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Entry information : ShirCIIBC06
Entry ID 8506
Creation 2011-09-20 (Christophe Dunand)
Last sequence changes 2011-09-20 (Christophe Dunand)
Sequence status complete
Reviewer Nizar Fawal
Last annotation changes 2012-10-26 (Nizar Fawal)
Peroxidase information: ShirCIIBC06
Name ShirCIIBC06
Class Other class II peroxidase type C    [Orthogroup: CIIBC001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Stereaceae Stereum
Organism Stereum hirsutum    [TaxId: 40492 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ShirCIIBC06
start..stop		 S start..stop
ShirCIIBC04 593 0 1..352 1..358
ShirCIIBC05 563 0 1..349 1..350
ShirCIIBC03 548 0 1..352 1..357
ShirCIIBC02 534 0 1..352 1..360
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8506' 'join(617766..617892,617945..618009,618077..618135,618251..618306,618416..618616,618681..618726,618786..618834,618966..619006,619063..619113,619164..619279,619331..619422,619481..619558,619616..619680,619738..619750)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 617766..617892 125 N° 2 617945..618009 63 N° 3 618077..618135 57 N° 4 618251..618306 54
N° 5 618416..618616 199 N° 6 618681..618726 44 N° 7 618786..618834 47 N° 8 618966..619006 39
N° 9 619063..619113 49 N° 10 619164..619279 114 N° 11 619331..619422 90 N° 12 619481..619558 76
N° 13 619616..619680 63 N° 14 619738..619750 11  
join(617766..617892,617945..618009,618077..618135,618251..618306,618416..618616, 618681..618726,618786..618834,618966..619006,619063..619113,619164..619279,61933 1..619422,619481..619558,619616..619680,619738..619750)


exon

Literature and cross-references ShirCIIBC06
DNA ref. JGI genome:   scaffold_17 (617766..619750)
Cluster/Prediction ref. JGI gene:   7801
Protein sequence: ShirCIIBC06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   352 (330)
PWM (Da):   %s   36760.19 (34664.0)  
PI (pH):   %s   4.18 (4.14) Peptide Signal:   %s   cut: 23 range:23-352
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFAQLSAIVALALGAAQVAKAAPPPKVTCADGNVTANAVCCQLFPVVANLQQNLFDGAQCGEAHSALRLSFHDAIGFSLTRKGGGADGSILVFNATEEAHHHSRIDEITADQFPVFQTTNLSAGDFVHLAAAVGTANCPGAPQLDFFFGRAPPLGPAADLT
VPEPTDNVTAILARFADAGFAPDEVVALLSSHTVAATIPGTPFDTTPFTFDTQFFVETLLVGTLFPGNGSQAGEVLSPIPGEMRLFSDSVLARDPRTACMWQEMNDQTRMQTLFKAAMHK
LELLGQPDTLVDCSVVPVPAPFTGSAVFPATFNMSDIQQACDTVPFPTLETLPGPETSVPPVPGS

Retrieve as FASTA  
Remarks Complete sequence from genomic (13 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCGCTCAGCTCTCTGCCATCGTCGCTCTCGCTCTCGGCGCCGCTCAGGTCGCCAAGGCTGCACCCCCGCCGAAGGTTACCTGCGCTGACGGAAACGTCACCGCAAACGCCGTC
TGCTGCCCCGTTAGTTGCCCTTCCTACGGCGTTCTACTCCTCGACTGACGACCTTGTTTAGAGCTCTTCCCTGTTGTGGCTAACCTTCAGCAGAATTTGTTCGACGGTGCTCAATGCGGT
GAAGAGAGGTTTGTGTCATTTTTCTTCTTGGATCTGCCTTGAAATTTACTGTTTACTGTTTTTTTTTGGTGTTAGGCCCACTCTGCTCTTCGTCTGTCGTTCCACGACGCTATTGGATTT
TCCCTCACCCGTAAAAGCACCGTTTTTCTCCCAGAGCAAGCCTAGTCTGTTGCTGACCGTACCAACAGGCGATGTGTTAGTTCTGCTTAAAGGCATCTTCACTGAGGCTGCTAATCGAAT
TGTATTACCAGGGGTGGAGGAGCTGACGGTTCTATTTTGGTCTTTAACGCCACTGAAGAGGCATTTCTCGTAAGCATCGGTATCCACACTTCATGTAAGCACGTACTGATGAACATCCTG
TAGACGCCAACATTGGGTGAGTCGGTATTATGGAGCCTTGCACTGTGTACTAACCGAGACCATCACTCCAGGATCGACGAGATCACCGCCGATCAATTCCCTGTCTTCCAGACCACTAAT
CTCTCTGCTGGAGACTTCGTCCATTTGGCGGCTGCTGTCGGCACGGCGAACTGCCCAGGTGCTCCTCAGTTGGACTTCTTCTTCGGTCGGGCCCCTCCCTTGGGCCCCGCTGCTGATTTG
ACCGTTCCGGAGCCTACTGTGGTAAGCTTTTATTTCGGAATGCGCGTGGAGCCAAAAGACTGACTCAGTTGGGCTTCGTCTCCAGACAACGTCACCGCCATCTTGGCTAGGTTCGCCGAT
GCCGGGTTTGCGCGTATGTGCACATCCCTTGAGTAGGTTTGGTGGACTAGAAGCTCACTAACCCTTTGATAGCCCCGACGAGGTTGTTGCACTCCTGTCTTCCCACACCGTGGCGGCTGC
GCGGTATGCAACAGTATTTTCTATGTACGCCATTTCAAGGGCTGACATGATGTGCGCTGTAGGACGAGATCGACACGGTAGGTAGTTGATCACTACGAATTACAGGCACCTGCTCACATT
TTCTTGTAAATTAGACTATCCCAGGAACTCCGTTTGACACGACGCCTTTCACCTTTTGTGAGCAATGCTTTTATATGACACAGAAACCGCCCGTAACAAGATGTAATTCATAGCGACACT
CAGTTCTTCGTTGAGACCTTGCTGGTCGGCACATTGTTCCCTGGGGGTACGTATCCTCCTCACGGTAAGGATGCGACTCCTAACATGTTTTTGTAGCAACGGCTCGCAAGCTGGTGAAGT
GCTGTCGCCCATCCCCGGAGAGATGCGTCTTTTTAGTGACTCCGTTCTCGCTCGTGACCCACGGACGGCCTGCATGTGGCAGGAGATGATCACAGTAAGCCTCCGAAACCTTCGCAATGC
GTACCACCTCTGACATAAGCTATAGACGACCAGACTCGCATGCAGACCCTTTTCAAGGCTGCTATGCACAAGCTTGAGCTTCTTGGTCAGCCCGACACCCTCGTCGACTGCTCCGATATG
TTCGTTTATATTTCCATATGATCGCTTCTGTTCTCTTGACCATAACTCGCTCTCTAGGTTGTTCCTGTTCCCGCCCCATTCACTGGTTCTGCCGTCTTCCCCGCCACTTTCAACATGAGT
GACATCCAGCAAGCTCTGTCAGTTCTTCAGCCTATCTAACTCCATGAAATCATGCTCATCAAGCTGTTTTACAGTGCGATACCGTGCCGTTCCCGACCCTCGAGACCCTCCCTGGCCCCG
AGACCTCAGTCCCGCCCGTGTGTAAGCACGTCCGTCTGTATTCGTTATTGCACTGTCTGATCGCAGTTTTGTCGATAGTCCCGGCTCTTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCGCTCAGCTCTCTGCCATCGTCGCTCTCGCTCTCGGCGCCGCTCAGGTCGCCAAGGCTGCACCCCCGCCGAAGGTTACCTGCGCTGACGGAAACGTCACCGCAAACGCCGTC
TGCTGCCAGCTCTTCCCTGTTGTGGCTAACCTTCAGCAGAATTTGTTCGACGGTGCTCAATGCGGTGAAGAGGCCCACTCTGCTCTTCGTCTGTCGTTCCACGACGCTATTGGATTTTCC
CTCACCCGTAAGGGTGGAGGAGCTGACGGTTCTATTTTGGTCTTTAACGCCACTGAAGAGGCATTTCACCATCACTCCAGGATCGACGAGATCACCGCCGATCAATTCCCTGTCTTCCAG
ACCACTAATCTCTCTGCTGGAGACTTCGTCCATTTGGCGGCTGCTGTCGGCACGGCGAACTGCCCAGGTGCTCCTCAGTTGGACTTCTTCTTCGGTCGGGCCCCTCCCTTGGGCCCCGCT
GCTGATTTGACCGTTCCGGAGCCTACTGACAACGTCACCGCCATCTTGGCTAGGTTCGCCGATGCCGGGTTTGCCCCCGACGAGGTTGTTGCACTCCTGTCTTCCCACACCGTGGCGGCT
GCGACTATCCCAGGAACTCCGTTTGACACGACGCCTTTCACCTTCGACACTCAGTTCTTCGTTGAGACCTTGCTGGTCGGCACATTGTTCCCTGGCAACGGCTCGCAAGCTGGTGAAGTG
CTGTCGCCCATCCCCGGAGAGATGCGTCTTTTTAGTGACTCCGTTCTCGCTCGTGACCCACGGACGGCCTGCATGTGGCAGGAGATGATCAACGACCAGACTCGCATGCAGACCCTTTTC
AAGGCTGCTATGCACAAGCTTGAGCTTCTTGGTCAGCCCGACACCCTCGTCGACTGCTCCGATGTTGTTCCTGTTCCCGCCCCATTCACTGGTTCTGCCGTCTTCCCCGCCACTTTCAAC
ATGAGTGACATCCAGCAAGCTTGCGATACCGTGCCGTTCCCGACCCTCGAGACCCTCCCTGGCCCCGAGACCTCAGTCCCGCCCGTTCCCGGCTCTTAG

Retrieve as FASTA