCTT GAAGTGGTAC TTGACCCAGA CCGCTTTGCC  CTCGGCATTG ATCCACTTGA AGGTGTGCGA GCCAAAGCCA TCCATATGGC GGTAGGTCTT GGGTGTGCCA CGGCTGGAGA AGAGGATCGT GACCTGATGC AGCGCCTCCG GTGTCAGCGA  GATAAAGTCC CAGAAGGCGT CAGGATCCTT GGCGTTGGTC TGTGGATTGC GCTTCTGTGT GTGAATAAAG TCAGGGAATT TGATGGCGTC GCGCAGGAAG AAGACGGGCG TATTGTTACC  AACGAGATCG TAGTTGCCCT CTTCCGTGTA GAACTTAATG GCGAAGCCGC GTGGATCGCG GGCGCTATCC GCTGAGCCCT TCTCACCACC AACTGTGGAG AAGCGCACAA AGGCAGGCGT  TTGCTTGCCA ACGGTATTGA GGAAAGCGGC CTTTGTATAC TGGCTAACGT CGTGCGTGAC CTCGAAATAA CCATGCGCGC CAGCGCCCTT AGCGTGGACA ATGCGCTCAG GAATACGCTC  GCGGTTGAAG TGCGCCAGCT TCTCAACGAG ATGAAAATCT TCCAACAGCG TGGGGCCAGG ATAGCCCACG GTCAGTGAAT TCGTATTATC TGGAGCGGGG ATACCGAAAT CAGTCGTAAG 
AAAACGCTTA TCTTGTTCCG TCAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTAGGCGGTC ACTTCCAGGC CCAGGCCGGC GGCGACGCGC TGGCCGTACT CGGGATCGGC GCGGAAGAAA TGCTTCAACT GACGCTCGAC GATCTCCTTG CTCTTGACGT TGCGCATATG  ACCGACCAGG TTATTGACCA GGTGGGTCTT CTCTTCCTCG CTCATCAAGC GATAGAGCGC GCCCGGCTGC GCGAAGTCAT CATCCTTCAG CTCATAGGCG AGGCGCTCAG CGTTGCCGCT  GAAGGCATCC TGATGGTCGC CGCGATAGAA CTCGGGGGCT GCATTAGGAC CATCGAAGCT GTTCGGCTGA TAGTTGGGGG TCGCGCCACC ATTGCCATCG AAGCGCATGG CGCCGTCGCG  GCGATAGTTG TTGATCTCAA CCTGGGGACG GTTAATGGGC AGGTGCGCGT AGTTGGTGCC GACGCGATAG CGATGGGCAT CTGGATAGGC GAAGATGCGG CCCTGGAGCA TCTTGTCAGG  CGAGAAGCCG ATGCCGGGAA CGATGTTCGT CGGCGCGAAG GCGGCCTGCT CGACCTCGGC GAAGTAGTTC TCCGGGTTGC GGTTCAGCAC CAGGCGACCA ATCGGGATCA GGGGATAATC  GCTATGCAGC CAGACCTTGG TCACATCGAA GGGATCGAAG CGGTACTTCG CCGCCTCTTC CACGGGCATG ATCTGTACAG AGCAGGTCCA GGCGGCCTCT TTCCCGTTCT CGATATGCTC  GAAGAGGTCC AGGGTCGCGA AATCAGGATT GGCGCCCGCC ATGTGCGTGG CCTCGGCGTC GGTCCAGTTC TCGATGCCAG CCTCAGTCTT GAAGTGGTAC TTGACCCAGA CCGCTTTGCC  CTCGGCATTG ATCCACTTGA AGGTGTGCGA GCCAAAGCCA TCCATATGGC GGTAGGTCTT GGGTGTGCCA CGGCTGGAGA AGAGGATCGT GACCTGATGC AGCGCCTCCG GTGTCAGCGA  GATAAAGTCC CAGAAGGCGT CAGGATCCTT GGCGTTGGTC TGTGGATTGC GCTTCTGTGT GTGAATAAAG TCAGGGAATT TGATGGCGTC GCGCAGGAAG AAGACGGGCG TATTGTTACC  AACGAGATCG TAGTTGCCCT CTTCCGTGTA GAACTTAATG GCGAAGCCGC GTGGATCGCG GGCGCTATCC GCTGAGCCCT TCTCACCACC AACTGTGGAG AAGCGCACAA AGGCAGGCGT  TTGCTTGCCA ACGGTATTGA GGAAAGCGGC CTTTGTATAC TGGCTAACGT CGTGCGTGAC CTCGAAATAA CCATGCGCGC CAGCGCCCTT AGCGTGGACA ATGCGCTCAG GAATACGCTC  GCGGTTGAAG TGCGCCAGCT TCTCAACGAG ATGAAAATCT TCCAACAGCG TGGGGCCAGG ATAGCCCACG GTCAGTGAAT TCGTATTATC TGGAGCGGGG ATACCGAAAT CAGTCGTAAG 
AAAACGCTTA TCTTGTTCCG TCAT 

Retrieve as FASTA