Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
230 |
PWM (Da): |
25502.17 |
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PI (pH):
| 10.15 |
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Sequence 279
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
PNINSIRSFEVVDQIKAAVTKACKRDVVSCADILAIAARDSVAILGGKQYWYQVLLGRRDSRFASRDAANTNLPPPFFNFSQLIKNFKSHGLNLKDLVVLSGGHTIGFSKCTNFRNRIYNDTNIDKKFAANLQKTCPQIGGDNNLAPFDSTPNKVDTSFYKALLYKRGLLHSD*ELFKGDGSQSDRLVQLYSKNSYAFAYDFGVSMIKMGNLKPLTGKKGEIRCNCRKVNK |
Retrieve as FASTA
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Remarks |
Pseudogene. Incorrect prediction from Phytozome (Exon 1 and part of exon 2 are missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CCAAATATCAATTCAATTAGAAGTTTTGAGGTCGTTGATCAAATCAAAGCTGCAGTTACCAAAGCTTGCAAACGTGATGTAGTATCATGTGCAGATATTTTAGCTATAGCAGCTCGAGAT TCCGTTGCCATAGTAAGTCTTTCCAATATTTTGCACTTCTAAACAAGGTTTTAAATTGCATAACCACAATATATTGTTGCAGACTTGCAGCAATATAAAAGATTTTGAGGTCTATAACCG CAATTTTGAATACATCGACTGCATTTAACCGCGATCAAATAGTATATTTTTTCGAGTAGTGTAACTGCATTTTCAAGTAGTATATTTTTTTGGCGAATTTCGAATAGTGTATGTAACACT AGCAACTAAGAAATTTTGCTTTCATCATTTAACAGCTGGGTGGTAAGCAATATTGGTACCAAGTGTTACTAGGAAGAAGAGATTCAAGATTTGCAAGCAGAGATGCAGCAAATACAAATC TTCCTCCTCCATTCTTTAACTTCTCACAACTCATCAAAAATTTCAAGTCACATGGACTAAACCTTAAGGACTTAGTTGTTCTATCTGGTGGACACACAATTGGATTTTCCAAATGCACTA ACTTTAGAAACAGAATCTACAATGACACCAACATAGACAAAAAATTTGCAGCCAATTTGCAAAAGACATGTCCTCAAATCGGCGGCGACAATAATTTAGCGCCATTTGATTCTACTCCTA ACAAAGTTGACACATCATTTTATAAGGCTTTGTTGTATAAAAGGGGTCTCCTTCATTCTGATTAAGAGCTTTTTAAAGGTGATGGTTCTCAAAGTGATAGGTTGGTGCAACTATATAGTA AAAATTCTTATGCTTTTGCTTATGATTTTGGAGTTTCTATGATTAAGATGGGTAATTTGAAGCCTCTTACCGGTAAAAAGGGTGAGATAAGGTGCAATTGCAGAAAAGTTAACAAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CCAAATATCAATTCAATTAGAAGTTTTGAGGTCGTTGATCAAATCAAAGCTGCAGTTACCAAAGCTTGCAAACGTGATGTAGTATCATGTGCAGATATTTTAGCTATAGCAGCTCGAGAT TCCGTTGCCATACTGGGTGGTAAGCAATATTGGTACCAAGTGTTACTAGGAAGAAGAGATTCAAGATTTGCAAGCAGAGATGCAGCAAATACAAATCTTCCTCCTCCATTCTTTAACTTC TCACAACTCATCAAAAATTTCAAGTCACATGGACTAAACCTTAAGGACTTAGTTGTTCTATCTGGTGGACACACAATTGGATTTTCCAAATGCACTAACTTTAGAAACAGAATCTACAAT GACACCAACATAGACAAAAAATTTGCAGCCAATTTGCAAAAGACATGTCCTCAAATCGGCGGCGACAATAATTTAGCGCCATTTGATTCTACTCCTAACAAAGTTGACACATCATTTTAT AAGGCTTTGTTGTATAAAAGGGGTCTCCTTCATTCTGATTAAGAGCTTTTTAAAGGTGATGGTTCTCAAAGTGATAGGTTGGTGCAACTATATAGTAAAAATTCTTATGCTTTTGCTTAT GATTTTGGAGTTTCTATGATTAAGATGGGTAATTTGAAGCCTCTTACCGGTAAAAAGGGTGAGATAAGGTGCAATTGCAGAAAAGTTAACAAG |
Retrieve as FASTA
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