1. Browse the Database
  2. View Redoxidase
Entry information : HanCIIBB02 (HanMnP02 / mnp5)
Entry ID 8495
Creation 2011-09-15 (Christophe Dunand)
Last sequence changes 2011-09-15 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-23 (Catherine Mathe (Scipio))
Peroxidase information: HanCIIBB02 (HanMnP02 / mnp5)
Name (synonym) HanCIIBB02 (HanMnP02 / mnp5)
Class Other class II peroxidase type B    [Orthogroup: CIIBB001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Bondarzewiaceae Heterobasidion
Organism Heterobasidion annosum (root rot fungus)    [TaxId: 13563 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HanCIIBB02
start..stop		 S start..stop
PstrCIIBB02 584 0 1..356 1..359
HanCIIBB01 573 0 1..356 1..361
HanCIIBB07 566 0 1..356 1..361
HanCIIBB05 565 0 1..356 1..361
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 521008..521059 50 N° 2 521115..521310 194 N° 3 521367..521498 130 N° 4 521556..521677 120
N° 5 521731..521806 74 N° 6 521856..521981 124 N° 7 522039..522118 78 N° 8 522176..522211 34
N° 9 522265..522437 171 N° 10 522489..522553 63 N° 11 522612..522624 11  
join(521008..521059,521115..521310,521367..521498,521556..521677,521731..521806, 521856..521981,522039..522118,522176..522211,522265..522437,522489..522553,52261 2..522624)


exon

Literature and cross-references HanCIIBB02 (HanMnP02 / mnp5)
DNA ref. JGI genome:   scaffold_06 (521008..522624)
Cluster/Prediction ref. JGI gene:   6364
Protein sequence: HanCIIBB02 (HanMnP02 / mnp5)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   356 (338)
PWM (Da):   %s   37085.97 (35237.0) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.06 (4.06) Peptide Signal:   %s   cut: 19 range:19-356
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFQTLACFLALIAVANAAITRRVACPDGINTATNAACCALFAVR
DDIQTNLFDGGECGEEVHESLRLTFHDAIGFSTTKNVGGGADGSISTFSDIETNFHANNGIDEIVEEQRPFVAAHNMTAGDFIQFAGAIGVSNCPGAPRLEFFFGRPTAIAPAADLTVPEPDTVDSILARFSDAGFTTAE
VVALLASHTIAAADHVDPTIPGTPFDSTPSTFDTQFFVETQLRGTLFPGTGGNQGEVESPLAGEIRLQSDSELADSRTACLWQANVNQQTHMANSFAAAMAKLAVLGHNTADMIDCSELI
PTPPPFANVATFPAGINSNDVEQCATTPFPTLGTDPGPVTSVAPVPPS

Retrieve as FASTA  
Remarks Complete sequence from genomic (10 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCCAGACACTAGCCTGCTTCCTTGCTCTCATCGCTGTTGCAAATGTGGTGGGTACAGAGATTGACGCGATACTTGAATCGCGCTGACCGAATTTTACGACAGCTGCCATCACT
AGGCGTGTTGCTTGTCCCGATGGTATCAACACCGCTACAAACGCGGCATGCTGCGCGTTGTTTGCTGTCCGTGACGACATCCAGACAAACCTGTTTGATGGTGGCGAATGCGGTGAGGAG
GTGCACGAATCCCTCCGCCTGACCTTCCACGACGCGATCGGTTTCTCGACTACAAAGAATGTTGGGGGTTAGTGCAAGTTTTTCTCCTGAAGAAAAACCTCACCTATCATATCGTCGTGA
TAGTGGTGGTGCCGACGGCTCGATATCAACATTCTCCGACATCGAGACCAACTTCCATGCCAACAACGGCATCGATGAAATTGTTGAGGAACAAAGACCGTTCGTTGCTGCGCACAATAT
GACCGCCGGAGATTTTTGTGAGCACCGTGTATATGCAGCTTTGATGTCCTAGACTCACTGAAACATTTCTATAGCATCCAATTTGCAGGCGCTATTGGTGTTAGTAACTGCCCTGGTGCT
CCTCGGCTGGAATTCTTTTTTGGTCGTCCCACAGCGATAGCTCCGGCCGCCGATCTGACTGTCCCAGAGCCTTTTGTGGTTGGTCTCAACGCTTTGTTTTTCCCCAATCCCTGACACGGT
TCCATTTGCAGATACCGTCGACAGCATTCTCGCCCGTTTCAGTGACGCTGGCTTCACCACAGCTGAAGTTGTCGCCCTCCTTGCCTCTCGTAAGCGATAAATACTTTGGCCTAACTTATT
TGCTCATTCATGATGAAGCCACACGATCGCCGCGGCCGATCACGTTGACCCAACCATCCCTGGAACGCCATTCGACTCGACTCCGTCCACGTTCGACACTCAATTCTTTGTTGAGACCCA
GCTTCGTGGAACACTCTTCCCAGGGGGTACGACCATCTTGATCTAAGAAATTACTGCGCGGCTAATGTTTTGGTCTGGCATAGAACGGGTGGGAACCAGGGCGAGGTAGAGTCGCCTTTG
GCGGGCGAGATTCGGCTGCAGTCCGATTCAGAGCTGGCTAGAGAGGTCTGTCGTGAGATCACCTCAAAGGATTTTCGCTGGCTTACGTACCATCCAACCTAGACTCTCGCACCGCTTGCC
TATGGCAAGCCAATGTCACAGTGAGTATATATTGTGTACTATCCCGTTAGCTAGAAGTGACAACATTCTACAGACCAGCAGACTCACATGGCCAACTCTTTTGCTGCGGCGATGGCAAAG
TTGGCTGTCCTCGGTCACAACACGGCTGACATGATTGACTGCTCGGAGCTGATCCCTACGCCTCCGCCCTTCGCCAACGTTGCCACCTTCCCAGCTGGGATCAACTCCAACGATGTAGAA
CAAGCGCGGTACGTCGTTTGAATTCTCAATGTAATTGTCTGGCTGACAGATAACTTCAGTGTGCCACTACTCCTTTCCCAACTCTCGGCACCGATCCTGGCCCAGTTACCTCGGTTGCCC
CAGTGTGTAAGTTTTATTTTACTAACTTATGGAGCGTATATGTCTAACAATTTTTTTTCTATAGCCCTCCTTCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCCAGACACTAGCCTGCTTCCTTGCTCTCATCGCTGTTGCAAATGCTGCCATCACTAGGCGTGTTGCTTGTCCCGATGGTATCAACACCGCTACAAACGCGGCATGCTGCGCG
TTGTTTGCTGTCCGTGACGACATCCAGACAAACCTGTTTGATGGTGGCGAATGCGGTGAGGAGGTGCACGAATCCCTCCGCCTGACCTTCCACGACGCGATCGGTTTCTCGACTACAAAG
AATGTTGGTGGTGGTGCCGACGGCTCGATATCAACATTCTCCGACATCGAGACCAACTTCCATGCCAACAACGGCATCGATGAAATTGTTGAGGAACAAAGACCGTTCGTTGCTGCGCAC
AATATGACCGCCGGAGATTTCATCCAATTTGCAGGCGCTATTGGTGTTAGTAACTGCCCTGGTGCTCCTCGGCTGGAATTCTTTTTTGGTCGTCCCACAGCGATAGCTCCGGCCGCCGAT
CTGACTGTCCCAGAGCCTTTTGATACCGTCGACAGCATTCTCGCCCGTTTCAGTGACGCTGGCTTCACCACAGCTGAAGTTGTCGCCCTCCTTGCCTCCCACACGATCGCCGCGGCCGAT
CACGTTGACCCAACCATCCCTGGAACGCCATTCGACTCGACTCCGTCCACGTTCGACACTCAATTCTTTGTTGAGACCCAGCTTCGTGGAACACTCTTCCCAGGAACGGGTGGGAACCAG
GGCGAGGTAGAGTCGCCTTTGGCGGGCGAGATTCGGCTGCAGTCCGATTCAGAGCTGGCTAGAGACTCTCGCACCGCTTGCCTATGGCAAGCCAATGTCAACCAGCAGACTCACATGGCC
AACTCTTTTGCTGCGGCGATGGCAAAGTTGGCTGTCCTCGGTCACAACACGGCTGACATGATTGACTGCTCGGAGCTGATCCCTACGCCTCCGCCCTTCGCCAACGTTGCCACCTTCCCA
GCTGGGATCAACTCCAACGATGTAGAACAAGCGTGTGCCACTACTCCTTTCCCAACTCTCGGCACCGATCCTGGCCCAGTTACCTCGGTTGCCCCAGTCCCTCCTTCTTAA

Retrieve as FASTA