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Entry information : TvCIIBB01 (MnP5-short)
Entry ID 8533
Creation 2011-09-23 (Christophe Dunand)
Last sequence changes 2012-04-02 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-02 (Christophe Dunand)
Peroxidase information: TvCIIBB01 (MnP5-short)
Name (synonym) TvCIIBB01 (MnP5-short)
Class Other class II peroxidase type B    [Orthogroup: CIIBB001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Coriolaceae Trametes
Organism Trametes versicolor (Coriolus versicolor )    [TaxId: 5325 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TvCIIBB01
start..stop		 S start..stop
TvCIIBB01_PRL572 733 0 1..365 1..365
GsppCIIBB07 603 0 1..365 1..365
TvCIIBB02 573 0 1..365 1..365
TvCIIBB02_IFO30340 573 0 1..365 1..365
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8533' 'complement(join(2438662..2438674,2438733..2438797,2438853..2438927,2438986..2439083,2439140..2439185,2439239..2439308,2439356..2439481,2439545..2439623,2439682..2439735,2439791..2439858,2439911..2440045,2440102..2440309,2440361..2440421))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2440361..2440421 59 N° 2 2440102..2440309 206 N° 3 2439911..2440045 133 N° 4 2439791..2439858 66
N° 5 2439682..2439735 52 N° 6 2439545..2439623 77 N° 7 2439356..2439481 124 N° 8 2439239..2439308 68
N° 9 2439140..2439185 44 N° 10 2438986..2439083 96 N° 11 2438853..2438927 73 N° 12 2438733..2438797 63
N° 13 2438662..2438674 11  
complement(join(2438662..2438674,2438733..2438797,2438853..2438927,2438986..2439 083,2439140..2439185,2439239..2439308,2439356..2439481,2439545..2439623,2439682. .2439735,2439791..2439858,2439911..2440045,2440102..2440309,2440361..2440421))


exon

Literature and cross-references TvCIIBB01 (MnP5-short)
DNA ref. JGI genome:   scaffold_2 (2440421..2442180)
Protein sequence: TvCIIBB01 (MnP5-short)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   365 (344)
PWM (Da):   %s   38057.61 (35965.5)  
PI (pH):   %s   4.08 (4.04) Peptide Signal:   %s   cut: 22 range:22-365
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFKTLASFVSVLAALQVASGALTRRVACPDGVNTATNAACCQLF
AVRDDIQKNLFDNGECGEDVHESLRLTFHDAIGFSRSAEANGTFGGGGADGSISIFASIETNFHASLGIDEIVGEQAPFIARHNISVGDFIQFAGAVGVSNCPGAPRLQFLGRPNATQPAPDKTIPEPFDTVDSILARFLDAAD
FSPAEVVALLASHTIAAADEVDPTIPGTPFDSTPELFDTQFFIETQLRGTGFPGTAGNQGEVLSPLPGEMRLQSDSLARDSRTACEWQSMVNNQSKMMTAFAAAMAKLAVIGQDVSQLID
CSEIPMPPPPASAAHFPAGLSNADVEQACAETPFPTLQTDPGPETSVAPVPPS

Retrieve as FASTA  
Remarks Complete sequence from genomic (12 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCAAGACACTTGCGAGCTTCGTCTCTGTCCTTGCCGCCCTCCAGGTCGCCAGCGGTCTGTTCTTCTCCTTCTCTACTCGTTTTCAACCTGCTGACATTGCACCAGGTGTGCCC
TTACCCGCCGGGTCGCTTGCCCCGACGGCGTGAACACGGCTACCAACGCGGCGTGCTGCCAGCTCTTCGCCGTCCGCGATGACATCCAGAAGAACCTGTTCGACAACGGCGAGTGCGGTG
AGGACGTCCACGAGTCCCTCCGTCTCACCTTCCACGACGCCATTGGCTTCTCCCGCTCTGCGGAGGCTAACGGCACCTTCGGGTGGGTCCATACACCTATCACGACGTCGAAGCGTTGCT
GAATCCTTCTCTTCACAGCGCGGCGGCGGCGCGGACGGCTCGATCTCCATCTTCGCGTCCATCGAGACCAACTTCCACGCGAGTCTTGGTATCGACGAGATCGTCGGCGAGCAGGCACCT
TTCATTGCCCGCCACAACATCAGCGTCGGCGACTTGTACGTCTTCTACTGCTATATCTCGAACCTCTCCTAACACAAAGTCGTGCAGCACATCCAGTTCGCTGGAGCCGTCGGTGTCAGC
AACTGCCCTGGCGCCCCGCGCCTGCAGTTCCTGCTTGGTGGGTTACCAACTCTCCAAAGCCTTGGTTCTTTACTGAGCCGCGTCTATCCCAGGCGCCGTCCTAACGCCACTCAGCCCGCG
CCCGACAAGACCATCCCGGAGCCGTTCGGTAGGAATCAAGAAACGGCGTGGCCTGTAAGGAGTTACTGACGCGTTCGCAACACTAGACACACCGTTGATAGTATTCTCGCCCGTTTCTTG
GACGCCGCTGACTTCAGCCCGGCGGAGGTCGTCGCTCTGCTTGCGTCGTATGTACCCTTCGAGCTCGTCGTTTCATTCTAACACTGACGCGCACGCTCACACATCAACAGGCGCACACCA
TCGCTGCGGCCGACGAGGTCGACCCGACGATTCCCGGAACGCCCTTTGACTCCACGCCCGAGCTTTTCGACACCCAGTTCTTCATCGAGACTCAGCTGCGCGGCACTGGGTTCCCTGGGT
ACGCTGTCCTGTGCTATGACGCGGAACGTTACTGATGTAGAGCAGAAAACGGCCGGCAACCAGGGTGAGGTCTTGTCCCCTCTTCCCGGAGAGATGCGCCTGCAGTCCGACTCTGAGGTA
AGATCACGCCTCGGCGGTTGTATGCGCGGACTCAACAAATTTCTTTCTAGCTCTCGCTCGTGACTCTCGGACTGCCTGCGAGTGGCAGTCCATGGTCAGTAAGTATTGCTCAATTTCTCT
ATACTAGACTATGTCCTGACTCGTATTTCACCAGACACAACCAGTCCAAGATGATGACTGCCTTCGCGGCTGCCATGGCTAAGCTCGCAGTTATCGGCCAGGACGTCAGCCAGTTGATCG
ACTGCTCTGAAGTGGTGGGTTCTCACACGTACCTTGCTGCTCTGACACATTGACCAATGTTTTCGCGAATAGATATCCCGATGCCGCCGCCCCCGGCGAGCGCCGCGCACTTCCCCGCCG
GACTCAGCAACGCGGACGTCGAGCAGGCTGTGCGTGTTTCGATGTTGATGTTCTTCCCCATGTTGCTCACGTATGCCGATTTAGTGTGCGCCGAGACACCCTTCCCGACTCTCCAGACCG
ACCCCGGACCCGAGACCTCGGTGGCCCCGGTGTAAGTGACTCCAATGCTATCTCACCTGCTAGGCTCTAACTCCTGGATCTCTCTCTAGCCCCCCCCGTCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCAAGACACTTGCGAGCTTCGTCTCTGTCCTTGCCGCCCTCCAGGTCGCCAGCGGTGCCCTTACCCGCCGGGTCGCTTGCCCCGACGGCGTGAACACGGCTACCAACGCGGCG
TGCTGCCAGCTCTTCGCCGTCCGCGATGACATCCAGAAGAACCTGTTCGACAACGGCGAGTGCGGTGAGGACGTCCACGAGTCCCTCCGTCTCACCTTCCACGACGCCATTGGCTTCTCC
CGCTCTGCGGAGGCTAACGGCACCTTCGGCGGCGGCGGCGCGGACGGCTCGATCTCCATCTTCGCGTCCATCGAGACCAACTTCCACGCGAGTCTTGGTATCGACGAGATCGTCGGCGAG
CAGGCACCTTTCATTGCCCGCCACAACATCAGCGTCGGCGACTTCATCCAGTTCGCTGGAGCCGTCGGTGTCAGCAACTGCCCTGGCGCCCCGCGCCTGCAGTTCCTGCTTGGCCGTCCT
AACGCCACTCAGCCCGCGCCCGACAAGACCATCCCGGAGCCGTTCGACACCGTTGATAGTATTCTCGCCCGTTTCTTGGACGCCGCTGACTTCAGCCCGGCGGAGGTCGTCGCTCTGCTT
GCGTCGCACACCATCGCTGCGGCCGACGAGGTCGACCCGACGATTCCCGGAACGCCCTTTGACTCCACGCCCGAGCTTTTCGACACCCAGTTCTTCATCGAGACTCAGCTGCGCGGCACT
GGGTTCCCTGGAACGGCCGGCAACCAGGGTGAGGTCTTGTCCCCTCTTCCCGGAGAGATGCGCCTGCAGTCCGACTCTGAGCTCGCTCGTGACTCTCGGACTGCCTGCGAGTGGCAGTCC
ATGGTCAACAACCAGTCCAAGATGATGACTGCCTTCGCGGCTGCCATGGCTAAGCTCGCAGTTATCGGCCAGGACGTCAGCCAGTTGATCGACTGCTCTGAAGTGATCCCGATGCCGCCG
CCCCCGGCGAGCGCCGCGCACTTCCCCGCCGGACTCAGCAACGCGGACGTCGAGCAGGCTTGCGCCGAGACACCCTTCCCGACTCTCCAGACCGACCCCGGACCCGAGACCTCGGTGGCC
CCGGTCCCCCCGTCTTAA

Retrieve as FASTA