Entry information : MpiCIIAC[P]02
Entry ID 8481
Creation 2011-08-24 (Christophe Dunand)
Last sequence changes 2012-05-22 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-03-22 (Christophe Dunand)
Peroxidase information: MpiCIIAC[P]02
Name MpiCIIAC[P]02
Class Asco Class II type C     [Orthogroup: CIIAC001]*
Taxonomy Eukaryota Fungi Ascomycota Dothideomycetes Mycosphaerellaceae Mycosphaerella
Organism Mycosphaerella pini (Dothistroma septosporum )    [TaxId: 64363 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MpiCIIAC[P]02
start..stop
S start..stop
ZcelCIIAC03 366 3e-126 46..320 133..405
CzmCIIAC01 339 3e-117 53..320 29..295
SpopCIIAC 313 2e-106 20..319 25..330
MpopCIIAC 308 2e-104 17..319 39..346
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 882484..883444 961  
complement(join(882484..883444))


exon

Literature and cross-references MpiCIIAC[P]02
DNA ref. JGI genome:   scaffold_2 (883444..882484)
mRNA ref. JGI transcript:   isotig11079
Protein sequence: MpiCIIAC[P]02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320
PWM (Da):   %s   33237.49  
PI (pH):   %s   7.62
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
SKTSSTGSSS TKTISSSTTT TVSSSITTTS SSTTTTTSAS LTSTGCRDFW SNVVDGLAPL MRVNGQRTDM ARAAIRFAFH DSAAYSAKLH FQAPAAGGAD GPLLLSSTVI NRANNNGLSD  YHGQLTK*FS DYKALGYGLI AADLIRVAGS LGVLAWPGGR IRRVLVGRSD TNVSAPDGLM PKDFGTGSDH DTLLQLFxID KGFTAQDLAA LIGAHTTSMA NFETQNGIPA GTPQDSAPGQ 
WDVLYYNQTM FPPAGIGSFD RDVNLSKDQT STGVGRQFRS FVGNQGAWGA SFASAWQVLT LLGVPSDATA IMRDCTVVVS A 

Retrieve as FASTA  
Remarks Pseudogen (stop codon in frame). Uncorrect prediction from JGI (short sequence). EST????
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AGCAAGACTT CATCCACGGG TTCTTCGAGC ACAAAGACCA TTTCAAGCTC AACAACGACC ACAGTGTCAT CGTCAATTAC CACGACTTCC TCGTCGACCA CAACGACCAC CTCTGCTTCA  CTAACATCCA CAGGGTGTCG GGATTTCTGG TCCAATGTCG TGGACGGTTT GGCACCACTA ATGCGAGTCA ACGGCCAACG TACCGACATG GCCCGAGCAG CAATCCGTTT TGCGTTCCAC  GACTCTGCTG CCTACTCTGC CAAGCTCCAC TTCCAAGCTC CGGCAGCAGG TGGCGCCGAC GGTCCTCTAC TCCTCTCAAG CACCGTAATC AATCGTGCAA ATAACAACGG CCTAAGTGAC  TACCATGGCC AACTCACCAA GTAGTTCTCC GACTACAAAG CCCTCGGCTA TGGTCTTATC GCCGCGGATC TAATCCGAGT CGCTGGCAGT CTCGGCGTCC TCGCATGGCC TGGAGGCCGC  ATTAGAAGAG TTTTAGTCGG TCGCTCCGAC ACGAACGTCT CAGCACCCGA TGGTCTGATG CCGAAAGATT TCGGCACAGG TTCCGATCAC GACACTCTCC TCCAACTGTT TCnnATCGAC  AAGGGATTCA CAGCGCAAGA TCTCGCCGCT CTGATTGGAG CGCACACGAC CTCAATGGCA AACTTTGAAA CGCAGAATGG TATTCCTGCC GGTACGCCGC AAGATAGTGC GCCGGGACAG  TGGGATGTCC TTTATTACAA TCAGACCATG TTCCCGCCAG CGGGAATTGG CAGTTTCGAC CGTGATGTCA ATCTTAGTAA GGACCAGACT TCAACAGGTG TTGGGAGGCA GTTTAGGAGC  TTCGTGGGGA ATCAGGGTGC TTGGGGCGCG AGTTTTGCGA GTGCATGGCA GGTGTTGACG TTGCTTGGGG TACCGAGTGA TGCGACTGCG ATCATGAGAG ATTGTACTGT GGTCGTCAGC 
GCT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AGCAAGACTT CATCCACGGG TTCTTCGAGC ACAAAGACCA TTTCAAGCTC AACAACGACC ACAGTGTCAT CGTCAATTAC CACGACTTCC TCGTCGACCA CAACGACCAC CTCTGCTTCA  CTAACATCCA CAGGGTGTCG GGATTTCTGG TCCAATGTCG TGGACGGTTT GGCACCACTA ATGCGAGTCA ACGGCCAACG TACCGACATG GCCCGAGCAG CAATCCGTTT TGCGTTCCAC  GACTCTGCTG CCTACTCTGC CAAGCTCCAC TTCCAAGCTC CGGCAGCAGG TGGCGCCGAC GGTCCTCTAC TCCTCTCAAG CACCGTAATC AATCGTGCAA ATAACAACGG CCTAAGTGAC  TACCATGGCC AACTCACCAA GTAGTTCTCC GACTACAAAG CCCTCGGCTA TGGTCTTATC GCCGCGGATC TAATCCGAGT CGCTGGCAGT CTCGGCGTCC TCGCATGGCC TGGAGGCCGC  ATTAGAAGAG TTTTAGTCGG TCGCTCCGAC ACGAACGTCT CAGCACCCGA TGGTCTGATG CCGAAAGATT TCGGCACAGG TTCCGATCAC GACACTCTCC TCCAACTGTT TCnnATCGAC  AAGGGATTCA CAGCGCAAGA TCTCGCCGCT CTGATTGGAG CGCACACGAC CTCAATGGCA AACTTTGAAA CGCAGAATGG TATTCCTGCC GGTACGCCGC AAGATAGTGC GCCGGGACAG  TGGGATGTCC TTTATTACAA TCAGACCATG TTCCCGCCAG CGGGAATTGG CAGTTTCGAC CGTGATGTCA ATCTTAGTAA GGACCAGACT TCAACAGGTG TTGGGAGGCA GTTTAGGAGC  TTCGTGGGGA ATCAGGGTGC TTGGGGCGCG AGTTTTGCGA GTGCATGGCA GGTGTTGACG TTGCTTGGGG TACCGAGTGA TGCGACTGCG ATCATGAGAG ATTGTACTGT GGTCGTCAGC 
GCT 

Retrieve as FASTA